BLASTX nr result

ID: Glycyrrhiza24_contig00018084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018084
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-l...    64   1e-08
ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-l...    63   2e-08
ref|XP_003609879.1| tRNA pseudouridine synthase family protein [...    57   2e-06
ref|XP_003609878.1| tRNA pseudouridine synthase family protein [...    57   2e-06

>ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 309

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +1

Query: 124 HGVKPIIQDGYKWRLVLAYDGTRYAGWQYQQS 219
           HGVKPI QD YKWRLVLAYDGT+YAGWQYQQS
Sbjct: 17  HGVKPI-QDWYKWRLVLAYDGTKYAGWQYQQS 47


>ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 327

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +1

Query: 124 HGVKPIIQDGYKWRLVLAYDGTRYAGWQYQQS 219
           HGVK +IQDGYKWR+VLAYDGT+YAGWQYQ+S
Sbjct: 35  HGVK-LIQDGYKWRIVLAYDGTQYAGWQYQES 65


>ref|XP_003609879.1| tRNA pseudouridine synthase family protein [Medicago truncatula]
           gi|355510934|gb|AES92076.1| tRNA pseudouridine synthase
           family protein [Medicago truncatula]
          Length = 322

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 130 VKPIIQDGYKWRLVLAYDGTRYAGWQYQQS 219
           VKP  QDGYKWRL+L+YDGTRYAGWQYQ+S
Sbjct: 35  VKPN-QDGYKWRLLLSYDGTRYAGWQYQES 63


>ref|XP_003609878.1| tRNA pseudouridine synthase family protein [Medicago truncatula]
           gi|355510933|gb|AES92075.1| tRNA pseudouridine synthase
           family protein [Medicago truncatula]
          Length = 350

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 130 VKPIIQDGYKWRLVLAYDGTRYAGWQYQQS 219
           VKP  QDGYKWRL+L+YDGTRYAGWQYQ+S
Sbjct: 63  VKPN-QDGYKWRLLLSYDGTRYAGWQYQES 91


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