BLASTX nr result

ID: Glycyrrhiza24_contig00018075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018075
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516414.1| PREDICTED: uncharacterized protein LOC100814...   145   4e-33
ref|XP_002526707.1| Protein SCAR2, putative [Ricinus communis] g...    71   8e-11
ref|XP_003623483.1| Protein SCAR2 [Medicago truncatula] gi|35549...    68   7e-10
ref|XP_002309170.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003551590.1| PREDICTED: protein SCAR2-like [Glycine max]        62   6e-08

>ref|XP_003516414.1| PREDICTED: uncharacterized protein LOC100814240 [Glycine max]
          Length = 1694

 Score =  145 bits (365), Expect = 4e-33
 Identities = 80/119 (67%), Positives = 93/119 (78%), Gaps = 2/119 (1%)
 Frame = -2

Query: 352 SFRRGGD-EHVELQAHFSDSQSFGNSSMTDENSSFKKDRSYFPHSDSLSTVVENIHSEPI 176
           SFRR G+ +H E QAHFSDSQS G+SS +DEN  FKKD+SY PHSDSL+T VENI SEPI
Sbjct: 484 SFRRDGNGQHREPQAHFSDSQSVGSSSTSDEN--FKKDKSYLPHSDSLTTAVENIQSEPI 541

Query: 175 LFGTSKYYEPKIEDATTNQLPQIGEFQYTESGKFVMHDDAHDHEEEI-SDSGLASSDLL 2
           LF  +K  E K+EDA +NQLPQ  EFQ+T+  +FVMHDDA  HEEEI SD G ASSDL+
Sbjct: 542 LFTNAKCCELKVEDAPSNQLPQNVEFQHTDCERFVMHDDAPVHEEEISSDLGQASSDLM 600


>ref|XP_002526707.1| Protein SCAR2, putative [Ricinus communis]
           gi|223534007|gb|EEF35729.1| Protein SCAR2, putative
           [Ricinus communis]
          Length = 1471

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 6/113 (5%)
 Frame = -2

Query: 334 DEHVELQAHFSDSQSFGNSSMTDE-NSSFKKDRSYFPHSDSLSTVVENIHSE----PILF 170
           +EH++++A+FSDSQSFGNSS +D+   SFKK R  F +SDS S V ENI S+      +F
Sbjct: 429 EEHLDIRANFSDSQSFGNSSTSDDGKGSFKKGRPSFSYSDSHSNVAENIQSDIEGAVEVF 488

Query: 169 GTSKYYEPKIEDATTNQLPQIGEFQYTESGKFVMH-DDAHDHEEEISDSGLAS 14
            +S+ Y  +I D+  +Q     E    +S + +++ ++ ++ EE I ++G AS
Sbjct: 489 PSSENYAAEIADSPLDQPSLCAENIGIQSSELIVYNNNTYNEEETIPNTGEAS 541


>ref|XP_003623483.1| Protein SCAR2 [Medicago truncatula] gi|355498498|gb|AES79701.1|
           Protein SCAR2 [Medicago truncatula]
          Length = 1495

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 24/133 (18%)
 Frame = -2

Query: 337 GDEHVELQAHFSDSQSFGNSSMTDENSSFKKDRS--------YFPHSDSLSTVV------ 200
           G+E  +LQA FSDSQSFG+SS+++E SSF++DRS          P S S  T        
Sbjct: 425 GEEEHQLQAQFSDSQSFGDSSLSEEISSFEQDRSEEHDEVPARLPDSHSAGTYCASDDHS 484

Query: 199 ------ENIHSEP-ILFGTSKYY---EPKIEDATTNQLPQIGEFQYTESGKFVMHDDAHD 50
                    H++P   F  S+       + E+ ++NQLP   E Q T    F  +DDAHD
Sbjct: 485 LFQRDSNEEHTQPQAQFSDSQSIGNSSSETENMSSNQLPHTVESQKTCDEFFSHYDDAHD 544

Query: 49  HEEEISDSGLASS 11
           +   ISDSG  SS
Sbjct: 545 NGRAISDSGSVSS 557


>ref|XP_002309170.1| predicted protein [Populus trichocarpa] gi|222855146|gb|EEE92693.1|
           predicted protein [Populus trichocarpa]
          Length = 1465

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 47/116 (40%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
 Frame = -2

Query: 334 DEHVELQAHFSDSQSFGNSSMTD-ENSSFKKDRSYFPHSDSLSTVVENIHSE-------- 182
           +E ++ QA+FSDSQS GNSS+++  NSSFKK  S F +SD+LS V EN  S+        
Sbjct: 444 EEQLDAQANFSDSQSIGNSSLSEGGNSSFKKGTSSFSYSDTLSNVAENTASDGEGAGKWF 503

Query: 181 PILFGTSKYYEPKIEDATTNQLPQIGEFQYTESGKFVMHDDAHDHEEEISDSGLAS 14
           P +  T   Y   I D  ++      E   TES   V  +D    E++I DSG AS
Sbjct: 504 PSISSTEN-YPRDIADLPSDSPSVFVESGITESHHLVTFNDT--EEDKIPDSGEAS 556


>ref|XP_003551590.1| PREDICTED: protein SCAR2-like [Glycine max]
          Length = 1323

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 24/133 (18%)
 Frame = -2

Query: 337 GDEHVELQAHFSDSQSFGNS-SMTDENSSFKKDRSYFPH------SDSLSTV-------- 203
           G    +L+A FSDSQSFG+S +  +E SSF++DR+   +      SDSLST         
Sbjct: 423 GKGEPQLRAQFSDSQSFGDSLTSAEEISSFEQDRNGEHNEVQGQLSDSLSTGTSWASDDN 482

Query: 202 ------VENIHSEPILFGTSKYYE---PKIEDATTNQLPQIGEFQYTESGKFVMHDDAHD 50
                 +   HS+   F   +Y      +IED +++QLP   EFQ T   +FV+ DD H 
Sbjct: 483 SPFRRDISEEHSQLQQFSDFQYIRNSTSRIEDMSSDQLPPTFEFQRTYCREFVVDDDEHA 542

Query: 49  HEEEISDSGLASS 11
             E ISDS   SS
Sbjct: 543 QGEVISDSRPVSS 555


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