BLASTX nr result

ID: Glycyrrhiza24_contig00018067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018067
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235331.1| uncharacterized protein LOC100305689 [Glycin...   104   9e-21
ref|XP_003552477.1| PREDICTED: cyclin-U4-1-like [Glycine max]         102   4e-20
ref|XP_003529016.1| PREDICTED: cyclin-U4-1-like [Glycine max]         101   6e-20
ref|XP_003636176.1| Cyclin-U4-1 [Medicago truncatula] gi|2170719...   100   2e-19
gb|AFK41945.1| unknown [Lotus japonicus]                               99   4e-19

>ref|NP_001235331.1| uncharacterized protein LOC100305689 [Glycine max]
           gi|255626323|gb|ACU13506.1| unknown [Glycine max]
          Length = 209

 Score =  104 bits (259), Expect = 9e-21
 Identities = 47/54 (87%), Positives = 52/54 (96%)
 Frame = +1

Query: 1   GFHLNVTPGTFQAYCVHLQREMLQMQPLDFADSTLSLGKSLKAHLCFNEDESSH 162
           GFHLNVTPGTFQAYCVHLQREML +QPL+F+DSTL+LG+SLKAHLCFNEDE SH
Sbjct: 145 GFHLNVTPGTFQAYCVHLQREMLLIQPLNFSDSTLNLGQSLKAHLCFNEDECSH 198


>ref|XP_003552477.1| PREDICTED: cyclin-U4-1-like [Glycine max]
          Length = 205

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +1

Query: 1   GFHLNVTPGTFQAYCVHLQREMLQMQPLDFADSTLSLGKSLKAHLCFNEDESS 159
           GFHLNVTPGTFQAYC HLQ EML MQPL+FADS+LSLGKSLKAHLC+NEDESS
Sbjct: 143 GFHLNVTPGTFQAYCAHLQSEMLLMQPLNFADSSLSLGKSLKAHLCYNEDESS 195


>ref|XP_003529016.1| PREDICTED: cyclin-U4-1-like [Glycine max]
          Length = 202

 Score =  101 bits (252), Expect = 6e-20
 Identities = 49/55 (89%), Positives = 53/55 (96%), Gaps = 1/55 (1%)
 Frame = +1

Query: 1   GFHLNVTPGTFQAYCVHLQREMLQMQ-PLDFADSTLSLGKSLKAHLCFNEDESSH 162
           GFHLNVTPGTFQAYCV+LQREML +Q PL+FADSTL+LGKSLKAHLCFNEDESSH
Sbjct: 140 GFHLNVTPGTFQAYCVNLQREMLLIQQPLNFADSTLNLGKSLKAHLCFNEDESSH 194


>ref|XP_003636176.1| Cyclin-U4-1 [Medicago truncatula] gi|217071908|gb|ACJ84314.1|
           unknown [Medicago truncatula]
           gi|355502111|gb|AES83314.1| Cyclin-U4-1 [Medicago
           truncatula] gi|388522959|gb|AFK49541.1| unknown
           [Medicago truncatula]
          Length = 200

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/54 (88%), Positives = 49/54 (90%)
 Frame = +1

Query: 1   GFHLNVTPGTFQAYCVHLQREMLQMQPLDFADSTLSLGKSLKAHLCFNEDESSH 162
           GF+LNVTP TFQAYCVHLQREMLQMQPL F DSTLSL KSLKAHLC NEDESSH
Sbjct: 139 GFNLNVTPVTFQAYCVHLQREMLQMQPLVFEDSTLSLAKSLKAHLCLNEDESSH 192


>gb|AFK41945.1| unknown [Lotus japonicus]
          Length = 207

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/64 (73%), Positives = 52/64 (81%)
 Frame = +1

Query: 1   GFHLNVTPGTFQAYCVHLQREMLQMQPLDFADSTLSLGKSLKAHLCFNEDESSHXXXXXX 180
           GF+LNVTPGTFQ YC HLQREM+ +QPL F DS+LSLGKS+KAHLCFNEDESSH      
Sbjct: 144 GFNLNVTPGTFQGYCSHLQREMMLVQPLIFTDSSLSLGKSVKAHLCFNEDESSHQNQNQQ 203

Query: 181 XLAV 192
            LAV
Sbjct: 204 QLAV 207


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