BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018064
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...   277   2e-72
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...   259   4e-67
ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   231   1e-58
ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   229   4e-58
ref|XP_002528356.1| pentatricopeptide repeat-containing protein,...   223   5e-56

>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  277 bits (708), Expect = 2e-72
 Identities = 146/264 (55%), Positives = 178/264 (67%), Gaps = 2/264 (0%)
 Frame = +3

Query: 12  SPSCDPRATHARAIISSATDIALWNNLVTQYFKSNLPNDALSLFRRIP-RPNVVTWTALI 188
           S S DPR  HARAI S A D A+WNNL+T Y KSNL + A+SLF R+P  PNVV+WTALI
Sbjct: 14  SMSMDPRVRHARAITSHAKDRAVWNNLITHYSKSNLSSYAVSLFHRLPFPPNVVSWTALI 73

Query: 189 TAHSNTLLSLHHFLSMLRHPTLPNHRTIASLFSTCXXXXXXXXXXXXXXXXXXXXXXXXX 368
           +AHSNTLLSL HFL+MLRH TLPNHRT+ASLF+TC                         
Sbjct: 74  SAHSNTLLSLRHFLAMLRHNTLPNHRTLASLFATCAALTAVSFALSLHSLALKLALAHHP 133

Query: 369 XXXXXXXTFYSKCRLPHRALKVFDETPHRDHVCYSAMIVALAQNSRYSDALLLFADMRCQ 548
                  + Y+K R+PH A KVFDE P  D+VC+SA++VALAQNSR  DAL +F+DMRC+
Sbjct: 134 FPASSLLSVYAKLRMPHNARKVFDEIPQPDNVCFSALVVALAQNSRSVDALSVFSDMRCR 193

Query: 549 GFASTVHSVSGGXXXXXXXXXXEQCRMIHAHAVVAGLDSNSVVGCALVDLYAKCGLVESA 728
           GFASTVH VSGG          EQCRM+HAHA++AGLDSN VVG A+VD Y K G+V+ A
Sbjct: 194 GFASTVHGVSGGLRAAAQLAALEQCRMMHAHAIIAGLDSNVVVGSAVVDGYGKAGVVDDA 253

Query: 729 RKVFYVA-SCRDLVMWNVMISCYA 797
           R+VF  +    ++  WN M++ YA
Sbjct: 254 RRVFEDSLDDMNIAGWNAMMAGYA 277


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  259 bits (663), Expect = 4e-67
 Identities = 144/264 (54%), Positives = 174/264 (65%), Gaps = 2/264 (0%)
 Frame = +3

Query: 12  SPSCDPRATHARAIISSATDIALWNNLVTQYFKSNLPNDALSLFRRIP-RPNVVTWTALI 188
           S S DPRA HA+AI S   D A+WNNL+T Y KS+L + A+SLF+R+P  PNVV+WTALI
Sbjct: 14  SMSMDPRARHAQAITSHIKDRAVWNNLITHYSKSDLSSYAVSLFQRLPFPPNVVSWTALI 73

Query: 189 TAHSNTLLSLHHFLSMLRHPTLPNHRTIASLFSTCXXXXXXXXXXXXXXXXXXXXXXXXX 368
           +AHSNTLLSL HFL+MLRH TLPNHRT+ASLF+TC                         
Sbjct: 74  SAHSNTLLSLRHFLAMLRHNTLPNHRTVASLFTTCAALTAVSFALSLHSLALKLSLSQHP 133

Query: 369 XXXXXXXTFYSKCRLPHRALKVFDETPHRDHVCYSAMIVALAQNSRYSDALLLFADMRCQ 548
                  + Y+K R+P  A KVFDE P  D+VC+SA+IVALAQNSR  DA  +F++MR +
Sbjct: 134 FPASSLLSLYAKLRMPLNARKVFDEIPQPDNVCFSALIVALAQNSRSVDASSVFSEMRGR 193

Query: 549 GFASTVHSVSGGXXXXXXXXXXEQCRMIHAHAVVAGLDSNSVVGCALVDLYAKCGLVESA 728
           GFASTVHSVSG           EQCRM+HAHAVV GLDSN VVG ALVD Y K G+V  A
Sbjct: 194 GFASTVHSVSGVLRAAAQLAALEQCRMMHAHAVVLGLDSNVVVGSALVDGYGKAGVVNDA 253

Query: 729 RKVFY-VASCRDLVMWNVMISCYA 797
           R+VF       ++V WN M++ YA
Sbjct: 254 RRVFEDNLDDMNVVGWNAMMAGYA 277


>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score =  231 bits (589), Expect = 1e-58
 Identities = 125/264 (47%), Positives = 162/264 (61%), Gaps = 2/264 (0%)
 Frame = +3

Query: 12  SPSCDPRATHARAIISSATDIALWNNLVTQYFKSNLPNDALSLFRR-IPRPNVVTWTALI 188
           +P+C+PR  HA+AI S+ TD + +N+L+T Y KSNL + A+ +F   IP PNVV+WTALI
Sbjct: 27  TPNCNPRLIHAQAIKSAITDRSFYNSLITLYSKSNLLSKAVRIFHHHIPSPNVVSWTALI 86

Query: 189 TAHSNTLLSLHHFLSMLRHPTLPNHRTIASLFSTCXXXXXXXXXXXXXXXXXXXXXXXXX 368
           +A+++T  +L HF+SMLRHPTLPN RT+ASL  TC                         
Sbjct: 87  SAYASTSFALLHFISMLRHPTLPNQRTLASLLKTCASLPSLSFGLQLHSLSLKLSLSAQP 146

Query: 369 XXXXXXXTFYSKCRLPHRALKVFDETPHRDHVCYSAMIVALAQNSRYSDALLLFADMRCQ 548
                   FYSKCRLP  A +VFDE   RD VC++AMIV LAQN+R  DALL+F +M+  
Sbjct: 147 FVSSALVNFYSKCRLPLEACRVFDEITERDEVCFAAMIVGLAQNARPVDALLVFGEMKAC 206

Query: 549 GFASTVHSVSGGXXXXXXXXXXEQCRMIHAHAVVAGLDSNSVVGCALVDLYAKCGLVESA 728
              ST++SVSG           EQCR+IH HAV  G DSN +VG ALVD Y K GLV  A
Sbjct: 207 NVGSTMYSVSGALRAASELAALEQCRIIHGHAVSTGFDSNLIVGTALVDGYGKAGLVLDA 266

Query: 729 RKVF-YVASCRDLVMWNVMISCYA 797
           R++F  +    + V WN M++ YA
Sbjct: 267 RRIFDELLPSLNEVAWNAMMAGYA 290


>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  229 bits (585), Expect = 4e-58
 Identities = 121/259 (46%), Positives = 160/259 (61%), Gaps = 1/259 (0%)
 Frame = +3

Query: 24  DPRATHARAIISSATDIALWNNLVTQYFKSNLPNDALSLFRRIPRPNVVTWTALITAHSN 203
           DPR  HA+AI S AT+  ++NNL+T+Y K+NL + +  LF +IP P++V+WTALI+AHS+
Sbjct: 28  DPRIDHAQAIKSPATECVVYNNLITRYSKANLLHYSARLFNQIPFPDIVSWTALISAHSS 87

Query: 204 TLLSLHHFLSMLRHPTLPNHRTIASLFSTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 383
           T LSL HF+SMLR+PT PN RT+A LF TC                              
Sbjct: 88  TFLSLRHFVSMLRYPTFPNERTLAPLFKTCASLPCVSFGFALHSLAYKLSLCNGPYSGSA 147

Query: 384 XXTFYSKCRLPHRALKVFDETPHRDHVCYSAMIVALAQNSRYSDALLLFADMRCQGFAST 563
              FYSKCRL + A KVFDE  +RD  CYSA++V LAQN++   AL +F  M+    AST
Sbjct: 148 LVNFYSKCRLFNDACKVFDEISYRDEFCYSALVVGLAQNAQSIRALSMFRQMKASEVAST 207

Query: 564 VHSVSGGXXXXXXXXXXEQCRMIHAHAVVAGLDSNSVVGCALVDLYAKCGLVESARKVF- 740
           ++SVSG           E+CR+IH+HAVV GLD+N +V  AL+D Y K GL+  AR+VF 
Sbjct: 208 IYSVSGALRAAADLAALERCRVIHSHAVVTGLDTNVIVQTALIDGYGKSGLIIDARQVFD 267

Query: 741 YVASCRDLVMWNVMISCYA 797
               C ++V WN M+S YA
Sbjct: 268 ENLGCMNIVGWNAMLSSYA 286


>ref|XP_002528356.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532224|gb|EEF34028.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 356

 Score =  223 bits (567), Expect = 5e-56
 Identities = 122/266 (45%), Positives = 159/266 (59%), Gaps = 6/266 (2%)
 Frame = +3

Query: 18  SCDPRATHARAIISSATDIALWNNLVTQYFKSNLPND-----ALSLFRRIPRPNVVTWTA 182
           + DPR  HA+AI S  T+++ +N+L+T Y +S  PN      A  LF  +P PN+V+WT+
Sbjct: 8   NADPRILHAQAIKSPYTNLSCFNHLITLYSRS--PNFLVFSYANRLFSLLPSPNIVSWTS 65

Query: 183 LITAHSNTLLSLHHFLSMLRHPTLPNHRTIASLFSTCXXXXXXXXXXXXXXXXXXXXXXX 362
           LI+AH+++ LSLHHFLSMLR P LPN RT+ASLF  C                       
Sbjct: 66  LISAHTHSFLSLHHFLSMLRRPILPNQRTLASLFKACTNLSALSFGFSLHSMALKLSLDT 125

Query: 363 XXXXXXXXXTFYSKCRLPHRALKVFDETPHRDHVCYSAMIVALAQNSRYSDALLLFADMR 542
                     FYSKCRLP  A KVFDE P RD VCY A+IV LAQNSR  DAL +F +M+
Sbjct: 126 QPFSGSALVNFYSKCRLPENARKVFDEMPERDEVCYGALIVGLAQNSRAIDALSVFNEMK 185

Query: 543 CQGFASTVHSVSGGXXXXXXXXXXEQCRMIHAHAVVAGLDSNSVVGCALVDLYAKCGLVE 722
               +STV+SVSG           EQCR+IH HAVV+GLD N ++G +L+D Y K G++ 
Sbjct: 186 FCNVSSTVYSVSGALRAAAAMAALEQCRVIHGHAVVSGLDRNVIIGSSLIDGYGKAGVIM 245

Query: 723 SARKVF-YVASCRDLVMWNVMISCYA 797
            AR VF  +    ++V WN M++ YA
Sbjct: 246 DARMVFDELLPGLNMVAWNAMMAVYA 271