BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018058
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   256   1e-66
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   209   2e-52
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              199   1e-49
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24...   190   9e-47
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   190   9e-47

>ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Glycine
           max]
          Length = 554

 Score =  256 bits (654), Expect = 1e-66
 Identities = 129/146 (88%), Positives = 136/146 (93%)
 Frame = +1

Query: 1   NSISAPGQRDHVTAVNWIKYYFKGMWGSVIESHFREGLVKMEKQIADDSSTRKEELIKPM 180
           +SIS   QRD+VTAVNWIKYYFKG WGSVIESHFREGLV+ME   ADDSST+KEE +KPM
Sbjct: 150 SSISGSRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQME---ADDSSTQKEEQMKPM 206

Query: 181 RKIRPNEVMKHGARVHVPVSIAETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAII 360
           RKIRPNEVMK GARVHVPVSI ETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAII
Sbjct: 207 RKIRPNEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAII 266

Query: 361 VMNKPPKLPVKGNLPVHNSMDALAAA 438
           V+NKPPKLPVKG+LPVHNSMDALAAA
Sbjct: 267 VLNKPPKLPVKGSLPVHNSMDALAAA 292


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  209 bits (532), Expect = 2e-52
 Identities = 99/144 (68%), Positives = 121/144 (84%)
 Frame = +1

Query: 7   ISAPGQRDHVTAVNWIKYYFKGMWGSVIESHFREGLVKMEKQIADDSSTRKEELIKPMRK 186
           ++  G   HVTA++WIKYYF  + GSV++SHF +GLV ME+   DDSS  KE  IKP+RK
Sbjct: 72  VNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRK 131

Query: 187 IRPNEVMKHGARVHVPVSIAETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVM 366
           I+PNEVM+ G R++VPVS+AE RISKR+D IPSGTL+PNADEI+YLQRLV YKD AI+V+
Sbjct: 132 IKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPAILVL 191

Query: 367 NKPPKLPVKGNLPVHNSMDALAAA 438
           NKPPK+P+KGNLPVHNSMDALAAA
Sbjct: 192 NKPPKVPLKGNLPVHNSMDALAAA 215


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  199 bits (507), Expect = 1e-49
 Identities = 96/146 (65%), Positives = 121/146 (82%), Gaps = 2/146 (1%)
 Frame = +1

Query: 7   ISAPGQRDHVTAVNWIKYYFKGMWGSVIESHFREGLVKMEKQIADDSSTRKEELIKPMRK 186
           ++  G   HVTA++WIKYYF  + GSV++SHF +GLV ME+   DDSS  KE  IKP+RK
Sbjct: 72  VNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRK 131

Query: 187 IRPNEVMKHGARVHVPVSIAETRISKRYDAIPSGTLYPNADEIKYLQRLVI--YKDSAII 360
           I+PNEVM+ G R++VPVS+AE RISKR+D IPSGTL+PNADEI+YLQRL +  ++D AI+
Sbjct: 132 IKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQDPAIL 191

Query: 361 VMNKPPKLPVKGNLPVHNSMDALAAA 438
           V+NKPPK+P+KGNLPVHNSMDALAAA
Sbjct: 192 VLNKPPKVPLKGNLPVHNSMDALAAA 217


>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
           surA-hepA intergenic region yab0 from Escherichia coli
           genome gb|AE000116, and to hypothetical YABO family
           PF|00849 [Arabidopsis thaliana]
          Length = 491

 Score =  190 bits (483), Expect = 9e-47
 Identities = 92/136 (67%), Positives = 114/136 (83%)
 Frame = +1

Query: 31  HVTAVNWIKYYFKGMWGSVIESHFREGLVKMEKQIADDSSTRKEELIKPMRKIRPNEVMK 210
           HVTA++W+KYYF+ ++   I++HF +GLV+ME +   D+S  KE+   PMRKI+ NEVM+
Sbjct: 80  HVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRRDASREKEDGAIPMRKIKHNEVMQ 139

Query: 211 HGARVHVPVSIAETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVMNKPPKLPV 390
            G ++ +PVSIAE RISKRYD IPSGTLYPNADEI YLQRLV +KDSAIIV+NKPPKLPV
Sbjct: 140 IGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKPPKLPV 199

Query: 391 KGNLPVHNSMDALAAA 438
           KGN+P+HNSMDALAAA
Sbjct: 200 KGNVPIHNSMDALAAA 215


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
           gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
           pseudourine synthase 3, mitochondrial; AltName: Full=RNA
           pseudouridylate synthase 3; AltName: Full=RNA-uridine
           isomerase 3; Flags: Precursor gi|53850479|gb|AAU95416.1|
           At1g78910 [Arabidopsis thaliana]
           gi|56790228|gb|AAW30031.1| At1g78910 [Arabidopsis
           thaliana] gi|332198052|gb|AEE36173.1| RNA pseudourine
           synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  190 bits (483), Expect = 9e-47
 Identities = 92/136 (67%), Positives = 114/136 (83%)
 Frame = +1

Query: 31  HVTAVNWIKYYFKGMWGSVIESHFREGLVKMEKQIADDSSTRKEELIKPMRKIRPNEVMK 210
           HVTA++W+KYYF+ ++   I++HF +GLV+ME +   D+S  KE+   PMRKI+ NEVM+
Sbjct: 80  HVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRRDASREKEDGAIPMRKIKHNEVMQ 139

Query: 211 HGARVHVPVSIAETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVMNKPPKLPV 390
            G ++ +PVSIAE RISKRYD IPSGTLYPNADEI YLQRLV +KDSAIIV+NKPPKLPV
Sbjct: 140 IGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKPPKLPV 199

Query: 391 KGNLPVHNSMDALAAA 438
           KGN+P+HNSMDALAAA
Sbjct: 200 KGNVPIHNSMDALAAA 215