BLASTX nr result

ID: Glycyrrhiza24_contig00018024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018024
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610363.1| Pentatricopeptide repeat-containing protein ...    84   9e-15
ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12

>ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355511418|gb|AES92560.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 734

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/53 (77%), Positives = 44/53 (83%)
 Frame = +2

Query: 2   QIDEIRSELRLLTKLMKDEGYQPLSDSLPETIRDELTDQEGSHEIQLRVCGGL 160
           Q+DEIR EL LLTKLM DEGYQPL D LPET+ D LTDQEGS EIQ+ VCGGL
Sbjct: 682 QVDEIRLELELLTKLMIDEGYQPLLDRLPETVIDNLTDQEGSDEIQISVCGGL 734


>ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/53 (77%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
 Frame = +2

Query: 2   QIDEIRSELRLLTKLMKDEGYQPLSDSL-PETIRDELTDQEGSHEIQLRVCGG 157
           QIDEIR  L+LLTKLMKDEGYQPL DSL PETI D+L DQE SHEIQLR   G
Sbjct: 682 QIDEIRLGLKLLTKLMKDEGYQPLLDSLPPETISDDLKDQEDSHEIQLRFIYG 734


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