BLASTX nr result

ID: Glycyrrhiza24_contig00018008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00018008
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45467.1| unknown [Medicago truncatula]                          158   5e-37
gb|ACJ85357.1| unknown [Medicago truncatula]                          158   5e-37
ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3...   158   5e-37
ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]   134   8e-30
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795...   125   4e-27

>gb|AFK45467.1| unknown [Medicago truncatula]
          Length = 243

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/96 (83%), Positives = 88/96 (91%)
 Frame = -1

Query: 290 MAVTAISESQQIHRFPQYKYIDAVRWLPVLSAFNRFAVIASHDFDSDASSIEIHSFKPNP 111
           MAVTA SE   IHRFPQYKYIDAVRWLPVLSAFNRFAV+A+ DFDS+ SSIEIHSFKPNP
Sbjct: 1   MAVTANSE---IHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHSFKPNP 57

Query: 110 LSFEFQSSWASPSRVSSLKASQFLQKTIIAASTSSG 3
           LSFEFQSSW SPS +SS+K+SQFLQK+IIA+STSSG
Sbjct: 58  LSFEFQSSWTSPSPISSIKSSQFLQKSIIASSTSSG 93


>gb|ACJ85357.1| unknown [Medicago truncatula]
          Length = 205

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/96 (83%), Positives = 88/96 (91%)
 Frame = -1

Query: 290 MAVTAISESQQIHRFPQYKYIDAVRWLPVLSAFNRFAVIASHDFDSDASSIEIHSFKPNP 111
           MAVTA SE   IHRFPQYKYIDAVRWLPVLSAFNRFAV+A+ DFDS+ SSIEIHSFKPNP
Sbjct: 1   MAVTANSE---IHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHSFKPNP 57

Query: 110 LSFEFQSSWASPSRVSSLKASQFLQKTIIAASTSSG 3
           LSFEFQSSW SPS +SS+K+SQFLQK+IIA+STSSG
Sbjct: 58  LSFEFQSSWTSPSPISSIKSSQFLQKSIIASSTSSG 93


>ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1|
           Nucleoporin Nup43 [Medicago truncatula]
          Length = 351

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/96 (83%), Positives = 88/96 (91%)
 Frame = -1

Query: 290 MAVTAISESQQIHRFPQYKYIDAVRWLPVLSAFNRFAVIASHDFDSDASSIEIHSFKPNP 111
           MAVTA SE   IHRFPQYKYIDAVRWLPVLSAFNRFAV+A+ DFDS+ SSIEIHSFKPNP
Sbjct: 1   MAVTANSE---IHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHSFKPNP 57

Query: 110 LSFEFQSSWASPSRVSSLKASQFLQKTIIAASTSSG 3
           LSFEFQSSW SPS +SS+K+SQFLQK+IIA+STSSG
Sbjct: 58  LSFEFQSSWTSPSPISSIKSSQFLQKSIIASSTSSG 93


>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
          Length = 347

 Score =  134 bits (337), Expect = 8e-30
 Identities = 70/96 (72%), Positives = 77/96 (80%)
 Frame = -1

Query: 290 MAVTAISESQQIHRFPQYKYIDAVRWLPVLSAFNRFAVIASHDFDSDASSIEIHSFKPNP 111
           MA TAI       RFPQ+KY+DAVRWLP+ SAF+RFAV+A  DFDSDASSIEIHS  PNP
Sbjct: 1   MAATAIQ------RFPQHKYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHSLNPNP 54

Query: 110 LSFEFQSSWASPSRVSSLKASQFLQKTIIAASTSSG 3
           LS E  SSW+SPSRVSSLKAS FLQK +I ASTSSG
Sbjct: 55  LSLEPHSSWSSPSRVSSLKASHFLQKPLIVASTSSG 90


>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
          Length = 346

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/98 (66%), Positives = 75/98 (76%)
 Frame = -1

Query: 296 LAMAVTAISESQQIHRFPQYKYIDAVRWLPVLSAFNRFAVIASHDFDSDASSIEIHSFKP 117
           +A A TAI       RFPQ++Y+DAVRWLP+ SAF+RFAV+A  DFDSDASSIEIH+   
Sbjct: 1   MAAATTAIQ------RFPQHRYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHALNQ 54

Query: 116 NPLSFEFQSSWASPSRVSSLKASQFLQKTIIAASTSSG 3
           NP S E  SSW+SPSRVSSLK S FLQK +I ASTSSG
Sbjct: 55  NPFSLEPHSSWSSPSRVSSLKPSHFLQKPLIVASTSSG 92


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