BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017990
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592281.1| DNA-directed RNA polymerase III subunit RPC3...   240   1e-61
ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s...   239   2e-61
ref|XP_003535613.1| PREDICTED: DNA-directed RNA polymerase III s...   236   2e-60
ref|XP_003592280.1| DNA-directed RNA polymerase III subunit RPC3...   196   2e-48
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   190   1e-46

>ref|XP_003592281.1| DNA-directed RNA polymerase III subunit RPC3 [Medicago truncatula]
           gi|355481329|gb|AES62532.1| DNA-directed RNA polymerase
           III subunit RPC3 [Medicago truncatula]
          Length = 505

 Score =  240 bits (612), Expect = 1e-61
 Identities = 123/169 (72%), Positives = 137/169 (81%), Gaps = 5/169 (2%)
 Frame = +2

Query: 5   KRIIRWARNEEVESIVLKRYGKDAYRMFRHLSKENQFCPTDKVAEATLVEKKEAPKLLYR 184
           KRII  ARNEEVESIVLKRYG+DAYRMFRHL KENQF PTD++AEATLVEKKEAPKLL++
Sbjct: 337 KRIIHLARNEEVESIVLKRYGRDAYRMFRHLLKENQFRPTDQIAEATLVEKKEAPKLLFK 396

Query: 185 LWKDNYLHMEKLVVMGTKQ---SQILMWKVNEPLIWEYVLDEMYHAALNLSLRMAFEREK 355
           LW++NYL MEKL V  T Q   S ILMWKVN+PL+WE+VLDEMYH ALNL LRMAFE EK
Sbjct: 397 LWRENYLQMEKLTVSMTSQNGTSPILMWKVNQPLLWEHVLDEMYHGALNLKLRMAFEEEK 456

Query: 356 DEELLNVPKD--KFTGPLQKKYKRLVNVXXXXXXXXMKLDDALMLFHDF 496
           DEE+LN+ K     + PLQKKY+RL NV        MKLDDALMLFHDF
Sbjct: 457 DEEILNISKKTRNESAPLQKKYERLRNVLLLLKSSLMKLDDALMLFHDF 505


>ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           [Glycine max]
          Length = 518

 Score =  239 bits (611), Expect = 2e-61
 Identities = 124/168 (73%), Positives = 139/168 (82%), Gaps = 3/168 (1%)
 Frame = +2

Query: 2   LKRIIRWARNEEVESIVLKRYGKDAYRMFRHLSKENQFCPTDKVAEATLVEKKEAPKLLY 181
           LK+II  ARNEEVESIVLKRYG+DAYRMFR L+K+  F  TD++A +TLVEKKEA KLLY
Sbjct: 351 LKKIIEPARNEEVESIVLKRYGRDAYRMFRLLAKDCCFHDTDQIAASTLVEKKEASKLLY 410

Query: 182 RLWKDNYLHMEKL-VVMGTKQSQILMWKVNEPLIWEYVLDEMYHAALNLSLRMAFEREKD 358
           +LWKDNYL+MEK+    G KQ  ILMWKVN+PL+WEYVLDEMYHAALNLSLRMAFE+EKD
Sbjct: 411 KLWKDNYLYMEKVGATAGAKQITILMWKVNKPLLWEYVLDEMYHAALNLSLRMAFEQEKD 470

Query: 359 EELLNVPKDKF--TGPLQKKYKRLVNVXXXXXXXXMKLDDALMLFHDF 496
           EELL VPKDK    GPLQKKYKRL+NV        +KLDDALMLFHDF
Sbjct: 471 EELLKVPKDKLREPGPLQKKYKRLLNVRLLMGSSLLKLDDALMLFHDF 518


>ref|XP_003535613.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           [Glycine max]
          Length = 510

 Score =  236 bits (602), Expect = 2e-60
 Identities = 122/168 (72%), Positives = 139/168 (82%), Gaps = 3/168 (1%)
 Frame = +2

Query: 2   LKRIIRWARNEEVESIVLKRYGKDAYRMFRHLSKENQFCPTDKVAEATLVEKKEAPKLLY 181
           LK+II  ARNEEVESIVLKRYG D YR+FR L+K+  F  TD++A +TLVEKKEA KLLY
Sbjct: 343 LKKIIEPARNEEVESIVLKRYGTDGYRIFRLLAKDCCFHDTDQIAASTLVEKKEASKLLY 402

Query: 182 RLWKDNYLHMEKL-VVMGTKQSQILMWKVNEPLIWEYVLDEMYHAALNLSLRMAFEREKD 358
           +LWKDNYL+MEK+   +G KQ+ ILMWKVN+PL+WEYVLDEMYHAALNLSLRMAFE+EKD
Sbjct: 403 KLWKDNYLYMEKVGATVGAKQTTILMWKVNKPLLWEYVLDEMYHAALNLSLRMAFEQEKD 462

Query: 359 EELLNVPKDK--FTGPLQKKYKRLVNVXXXXXXXXMKLDDALMLFHDF 496
           EELL VPKDK    GPLQKKYK+L+NV        MKLDDALMLFHDF
Sbjct: 463 EELLKVPKDKRQGPGPLQKKYKKLLNVWLLLGSSLMKLDDALMLFHDF 510


>ref|XP_003592280.1| DNA-directed RNA polymerase III subunit RPC3 [Medicago truncatula]
           gi|355481328|gb|AES62531.1| DNA-directed RNA polymerase
           III subunit RPC3 [Medicago truncatula]
          Length = 468

 Score =  196 bits (499), Expect = 2e-48
 Identities = 97/124 (78%), Positives = 108/124 (87%), Gaps = 3/124 (2%)
 Frame = +2

Query: 5   KRIIRWARNEEVESIVLKRYGKDAYRMFRHLSKENQFCPTDKVAEATLVEKKEAPKLLYR 184
           KRII  ARNEEVESIVLKRYG+DAYRMFRHL KENQF PTD++AEATLVEKKEAPKLL++
Sbjct: 337 KRIIHLARNEEVESIVLKRYGRDAYRMFRHLLKENQFRPTDQIAEATLVEKKEAPKLLFK 396

Query: 185 LWKDNYLHMEKLVVMGTKQ---SQILMWKVNEPLIWEYVLDEMYHAALNLSLRMAFEREK 355
           LW++NYL MEKL V  T Q   S ILMWKVN+PL+WE+VLDEMYH ALNL LRMAFE EK
Sbjct: 397 LWRENYLQMEKLTVSMTSQNGTSPILMWKVNQPLLWEHVLDEMYHGALNLKLRMAFEEEK 456

Query: 356 DEEL 367
           DEE+
Sbjct: 457 DEEV 460


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
           vinifera]
          Length = 511

 Score =  190 bits (483), Expect = 1e-46
 Identities = 90/165 (54%), Positives = 125/165 (75%)
 Frame = +2

Query: 2   LKRIIRWARNEEVESIVLKRYGKDAYRMFRHLSKENQFCPTDKVAEATLVEKKEAPKLLY 181
           LK II  A+N+EVESI LKRYG+DAYR+FR LSK  +   TDK+++ T VEKK+  K+LY
Sbjct: 347 LKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDTAKILY 406

Query: 182 RLWKDNYLHMEKLVVMGTKQSQILMWKVNEPLIWEYVLDEMYHAALNLSLRMAFEREKDE 361
           +LWKD YL MEKL + G++QSQ L+WKV +  +W +VL+EMYH+ALNLSLR+A+E E+++
Sbjct: 407 QLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYELEQEQ 466

Query: 362 ELLNVPKDKFTGPLQKKYKRLVNVXXXXXXXXMKLDDALMLFHDF 496
           E++ +P++K  G L  +++RL  V        MKLDDA+MLF+DF
Sbjct: 467 EIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 511