BLASTX nr result

ID: Glycyrrhiza24_contig00017976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017976
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324010.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-b...    78   9e-13
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...    78   9e-13
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    77   2e-12
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...    67   2e-09

>ref|XP_002324010.1| predicted protein [Populus trichocarpa] gi|222867012|gb|EEF04143.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 53/125 (42%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
 Frame = -1

Query: 361 DLSQCTDKSPKSFPSPNDMPQEINGSGGAAHIQGNHHKCEGR--------DASTPVTYQQ 206
           D S+   +  +    PN++ Q I G       QGN     GR        D       ++
Sbjct: 117 DGSKLPSRENEKSSGPNNLSQII-GDMDEIQFQGNLQGYAGRGTSLLPPPDVGFGTALEE 175

Query: 205 GQCVPVEVPQIAVNELEPYHLELNAVKRDLSLVQDSITSIGSQLLKISVRREFLGIDSIG 26
              V   VP +A+NE E ++LEL+AVK DL  +Q+SI+ I SQLLK+SVRREFLG DS G
Sbjct: 176 NSRVSQHVPPVAINESEGFNLELSAVKNDLLHLQNSISRIQSQLLKLSVRREFLGSDSRG 235

Query: 25  RLYWA 11
           RLYWA
Sbjct: 236 RLYWA 240


>ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding
           domain-containing protein 9-like [Cucumis sativus]
          Length = 1277

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
 Frame = -1

Query: 367 SSDLSQCTDKSPK-SFPSPNDMPQEINGSGGAAHIQGNHHKCEGRDASTPVTYQQGQCVP 191
           SS  SQ + K  K + PS + +PQE++GS  +           G+   TP        VP
Sbjct: 588 SSSGSQNSGKPVKFNEPSLSGLPQEVDGSDQSNMETEISILPSGKQYFTPC---DANGVP 644

Query: 190 VEVPQIAVNELEPYHLELNAVKRDLSLVQDSITSIGSQLLKISVRREFLGIDSIGRLYWA 11
           V       NE + YH EL+++K+D+  VQDSI S   +LLKISVRREFLG D+ GRLYWA
Sbjct: 645 VAPQVPPPNESQAYHSELDSIKKDILQVQDSIASTELELLKISVRREFLGSDAAGRLYWA 704


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
            [Cucumis sativus]
          Length = 2131

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
 Frame = -1

Query: 367  SSDLSQCTDKSPK-SFPSPNDMPQEINGSGGAAHIQGNHHKCEGRDASTPVTYQQGQCVP 191
            SS  SQ + K  K + PS + +PQE++GS  +           G+   TP        VP
Sbjct: 1442 SSSGSQNSGKPVKFNEPSLSGLPQEVDGSDQSNMETEISILPSGKQYFTPC---DANGVP 1498

Query: 190  VEVPQIAVNELEPYHLELNAVKRDLSLVQDSITSIGSQLLKISVRREFLGIDSIGRLYWA 11
            V       NE + YH EL+++K+D+  VQDSI S   +LLKISVRREFLG D+ GRLYWA
Sbjct: 1499 VAPQVPPPNESQAYHSELDSIKKDILQVQDSIASTELELLKISVRREFLGSDAAGRLYWA 1558


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/111 (43%), Positives = 66/111 (59%)
 Frame = -1

Query: 334  PKSFPSPNDMPQEINGSGGAAHIQGNHHKCEGRDASTPVTYQQGQCVPVEVPQIAVNELE 155
            P      N + QE++G G   ++Q N   CE  + +      QG   P ++  + V E  
Sbjct: 1498 PNELHLQNPLQQEMDGLGTEFNLQVN--MCENMEKND----LQGLHHPSDIRIVHVAE-- 1549

Query: 154  PYHLELNAVKRDLSLVQDSITSIGSQLLKISVRREFLGIDSIGRLYWALAR 2
             +  ELN++K D+S +QDS+ SI SQLLK+SVRREFLG DS GRLYW LA+
Sbjct: 1550 -HDSELNSIKNDISDLQDSMASIESQLLKLSVRREFLGSDSAGRLYWILAK 1599


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
 Frame = -1

Query: 343  DKSPKSF---PSPNDMPQEINGSGGAAHIQGNHHKCEG-----RDASTPV---------T 215
            DK P        P+   Q I+ +     ++  H   EG     ++ S P+         +
Sbjct: 1441 DKHPSEINYEKKPSHDSQNIDSTNNHGPVKDMHDAMEGSNDPSKENSKPLGPNHPGFSLS 1500

Query: 214  YQQGQCVPVEVPQIAVNELEPYHLELNAVKRDLSLVQDSITSIGSQLLKISVRREFLGID 35
                  V + +P + +NE + YH +++A+K D+  +Q+ I+S+ SQL K S+RREFLG D
Sbjct: 1501 SDMNALVVLNLPSVTMNESQAYHTDVSAIKDDILRLQNLISSMESQLSKQSLRREFLGSD 1560

Query: 34   SIGRLYWALA 5
            S G LYWA A
Sbjct: 1561 SRGHLYWASA 1570


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