BLASTX nr result

ID: Glycyrrhiza24_contig00017944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017944
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623975.1| Origin recognition complex 5 subunit [Medica...   239   2e-61
ref|XP_003551665.1| PREDICTED: origin recognition complex subuni...   215   3e-54
ref|XP_003533607.1| PREDICTED: origin recognition complex subuni...   213   1e-53
ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|2...   191   7e-47
ref|XP_002283101.1| PREDICTED: origin recognition complex subuni...   183   1e-44

>ref|XP_003623975.1| Origin recognition complex 5 subunit [Medicago truncatula]
           gi|355498990|gb|AES80193.1| Origin recognition complex 5
           subunit [Medicago truncatula]
          Length = 542

 Score =  239 bits (609), Expect = 2e-61
 Identities = 116/125 (92%), Positives = 121/125 (96%)
 Frame = -1

Query: 376 LKMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEDDIRQILLRNQANQKLYSSFLD 197
           LKM EVGLIFISSTSPDTFY+NMGYVEPIPIYFPDYTE DIRQILLRNQANQKLYSSFLD
Sbjct: 220 LKMLEVGLIFISSTSPDTFYTNMGYVEPIPIYFPDYTEGDIRQILLRNQANQKLYSSFLD 279

Query: 196 VALKPFCRITRQIGELSTALKPLYEKYCEPLSDKGKRVVPSEDMKRRLFNHIKSHISSSL 17
           VALKPFCRITRQ+GELSTALKPL+EKYCEPLSDKGK VVPSEDMKRRLFNHIK HI+SSL
Sbjct: 280 VALKPFCRITRQVGELSTALKPLFEKYCEPLSDKGKGVVPSEDMKRRLFNHIKPHIASSL 339

Query: 16  NDIFK 2
           ND+FK
Sbjct: 340 NDVFK 344


>ref|XP_003551665.1| PREDICTED: origin recognition complex subunit 5-like [Glycine max]
          Length = 541

 Score =  215 bits (547), Expect = 3e-54
 Identities = 104/125 (83%), Positives = 112/125 (89%)
 Frame = -1

Query: 376 LKMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEDDIRQILLRNQANQKLYSSFLD 197
           L MPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTE+DIRQILLRNQ NQKLYSSFLD
Sbjct: 219 LNMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEEDIRQILLRNQVNQKLYSSFLD 278

Query: 196 VALKPFCRITRQIGELSTALKPLYEKYCEPLSDKGKRVVPSEDMKRRLFNHIKSHISSSL 17
           V+LK FC IT+QI  LS ALKPLYEKYCEPLSDKGK V P+++MKRRL  HI  HI+SSL
Sbjct: 279 VSLKSFCGITKQIDHLSAALKPLYEKYCEPLSDKGKGVAPNQEMKRRLLAHINPHIASSL 338

Query: 16  NDIFK 2
           N+IFK
Sbjct: 339 NEIFK 343


>ref|XP_003533607.1| PREDICTED: origin recognition complex subunit 5-like [Glycine max]
          Length = 542

 Score =  213 bits (543), Expect = 1e-53
 Identities = 103/125 (82%), Positives = 112/125 (89%)
 Frame = -1

Query: 376 LKMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEDDIRQILLRNQANQKLYSSFLD 197
           L  PEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTE+DIRQILLRNQ NQKLYSSFLD
Sbjct: 220 LNTPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEEDIRQILLRNQVNQKLYSSFLD 279

Query: 196 VALKPFCRITRQIGELSTALKPLYEKYCEPLSDKGKRVVPSEDMKRRLFNHIKSHISSSL 17
           V+LK FC IT+QI +LS ALKPLYEKYCEPLSDKGK V P+++MKRRL  HI  HI+SSL
Sbjct: 280 VSLKSFCGITKQIDDLSAALKPLYEKYCEPLSDKGKGVAPNQEMKRRLLAHINPHIASSL 339

Query: 16  NDIFK 2
           N+IFK
Sbjct: 340 NEIFK 344


>ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|222861576|gb|EEE99118.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score =  191 bits (484), Expect = 7e-47
 Identities = 89/124 (71%), Positives = 107/124 (86%)
 Frame = -1

Query: 376 LKMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEDDIRQILLRNQANQKLYSSFLD 197
           LKM EVGLIFIS+TSPDT+YSNMGY E +P+YFP+YTEDD+RQIL+RNQAN+KLYSSFLD
Sbjct: 218 LKMHEVGLIFISNTSPDTYYSNMGYTEHVPVYFPEYTEDDLRQILMRNQANRKLYSSFLD 277

Query: 196 VALKPFCRITRQIGELSTALKPLYEKYCEPLSDKGKRVVPSEDMKRRLFNHIKSHISSSL 17
           V L+PFCR TR++ ELSTA  PL+ KYCEPLSD     VP+E+MKRRLF+H + HI+ SL
Sbjct: 278 VVLRPFCRTTRRVDELSTAFSPLFRKYCEPLSDLAS--VPNEEMKRRLFSHFQPHIAPSL 335

Query: 16  NDIF 5
           N+IF
Sbjct: 336 NEIF 339


>ref|XP_002283101.1| PREDICTED: origin recognition complex subunit 5-like [Vitis
           vinifera]
          Length = 541

 Score =  183 bits (464), Expect = 1e-44
 Identities = 86/125 (68%), Positives = 105/125 (84%)
 Frame = -1

Query: 376 LKMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEDDIRQILLRNQANQKLYSSFLD 197
           L MPEVGLIFIS  SPD +YS+ GYVEPIPI FPDYTED +RQI +RNQAN KLYSSFLD
Sbjct: 220 LNMPEVGLIFISKVSPDAYYSDRGYVEPIPILFPDYTEDSLRQIFMRNQANPKLYSSFLD 279

Query: 196 VALKPFCRITRQIGELSTALKPLYEKYCEPLSDKGKRVVPSEDMKRRLFNHIKSHISSSL 17
           V L+ F RITR++ ELSTA  PL++KYCEPLSD G  +VP+EDMKR+LF+H++ H++ +L
Sbjct: 280 VVLRTFSRITRRVDELSTAFSPLFKKYCEPLSDPG--LVPNEDMKRKLFSHLQPHLAPAL 337

Query: 16  NDIFK 2
           N+IFK
Sbjct: 338 NEIFK 342


Top