BLASTX nr result

ID: Glycyrrhiza24_contig00017938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017938
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590724.1| GTPase obg [Medicago truncatula] gi|35547977...   117   1e-24
ref|XP_003516489.1| PREDICTED: GTPase obg-like [Glycine max]           94   9e-18
ref|XP_004142409.1| PREDICTED: GTPase obg-like [Cucumis sativus]       74   1e-11
gb|ADN34199.1| mitochondrial GTPase [Cucumis melo subsp. melo]         73   3e-11
ref|XP_004157549.1| PREDICTED: GTPase obg-like [Cucumis sativus]       70   2e-10

>ref|XP_003590724.1| GTPase obg [Medicago truncatula] gi|355479772|gb|AES60975.1| GTPase
           obg [Medicago truncatula]
          Length = 512

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/68 (76%), Positives = 61/68 (89%)
 Frame = +3

Query: 72  MLVFQARSIRHIEAFTQTCISRWSTILYSRYSDAPHKKSKLAPLQERRMIDKFKIFAKAG 251
           MLVF+AR +R ++ FT+TC+SRWST+ YS YS++PH KSKLAPLQERRMIDK KIFAKAG
Sbjct: 1   MLVFEARYVRQVKVFTRTCVSRWSTVFYSCYSNSPHSKSKLAPLQERRMIDKVKIFAKAG 60

Query: 252 DGGHGCTS 275
           DGGHGCTS
Sbjct: 61  DGGHGCTS 68


>ref|XP_003516489.1| PREDICTED: GTPase obg-like [Glycine max]
          Length = 492

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/57 (77%), Positives = 50/57 (87%)
 Frame = +3

Query: 105 IEAFTQTCISRWSTILYSRYSDAPHKKSKLAPLQERRMIDKFKIFAKAGDGGHGCTS 275
           +EAFTQ  ISRWS  LY+RYSD P KKSKLAPLQERRM+D+ KIFAKAGDGG+GC+S
Sbjct: 1   MEAFTQRFISRWSVTLYARYSDTPQKKSKLAPLQERRMMDQCKIFAKAGDGGNGCSS 57


>ref|XP_004142409.1| PREDICTED: GTPase obg-like [Cucumis sativus]
          Length = 511

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/62 (53%), Positives = 42/62 (67%)
 Frame = +3

Query: 90  RSIRHIEAFTQTCISRWSTILYSRYSDAPHKKSKLAPLQERRMIDKFKIFAKAGDGGHGC 269
           + + H+    ++    W     S YSD P KKSKLAPLQERRMID+FK++AK GDGG+GC
Sbjct: 7   KRVLHLRGLRESSSCPWLFSAISYYSDTPKKKSKLAPLQERRMIDRFKVYAKGGDGGNGC 66

Query: 270 TS 275
            S
Sbjct: 67  QS 68


>gb|ADN34199.1| mitochondrial GTPase [Cucumis melo subsp. melo]
          Length = 521

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/62 (53%), Positives = 42/62 (67%)
 Frame = +3

Query: 90  RSIRHIEAFTQTCISRWSTILYSRYSDAPHKKSKLAPLQERRMIDKFKIFAKAGDGGHGC 269
           + +  +    ++    W     S YSDAP KKSKLAPLQERRMID+FK++AK GDGG+GC
Sbjct: 7   KKVLRLRGLRESSSCPWLFSAISYYSDAPKKKSKLAPLQERRMIDRFKVYAKGGDGGNGC 66

Query: 270 TS 275
            S
Sbjct: 67  QS 68


>ref|XP_004157549.1| PREDICTED: GTPase obg-like [Cucumis sativus]
          Length = 487

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +3

Query: 156 SRYSDAPHKKSKLAPLQERRMIDKFKIFAKAGDGGHGCTS 275
           S YSD P KKSKLAPLQERRMID+FK++AK GDGG+GC S
Sbjct: 7   SYYSDTPKKKSKLAPLQERRMIDRFKVYAKGGDGGNGCQS 46


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