BLASTX nr result

ID: Glycyrrhiza24_contig00017907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017907
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   402   e-110
ref|XP_003590708.1| ATP-dependent DNA helicase pcrA [Medicago tr...   350   3e-94
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   293   3e-77
emb|CBI38559.3| unnamed protein product [Vitis vinifera]              293   3e-77
ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...   284   1e-74

>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  402 bits (1033), Expect = e-110
 Identities = 199/260 (76%), Positives = 224/260 (86%)
 Frame = +1

Query: 1    RATADIDGGTLLNEDYDIRSVRQYLLDDVSEFLSTKFIELKGEMEMSEDKGCTFVLKAFI 180
            RA  D+DGGTLLNEDYDIRSV QYLLDDVSEFLSTK +E+K E E+SEDKGC FVLKAFI
Sbjct: 740  RAVVDVDGGTLLNEDYDIRSVLQYLLDDVSEFLSTKLVEVKEEREISEDKGCIFVLKAFI 799

Query: 181  DYLXXXXXXXXXXXXKDNENSVTLTTIHQAKGLEWDIVFIVKVNESEIPLLHDFKGAVKD 360
            DYL            KDNENSVTLTTIHQAKGLEWD+VFIVK N+SEIPLLHDFKG VKD
Sbjct: 800  DYLLEREKENFGARRKDNENSVTLTTIHQAKGLEWDVVFIVKANDSEIPLLHDFKGTVKD 859

Query: 361  NGALVEEERRLLYVAMTRARQKLFILYVVMDSNWQMLQPSRFLKEIPHHLLEFQGEINLQ 540
              AL+EEERRLLYVAMTRAR+KLFIL+V+MDSNWQMLQPSRFLKEIP HL E QGEI+ Q
Sbjct: 860  TAALLEEERRLLYVAMTRAREKLFILHVMMDSNWQMLQPSRFLKEIPRHLTEVQGEISFQ 919

Query: 541  ELQVKQEAHQKEAAYCTTDLLIKEQQSEAALVPVPKELLNNHFSEASNELAEFAEANNGS 720
            EL +KQEA QKE A+CTTDLLIKE+QSEA ++P+P E+L+NH SE SNELA+FAEANN +
Sbjct: 920  ELLIKQEALQKETAHCTTDLLIKEKQSEADVIPMPHEILDNHSSETSNELAQFAEANNRN 979

Query: 721  NFLKRFSVEERSVVSHIFHQ 780
            +FL+RFSVE RS+VSH+FHQ
Sbjct: 980  DFLRRFSVENRSIVSHLFHQ 999


>ref|XP_003590708.1| ATP-dependent DNA helicase pcrA [Medicago truncatula]
           gi|355479756|gb|AES60959.1| ATP-dependent DNA helicase
           pcrA [Medicago truncatula]
          Length = 339

 Score =  350 bits (897), Expect = 3e-94
 Identities = 172/215 (80%), Positives = 188/215 (87%)
 Frame = +1

Query: 136 MSEDKGCTFVLKAFIDYLXXXXXXXXXXXXKDNENSVTLTTIHQAKGLEWDIVFIVKVNE 315
           MSEDKGC F LKAFIDYL            KDNENSVTLTTIHQAKGLEWDIVFIVK NE
Sbjct: 1   MSEDKGCIFTLKAFIDYLFEREKENFRARRKDNENSVTLTTIHQAKGLEWDIVFIVKANE 60

Query: 316 SEIPLLHDFKGAVKDNGALVEEERRLLYVAMTRARQKLFILYVVMDSNWQMLQPSRFLKE 495
           SEIPLLHDFKG VKD  A+VEEERRLLYVAMTRARQKLF+LYV++DSNWQMLQPSRFLKE
Sbjct: 61  SEIPLLHDFKGVVKDTAAIVEEERRLLYVAMTRARQKLFMLYVMVDSNWQMLQPSRFLKE 120

Query: 496 IPHHLLEFQGEINLQELQVKQEAHQKEAAYCTTDLLIKEQQSEAALVPVPKELLNNHFSE 675
           IPHHLLEFQG+IN+QELQ+K+E HQKE   CTTDLLIK+QQSEA L PVP  LLNNHFSE
Sbjct: 121 IPHHLLEFQGDINMQELQIKREGHQKETTCCTTDLLIKKQQSEADLDPVPNNLLNNHFSE 180

Query: 676 ASNELAEFAEANNGSNFLKRFSVEERSVVSHIFHQ 780
           AS+ELAEFAEANNG++F++RF VE+RSVVSHIFH+
Sbjct: 181 ASSELAEFAEANNGNDFIRRFDVEDRSVVSHIFHK 215


>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  293 bits (750), Expect = 3e-77
 Identities = 157/260 (60%), Positives = 188/260 (72%), Gaps = 1/260 (0%)
 Frame = +1

Query: 1    RATADIDGGTLLNEDYDIRSVRQYLLDDVSEFLSTKFIELKGEMEMS-EDKGCTFVLKAF 177
            RA  D+DGG LLNED DIRSV QYLLDDVS+FLSTKF   K E ++  ++ GC  VLKAF
Sbjct: 731  RAVVDVDGGKLLNEDNDIRSVLQYLLDDVSDFLSTKFTASKEESDIIVKEGGCGHVLKAF 790

Query: 178  IDYLXXXXXXXXXXXXKDNENSVTLTTIHQAKGLEWDIVFIVKVNESEIPLLHDFKGAVK 357
            ID++             DNE SVTLTTIHQ+KGLEWD VFIVK NESEIPLLH+F G VK
Sbjct: 791  IDFISERERENFRSRRHDNEESVTLTTIHQSKGLEWDTVFIVKANESEIPLLHEFNGVVK 850

Query: 358  DNGALVEEERRLLYVAMTRARQKLFILYVVMDSNWQMLQPSRFLKEIPHHLLEFQGEINL 537
            +NG  +EEERRLLYV MTRAR+KLFILYV+MDS+WQMLQPSRFLKEIPHHLLE QGE+++
Sbjct: 851  ENGTSIEEERRLLYVGMTRARKKLFILYVLMDSSWQMLQPSRFLKEIPHHLLEVQGELSV 910

Query: 538  QELQVKQEAHQKEAAYCTTDLLIKEQQSEAALVPVPKELLNNHFSEASNELAEFAEANNG 717
            Q L  KQE+   E A  T      ++ S   +  +P E LN    E S E  E   + +G
Sbjct: 911  QGLHAKQESTPIENAQFTIGEGGDKKSSREYI--LPNEGLNIQIDECSKETTEPMGSCDG 968

Query: 718  SNFLKRFSVEERSVVSHIFH 777
            ++FL+RF+VE+RSVVSH+FH
Sbjct: 969  NSFLRRFNVEDRSVVSHLFH 988


>emb|CBI38559.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  293 bits (750), Expect = 3e-77
 Identities = 157/260 (60%), Positives = 188/260 (72%), Gaps = 1/260 (0%)
 Frame = +1

Query: 1    RATADIDGGTLLNEDYDIRSVRQYLLDDVSEFLSTKFIELKGEMEMS-EDKGCTFVLKAF 177
            RA  D+DGG LLNED DIRSV QYLLDDVS+FLSTKF   K E ++  ++ GC  VLKAF
Sbjct: 529  RAVVDVDGGKLLNEDNDIRSVLQYLLDDVSDFLSTKFTASKEESDIIVKEGGCGHVLKAF 588

Query: 178  IDYLXXXXXXXXXXXXKDNENSVTLTTIHQAKGLEWDIVFIVKVNESEIPLLHDFKGAVK 357
            ID++             DNE SVTLTTIHQ+KGLEWD VFIVK NESEIPLLH+F G VK
Sbjct: 589  IDFISERERENFRSRRHDNEESVTLTTIHQSKGLEWDTVFIVKANESEIPLLHEFNGVVK 648

Query: 358  DNGALVEEERRLLYVAMTRARQKLFILYVVMDSNWQMLQPSRFLKEIPHHLLEFQGEINL 537
            +NG  +EEERRLLYV MTRAR+KLFILYV+MDS+WQMLQPSRFLKEIPHHLLE QGE+++
Sbjct: 649  ENGTSIEEERRLLYVGMTRARKKLFILYVLMDSSWQMLQPSRFLKEIPHHLLEVQGELSV 708

Query: 538  QELQVKQEAHQKEAAYCTTDLLIKEQQSEAALVPVPKELLNNHFSEASNELAEFAEANNG 717
            Q L  KQE+   E A  T      ++ S   +  +P E LN    E S E  E   + +G
Sbjct: 709  QGLHAKQESTPIENAQFTIGEGGDKKSSREYI--LPNEGLNIQIDECSKETTEPMGSCDG 766

Query: 718  SNFLKRFSVEERSVVSHIFH 777
            ++FL+RF+VE+RSVVSH+FH
Sbjct: 767  NSFLRRFNVEDRSVVSHLFH 786


>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
            predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  284 bits (727), Expect = 1e-74
 Identities = 149/260 (57%), Positives = 178/260 (68%)
 Frame = +1

Query: 1    RATADIDGGTLLNEDYDIRSVRQYLLDDVSEFLSTKFIELKGEMEMSEDKGCTFVLKAFI 180
            RA  D DGG  LNED D+RSV QYLLDDVS+ LS +    +GE ++ E KGC  +LK FI
Sbjct: 675  RAVVDSDGGKWLNEDNDLRSVLQYLLDDVSDVLSMQVASKEGESDVQEQKGCVSLLKEFI 734

Query: 181  DYLXXXXXXXXXXXXKDNENSVTLTTIHQAKGLEWDIVFIVKVNESEIPLLHDFKGAVKD 360
            DY+             +NENSVTLTTIHQ+KGLEWD VFIVK NESEIPLLH+F G+ K+
Sbjct: 735  DYITEREKENFRSRRHNNENSVTLTTIHQSKGLEWDTVFIVKANESEIPLLHEFNGSAKE 794

Query: 361  NGALVEEERRLLYVAMTRARQKLFILYVVMDSNWQMLQPSRFLKEIPHHLLEFQGEINLQ 540
            NG  +EEERRL YVAMTRAR+KLFI YV MDSNWQML PSRFLKEIP HL E Q E+ LQ
Sbjct: 795  NGNSIEEERRLFYVAMTRARKKLFITYVAMDSNWQMLHPSRFLKEIPDHLREIQAEVCLQ 854

Query: 541  ELQVKQEAHQKEAAYCTTDLLIKEQQSEAALVPVPKELLNNHFSEASNELAEFAEANNGS 720
            +LQ K      E      DL   ++Q  + L     + L N  +EAS E  E  ++ NG+
Sbjct: 855  DLQTKHREIGNETIDFVIDL--PKEQKVSDLETESNDFLVNQINEASKESLETIDSYNGN 912

Query: 721  NFLKRFSVEERSVVSHIFHQ 780
             FL+RF+VEERSV+SH+FHQ
Sbjct: 913  IFLRRFAVEERSVISHLFHQ 932


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