BLASTX nr result

ID: Glycyrrhiza24_contig00017878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017878
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624514.1| Nuclear factor related to kappa-B-binding pr...   295   7e-78
ref|XP_003519934.1| PREDICTED: uncharacterized protein LOC100776...   194   3e-47
ref|XP_002320420.1| predicted protein [Populus trichocarpa] gi|2...   171   2e-40
ref|XP_002512826.1| hypothetical protein RCOM_1445020 [Ricinus c...   155   2e-35
emb|CAN68271.1| hypothetical protein VITISV_029912 [Vitis vinifera]   140   3e-31

>ref|XP_003624514.1| Nuclear factor related to kappa-B-binding protein [Medicago
            truncatula] gi|355499529|gb|AES80732.1| Nuclear factor
            related to kappa-B-binding protein [Medicago truncatula]
          Length = 993

 Score =  295 bits (756), Expect = 7e-78
 Identities = 140/173 (80%), Positives = 155/173 (89%)
 Frame = -1

Query: 889  GSCLIPRQDPLSAGNIRDWAVTAPRMVAPSQSHVNTGDFIGLHWFSSDHHVRGAWNGSDN 710
            GS LIPRQDPL+A NI DWAV+APRMVAPS SH+NT +FIG  WFSSD  ++GAWNGS N
Sbjct: 822  GSYLIPRQDPLAARNITDWAVSAPRMVAPSHSHINTNNFIGQPWFSSDQQIQGAWNGSGN 881

Query: 709  GSLSSQSLATGGNSDHSLFNALSQCSQLRSGSPYESVRHTDQFLAPRNYGVVDAGSPRIN 530
            G+LSSQSL TGGNS+H+LF+ LSQC+QLRSGSPYES+RHTDQFL+PR YGVVDAG+ RIN
Sbjct: 882  GNLSSQSLGTGGNSNHNLFSVLSQCNQLRSGSPYESIRHTDQFLSPRTYGVVDAGTHRIN 941

Query: 529  AVVPPSSHPLDYFSGRDAPGALVPDDMTWMSLHPQNPALNDQMGKSYLRSWNR 371
            AVVPPSSHPLDYFS RDAPGALVPDDMTWMSL PQNP LNDQ+G SYLRSWNR
Sbjct: 942  AVVPPSSHPLDYFSERDAPGALVPDDMTWMSLPPQNPTLNDQIG-SYLRSWNR 993


>ref|XP_003519934.1| PREDICTED: uncharacterized protein LOC100776137 [Glycine max]
          Length = 944

 Score =  194 bits (492), Expect = 3e-47
 Identities = 98/175 (56%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
 Frame = -1

Query: 889  GSCLIPRQDPLSAGNIRDWAVTAPRMVAPSQSHVNTGDFIGLHWFSSDHHVR-GAWNGSD 713
            G  LIPRQDPL+A N+ DWA    R+  PSQSH+NTGDFI  HWF +DH VR G WNGSD
Sbjct: 786  GRYLIPRQDPLTAVNMTDWAANNARIAGPSQSHLNTGDFIDHHWFPADHQVRGGGWNGSD 845

Query: 712  NGSLSSQSLATGGNSDHSLFNALSQCSQLRSGSPYESVRHTDQFLAPRNYGVVDAGSPRI 533
             G LSSQSL TG ++D SLF+ LS+C QL S                        G+PR+
Sbjct: 846  GGGLSSQSLGTGASADQSLFSILSECDQLHS------------------------GTPRV 881

Query: 532  NAVVPPSSHPLDYFSGRDAPGALVPDDMTWMSLHP-QNPALNDQMGKSYLRSWNR 371
            N V PP+SHPLDYF+ R+AP  LVPDD  WMSL P QN +L+DQ+ K YLRSWNR
Sbjct: 882  NTVAPPASHPLDYFTRREAPSGLVPDDTVWMSLPPHQNSSLHDQIRKPYLRSWNR 936


>ref|XP_002320420.1| predicted protein [Populus trichocarpa] gi|222861193|gb|EEE98735.1|
            predicted protein [Populus trichocarpa]
          Length = 912

 Score =  171 bits (434), Expect = 2e-40
 Identities = 92/190 (48%), Positives = 118/190 (62%), Gaps = 17/190 (8%)
 Frame = -1

Query: 889  GSCLIPRQDPLSAGNIRDWAVTAPRMVAPSQSHVNTGDFIGLHWFSSDHHVRGAWNGSDN 710
            G  LIPRQ      N+++W V   RM A  QSH N    +  +WFS +H VRG WNG+  
Sbjct: 726  GGFLIPRQGHAPLVNLQEWNVNPVRMPARLQSHPNEDGLLIQNWFSGEHQVRGDWNGAGG 785

Query: 709  GSLSSQSLATGGNSDHSLFNALSQCSQL---------RSGSP--------YESVRHTDQF 581
             S+S+QS+  G N+D SLF+ LSQC+QL         RSGSP         +SV   +QF
Sbjct: 786  VSVSNQSI--GSNADQSLFSVLSQCNQLHMASPINQLRSGSPTNQRPNGTIDSVGSAEQF 843

Query: 580  LAPRNYGVVDAGSPRINAVVPPSSHPLDYFSGRDAPGALVPDDMTWMSLHPQNPALNDQM 401
            + PR YG+V   +PR++  +P  +HPLDYFSGRD   +L+PDDM WM+L PQN  L+D M
Sbjct: 844  VLPRAYGMVSGVTPRVSNALPQPAHPLDYFSGRDTASSLMPDDMGWMAL-PQNSVLHDPM 902

Query: 400  GKSYLRSWNR 371
            GK YLRSWNR
Sbjct: 903  GKPYLRSWNR 912


>ref|XP_002512826.1| hypothetical protein RCOM_1445020 [Ricinus communis]
            gi|223547837|gb|EEF49329.1| hypothetical protein
            RCOM_1445020 [Ricinus communis]
          Length = 858

 Score =  155 bits (391), Expect = 2e-35
 Identities = 77/173 (44%), Positives = 109/173 (63%)
 Frame = -1

Query: 889  GSCLIPRQDPLSAGNIRDWAVTAPRMVAPSQSHVNTGDFIGLHWFSSDHHVRGAWNGSDN 710
            G+  IPRQ      N++DW V   RM A  Q  +N    +  +W+S +H VRG WN +D 
Sbjct: 689  GAYSIPRQGHEPPVNLQDWPVNPVRMSAGLQPQLNNDALLNQNWYSGEHQVRGGWNSTDG 748

Query: 709  GSLSSQSLATGGNSDHSLFNALSQCSQLRSGSPYESVRHTDQFLAPRNYGVVDAGSPRIN 530
             S+  Q +  G N+D SL++ LSQ +QLR  +   S+  T+QF+ PRNYG+    S RIN
Sbjct: 749  ASVPGQRM--GSNTDQSLYSVLSQYNQLRMSNHSNSMGPTEQFMLPRNYGMESGVSSRIN 806

Query: 529  AVVPPSSHPLDYFSGRDAPGALVPDDMTWMSLHPQNPALNDQMGKSYLRSWNR 371
              +P ++  +DY +GRD   +L+ DDM W++L PQNPAL+D +GKSYLRSWN+
Sbjct: 807  TSLPQAALSMDYINGRDTTSSLMSDDMGWVTL-PQNPALHDPVGKSYLRSWNQ 858


>emb|CAN68271.1| hypothetical protein VITISV_029912 [Vitis vinifera]
          Length = 875

 Score =  140 bits (354), Expect = 3e-31
 Identities = 68/168 (40%), Positives = 99/168 (58%), Gaps = 4/168 (2%)
 Frame = -1

Query: 889  GSCLIPRQDPLSAGNIRDWAVTAPRMVAPSQSHVNTGDFIGLHWFSSDHHVRGAWNGSDN 710
            G   IPRQ+  S  N++DW+V + R+  P Q H+N  D +  +W   +H  RG W+GSD 
Sbjct: 708  GRYSIPRQEHFSTVNMQDWSVNSARVSTPLQPHLNGADLLSQNWLPGEHRPRGGWSGSDG 767

Query: 709  GSLS----SQSLATGGNSDHSLFNALSQCSQLRSGSPYESVRHTDQFLAPRNYGVVDAGS 542
              +     S S+   GN+D SLF+ LS C + +SG PYES+  T+ F++ RNYG +  G 
Sbjct: 768  VGVGVGVLSHSIGNRGNTDGSLFSVLSHCREFQSGGPYESMGSTEHFISSRNYGGLGGGI 827

Query: 541  PRINAVVPPSSHPLDYFSGRDAPGALVPDDMTWMSLHPQNPALNDQMG 398
            PR   V+P +++PL++ SG +A      ++M W SL  QN ALND  G
Sbjct: 828  PRSTTVLPQAANPLNFLSGCEAAATPKTNNMGWTSLPHQNSALNDSNG 875


Top