BLASTX nr result

ID: Glycyrrhiza24_contig00017840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017840
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523407.1| PREDICTED: transcriptional corepressor SEUSS...   180   1e-43
ref|XP_003526669.1| PREDICTED: transcriptional corepressor SEUSS...   172   2e-41
ref|XP_003544733.1| PREDICTED: transcriptional corepressor SEUSS...   150   8e-35
ref|XP_003541807.1| PREDICTED: transcriptional corepressor SEUSS...   142   4e-32
ref|XP_002300947.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29

>ref|XP_003523407.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]
          Length = 911

 Score =  180 bits (457), Expect = 1e-43
 Identities = 94/117 (80%), Positives = 103/117 (88%), Gaps = 4/117 (3%)
 Frame = +3

Query: 6    QQQPPSLSGEVDPSDAQSSVQKIIHEMLISSQINGTG----VGSLGNDLKNVNGIPPVSA 173
            QQQ PS+SGE DPSDAQSSVQKIIHEM++SSQING G    VGSLGND+KNVNGI PVSA
Sbjct: 755  QQQQPSISGEPDPSDAQSSVQKIIHEMMMSSQINGNGGMVGVGSLGNDVKNVNGILPVSA 814

Query: 174  NTGFNNSGNGLVSNGTLNSSNTGVGVGSYGTMGFGQSAMPNGIRAAMVNNSVMNGRG 344
            NTG N  GNGLV NGT+NS N+GVGVG+YGTMG GQSAMPNGIR+AMVNNS+MNGRG
Sbjct: 815  NTGLNG-GNGLVGNGTMNS-NSGVGVGNYGTMGLGQSAMPNGIRSAMVNNSIMNGRG 869


>ref|XP_003526669.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]
          Length = 953

 Score =  172 bits (437), Expect = 2e-41
 Identities = 91/117 (77%), Positives = 100/117 (85%), Gaps = 4/117 (3%)
 Frame = +3

Query: 6    QQQPPSLSGEVDPSDAQSSVQKIIHEMLISSQINGTG----VGSLGNDLKNVNGIPPVSA 173
            QQQ  S+SGE DPSDAQSSVQKIIHEM++SSQING G    VGSLGND+KNV+GI PVSA
Sbjct: 797  QQQQSSISGEPDPSDAQSSVQKIIHEMMMSSQINGNGGMVGVGSLGNDVKNVSGILPVSA 856

Query: 174  NTGFNNSGNGLVSNGTLNSSNTGVGVGSYGTMGFGQSAMPNGIRAAMVNNSVMNGRG 344
            NTG N  GNGLV NG +NS N+GVGVG+YGTMG GQSAMPNGIR AMVNNS+MNGRG
Sbjct: 857  NTGLNG-GNGLVGNGPMNS-NSGVGVGNYGTMGLGQSAMPNGIRTAMVNNSIMNGRG 911


>ref|XP_003544733.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]
          Length = 915

 Score =  150 bits (380), Expect = 8e-35
 Identities = 79/117 (67%), Positives = 89/117 (76%), Gaps = 4/117 (3%)
 Frame = +3

Query: 6    QQQPPSLSGEVDPSDAQSSVQKIIHEMLISSQING----TGVGSLGNDLKNVNGIPPVSA 173
            QQQ  SL  E DPSDAQSSVQKIIHEM+ISSQ+NG     G G LGND+KNVNGI P S 
Sbjct: 758  QQQQTSLPAEADPSDAQSSVQKIIHEMMISSQMNGPGGMAGTGLLGNDMKNVNGILPGSN 817

Query: 174  NTGFNNSGNGLVSNGTLNSSNTGVGVGSYGTMGFGQSAMPNGIRAAMVNNSVMNGRG 344
            +TG N SG+GL  NG +NSSN+GVGVG YGTMG G S M NG+R  M +NS+MNGRG
Sbjct: 818  STGLN-SGSGLAGNGAVNSSNSGVGVGGYGTMGLGPSGMTNGMRPVMGHNSIMNGRG 873


>ref|XP_003541807.1| PREDICTED: transcriptional corepressor SEUSS-like [Glycine max]
          Length = 928

 Score =  142 bits (357), Expect = 4e-32
 Identities = 77/119 (64%), Positives = 90/119 (75%), Gaps = 5/119 (4%)
 Frame = +3

Query: 3    QQQQPPSLSGEVDPSDAQSSVQKIIHEMLISSQING----TGVGSLGNDLKNVNGIPPVS 170
            QQQQ  SL  E DPSDAQSSVQKIIHEM++SSQ+NG     G GSLGND+KNVNGI P S
Sbjct: 769  QQQQQTSLPAEADPSDAQSSVQKIIHEMMMSSQMNGPGGMAGAGSLGNDMKNVNGILPGS 828

Query: 171  ANTGFNN-SGNGLVSNGTLNSSNTGVGVGSYGTMGFGQSAMPNGIRAAMVNNSVMNGRG 344
             NTG N+ S +GLV N  +N SN+GVGVG YGT+G G + M NG+R  M +NS+MNGRG
Sbjct: 829  NNTGLNSGSVSGLVGNVAVN-SNSGVGVGGYGTIGLGPAGMTNGMRPVMGHNSIMNGRG 886


>ref|XP_002300947.1| predicted protein [Populus trichocarpa] gi|222842673|gb|EEE80220.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score =  132 bits (332), Expect = 3e-29
 Identities = 73/115 (63%), Positives = 85/115 (73%), Gaps = 5/115 (4%)
 Frame = +3

Query: 12   QPPSLSGEVDPSDAQSSVQKIIHEMLISSQINGT----GVGSLGNDLKNVNGIPPVSANT 179
            Q P+LSGE D  D+QSSVQK +HEM+++SQ+NGT    GVGSLGN++KNVNGI P   NT
Sbjct: 765  QQPTLSGEADHGDSQSSVQKFLHEMMLTSQLNGTGGMVGVGSLGNEVKNVNGILPTGNNT 824

Query: 180  GFNNSGNGLVSNGTLNSSNTGVGVGSYGTM-GFGQSAMPNGIRAAMVNNSVMNGR 341
               N GNGLV NG +NSS  G+G   YGTM G  QS M NGIRAAM NNS+MNGR
Sbjct: 825  VL-NGGNGLVGNGAVNSS--GIGGAGYGTMGGLAQSVMVNGIRAAMGNNSMMNGR 876


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