BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017794
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593032.1| Pentatricopeptide repeat-containing protein ...   632   e-179
ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containi...   600   e-169
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   543   e-152
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   519   e-145
ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...   513   e-143

>ref|XP_003593032.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355482080|gb|AES63283.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 627

 Score =  632 bits (1629), Expect = e-179
 Identities = 314/352 (89%), Positives = 329/352 (93%)
 Frame = +2

Query: 2    MANKLDAATMLGLYNSIQDESAKDNVYVCNSVLRCLTRKGKFDSAMKLFRQMKQDGLVPD 181
            MANKLDA+TML LYN IQ ESAKDNVYVCNSVL CL +KGKFD+ MKLFRQMK DGLVPD
Sbjct: 113  MANKLDASTMLKLYNDIQVESAKDNVYVCNSVLSCLIKKGKFDTTMKLFRQMKHDGLVPD 172

Query: 182  VVTYTTLLAGSVKVKHGYPKALELIQELQHSKLRMDDVIYGAILAVCASNSKWEEAEYYF 361
            +VTY+TL+AG VKVK GYPKALELIQELQ +KLRMDDVIYGAILAVCASN KWEEAEYYF
Sbjct: 173  LVTYSTLIAGCVKVKDGYPKALELIQELQDNKLRMDDVIYGAILAVCASNGKWEEAEYYF 232

Query: 362  NRMKDEGHSPNVYHYSSLLNAYSACGNYKKADALIQDMQSEGLVPNKVILTTLLKVYVRG 541
            N+MK EG SPNVYHYSSLLNAYSACG++ KADALIQDM+SEGL PNKVILTTLLKVYVRG
Sbjct: 233  NQMKSEGRSPNVYHYSSLLNAYSACGDFTKADALIQDMESEGLAPNKVILTTLLKVYVRG 292

Query: 542  GLFEKSRELLDKLESLGYAEDEMPYCVLMDGLAKAGQMHEAKIIFDEMMKKHVRSDGYAH 721
            GLFEKSRELL KLESLGYAEDEMPYCVLMDGLAKA Q HEAKIIFDEMMKKHV SDGYAH
Sbjct: 293  GLFEKSRELLAKLESLGYAEDEMPYCVLMDGLAKARQTHEAKIIFDEMMKKHVMSDGYAH 352

Query: 722  SIMISAFCRAKLFQEAKQLAKDFQTTFNKYDVVIMNSMLCAFCRAGEMESVMETLRKMDE 901
            SI+ISAFCRAKLFQEAKQLAKDFQTTF+KYDVVIMNSMLCAFCRAGEMESVMETLRKMDE
Sbjct: 353  SIIISAFCRAKLFQEAKQLAKDFQTTFDKYDVVIMNSMLCAFCRAGEMESVMETLRKMDE 412

Query: 902  LAISPDYNTFHILIKYFCREKMYLLAYRTMEDMHSKGYQPEEELCSSLIYHL 1057
            LAISPDYNTF+ILIKYFCR+ MYLLAYRT  DMHSKGYQP EELCSSLIYHL
Sbjct: 413  LAISPDYNTFNILIKYFCRKNMYLLAYRTTMDMHSKGYQPAEELCSSLIYHL 464


>ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Glycine max]
          Length = 630

 Score =  600 bits (1548), Expect = e-169
 Identities = 290/351 (82%), Positives = 327/351 (93%)
 Frame = +2

Query: 5    ANKLDAATMLGLYNSIQDESAKDNVYVCNSVLRCLTRKGKFDSAMKLFRQMKQDGLVPDV 184
            ++ LDAA ML LY+SIQ++SAK NV VCNSVL CL +K KF+SA+ LF+QMK DGL+PD+
Sbjct: 116  SHNLDAAKMLQLYHSIQNQSAKINVLVCNSVLSCLIKKAKFNSALNLFQQMKLDGLLPDL 175

Query: 185  VTYTTLLAGSVKVKHGYPKALELIQELQHSKLRMDDVIYGAILAVCASNSKWEEAEYYFN 364
            VTYTTLLAG +K+++GY KALELIQELQH+KL+MD VIYG I+AVCASN+KWEEAEYYFN
Sbjct: 176  VTYTTLLAGCIKIENGYAKALELIQELQHNKLQMDGVIYGTIMAVCASNTKWEEAEYYFN 235

Query: 365  RMKDEGHSPNVYHYSSLLNAYSACGNYKKADALIQDMQSEGLVPNKVILTTLLKVYVRGG 544
            +MKDEGH+PNVYHYSSL+NAYSACGNYKKAD LIQDM+SEGLVPNKVILTTLLKVYV+GG
Sbjct: 236  QMKDEGHTPNVYHYSSLINAYSACGNYKKADMLIQDMKSEGLVPNKVILTTLLKVYVKGG 295

Query: 545  LFEKSRELLDKLESLGYAEDEMPYCVLMDGLAKAGQMHEAKIIFDEMMKKHVRSDGYAHS 724
            LFEKSRELL +L+SLGYAEDEMPYC+ MDGLAKAGQ+HEAK+IFDEMMK HVRSDGYAHS
Sbjct: 296  LFEKSRELLAELKSLGYAEDEMPYCIFMDGLAKAGQIHEAKLIFDEMMKNHVRSDGYAHS 355

Query: 725  IMISAFCRAKLFQEAKQLAKDFQTTFNKYDVVIMNSMLCAFCRAGEMESVMETLRKMDEL 904
            IMISAFCRAKLF+EAKQLAKDF+TT NKYD+VI+NSMLCAFCR GEME VMETL+KMDEL
Sbjct: 356  IMISAFCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRVGEMERVMETLKKMDEL 415

Query: 905  AISPDYNTFHILIKYFCREKMYLLAYRTMEDMHSKGYQPEEELCSSLIYHL 1057
            AI+P YNTFHILIKYFCREKMYLLAYRTM+DMHSKG+QP EELCSSLI HL
Sbjct: 416  AINPGYNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPVEELCSSLISHL 466


>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic [Vitis vinifera]
            gi|298204537|emb|CBI23812.3| unnamed protein product
            [Vitis vinifera]
          Length = 659

 Score =  543 bits (1398), Expect = e-152
 Identities = 262/352 (74%), Positives = 311/352 (88%)
 Frame = +2

Query: 2    MANKLDAATMLGLYNSIQDESAKDNVYVCNSVLRCLTRKGKFDSAMKLFRQMKQDGLVPD 181
            M   L+    L +YNSIQDES ++NV VCNSVL CL R GKF++++KLF QMKQDGL PD
Sbjct: 145  MGKSLNPIKALEIYNSIQDESVRNNVSVCNSVLSCLIRNGKFENSLKLFHQMKQDGLRPD 204

Query: 182  VVTYTTLLAGSVKVKHGYPKALELIQELQHSKLRMDDVIYGAILAVCASNSKWEEAEYYF 361
             VTY+TLLAG +KVKHGY KALEL+QE++ S+L MD VIYG +LAVCASN++ +EAE YF
Sbjct: 205  AVTYSTLLAGCMKVKHGYSKALELVQEMERSRLPMDSVIYGTLLAVCASNNRCKEAENYF 264

Query: 362  NRMKDEGHSPNVYHYSSLLNAYSACGNYKKADALIQDMQSEGLVPNKVILTTLLKVYVRG 541
            N+MKDEGH PNV+HYSSLLNAYSA G+YKKAD L+QDM+S GLVPNKVILTTLLKVYVRG
Sbjct: 265  NQMKDEGHLPNVFHYSSLLNAYSADGDYKKADMLVQDMKSAGLVPNKVILTTLLKVYVRG 324

Query: 542  GLFEKSRELLDKLESLGYAEDEMPYCVLMDGLAKAGQMHEAKIIFDEMMKKHVRSDGYAH 721
            GLFEKSRELL +LE LGYAEDEMPYC+LMDGLAK+ ++ EAK IF+EM KK V+SDGY +
Sbjct: 325  GLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQVKSDGYCY 384

Query: 722  SIMISAFCRAKLFQEAKQLAKDFQTTFNKYDVVIMNSMLCAFCRAGEMESVMETLRKMDE 901
            SIMISAFCR+ L +EAKQLA+DF+ T++KYD+V++N+MLCA+CRAGEMESVM+ +RKMDE
Sbjct: 385  SIMISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDE 444

Query: 902  LAISPDYNTFHILIKYFCREKMYLLAYRTMEDMHSKGYQPEEELCSSLIYHL 1057
            LAISPD+NTFHILIKYFC+EK+YLLAYRTMEDMH+KG+QPEEELCSSLI HL
Sbjct: 445  LAISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLISHL 496


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  519 bits (1336), Expect = e-145
 Identities = 244/352 (69%), Positives = 307/352 (87%)
 Frame = +2

Query: 2    MANKLDAATMLGLYNSIQDESAKDNVYVCNSVLRCLTRKGKFDSAMKLFRQMKQDGLVPD 181
            M   L+ A  L +YNSI DES K+NV++CNSVL CL R GKFD ++KLF +MKQ+GL PD
Sbjct: 156  MGKSLNPAKALEIYNSIADESVKNNVFICNSVLSCLVRSGKFDISLKLFHKMKQNGLTPD 215

Query: 182  VVTYTTLLAGSVKVKHGYPKALELIQELQHSKLRMDDVIYGAILAVCASNSKWEEAEYYF 361
             +TY+TLL+G +K K GY K L+ +QEL+++ L+MD VIYG ILAVCAS+++ EEAE YF
Sbjct: 216  TITYSTLLSGCIKAKDGYSKTLDFVQELKYNGLQMDTVIYGTILAVCASHNRCEEAESYF 275

Query: 362  NRMKDEGHSPNVYHYSSLLNAYSACGNYKKADALIQDMQSEGLVPNKVILTTLLKVYVRG 541
            ++MK+EGH PNV+HYSSLLNAY++ GNYKKA+ L+QDM+S GLVPNKVI TTLLKVYVRG
Sbjct: 276  SQMKNEGHLPNVFHYSSLLNAYASSGNYKKAEELVQDMKSLGLVPNKVIWTTLLKVYVRG 335

Query: 542  GLFEKSRELLDKLESLGYAEDEMPYCVLMDGLAKAGQMHEAKIIFDEMMKKHVRSDGYAH 721
            GLFEKS++LL +LE+LGYAEDEMPYC+LMDGL+KAG++ EA+  FDEM +K+V+SDGYA+
Sbjct: 336  GLFEKSQQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEMKEKNVKSDGYAY 395

Query: 722  SIMISAFCRAKLFQEAKQLAKDFQTTFNKYDVVIMNSMLCAFCRAGEMESVMETLRKMDE 901
            SIMISA+CR +L +EAKQLAK+F+  ++KYDVVI+N+MLCA+CRAG+MESVM+T+RKMDE
Sbjct: 396  SIMISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQTMRKMDE 455

Query: 902  LAISPDYNTFHILIKYFCREKMYLLAYRTMEDMHSKGYQPEEELCSSLIYHL 1057
            LAISP Y TFHILIKYFC++K+YLLAY+TMEDMH KG+QPEEELCS LI+HL
Sbjct: 456  LAISPSYCTFHILIKYFCKQKLYLLAYQTMEDMHRKGHQPEEELCSMLIFHL 507



 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 62/244 (25%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
 Frame = +2

Query: 41   YNSIQDESAKDNVYVCNSVLRCLTRKGKFDSAMKLFRQMKQDGLVPDVVTYTTLLAGSVK 220
            ++ +++E    NV+  +S+L      G +  A +L + MK  GLVP+ V +TTLL   V 
Sbjct: 275  FSQMKNEGHLPNVFHYSSLLNAYASSGNYKKAEELVQDMKSLGLVPNKVIWTTLL--KVY 332

Query: 221  VKHG-YPKALELIQELQHSKLRMDDVIYGAILAVCASNSKWEEAEYYFNRMKDEGHSPNV 397
            V+ G + K+ +L+ EL+      D++ Y  ++   +   + +EA  +F+ MK++    + 
Sbjct: 333  VRGGLFEKSQQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEMKEKNVKSDG 392

Query: 398  YHYSSLLNAYSACGNYKKADALIQDMQSEGLVPNKVILTTLLKVYVRGGLFEKSRELLDK 577
            Y YS +++AY      ++A  L ++ +++    + VIL T+L  Y R G  E   + + K
Sbjct: 393  YAYSIMISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQTMRK 452

Query: 578  LESLGYAEDEMPYCVLMDGLAKAGQMHEAKIIFDEMMKKHVRSDGYAHSIMISAFCRAKL 757
            ++ L  +     + +L+    K      A    ++M +K  + +    S++I    +AK 
Sbjct: 453  MDELAISPSYCTFHILIKYFCKQKLYLLAYQTMEDMHRKGHQPEEELCSMLIFHLGKAKA 512

Query: 758  FQEA 769
            + EA
Sbjct: 513  YTEA 516


>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
            predicted protein [Populus trichocarpa]
          Length = 562

 Score =  513 bits (1320), Expect = e-143
 Identities = 239/352 (67%), Positives = 304/352 (86%)
 Frame = +2

Query: 2    MANKLDAATMLGLYNSIQDESAKDNVYVCNSVLRCLTRKGKFDSAMKLFRQMKQDGLVPD 181
            M   L+ A  L +Y+SI DES K NV++CNS+LRCL R  KFDS+MK F +MK +GL PD
Sbjct: 48   MGTSLNPAKALEIYHSIPDESTKTNVFICNSLLRCLVRNTKFDSSMKFFHKMKNNGLTPD 107

Query: 182  VVTYTTLLAGSVKVKHGYPKALELIQELQHSKLRMDDVIYGAILAVCASNSKWEEAEYYF 361
             +TY+TLLAG +K+K GY KAL+L+QEL ++ L+MD ++YG +LAVCASN++ EEA+ YF
Sbjct: 108  AITYSTLLAGCMKIKDGYSKALDLVQELNYNGLQMDSIMYGTLLAVCASNNRCEEAQSYF 167

Query: 362  NRMKDEGHSPNVYHYSSLLNAYSACGNYKKADALIQDMQSEGLVPNKVILTTLLKVYVRG 541
            N+MKDEGHSPN++HYSSLLNAYS+ GNYKKA+ L+QDM+S GLVPNKVILTTLLKVYVRG
Sbjct: 168  NQMKDEGHSPNIFHYSSLLNAYSSDGNYKKAEELVQDMKSSGLVPNKVILTTLLKVYVRG 227

Query: 542  GLFEKSRELLDKLESLGYAEDEMPYCVLMDGLAKAGQMHEAKIIFDEMMKKHVRSDGYAH 721
            GLFEKSR+LL +L++LG+A++EMPYC+LMDGLAK G + EA+ +F+EM +K V+S GY++
Sbjct: 228  GLFEKSRDLLVELDTLGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVKSGGYSY 287

Query: 722  SIMISAFCRAKLFQEAKQLAKDFQTTFNKYDVVIMNSMLCAFCRAGEMESVMETLRKMDE 901
            SIMIS+FCR  LF+EAK+LA++F+  ++KYDVVI+N++LCA+CR GE ESVM T+RKMDE
Sbjct: 288  SIMISSFCRGGLFEEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTMRKMDE 347

Query: 902  LAISPDYNTFHILIKYFCREKMYLLAYRTMEDMHSKGYQPEEELCSSLIYHL 1057
            LAISPDYNTFHILIKYFC+EK+Y+LAY+TMEDMH KG+QP EELCSSLI HL
Sbjct: 348  LAISPDYNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPMEELCSSLILHL 399