BLASTX nr result

ID: Glycyrrhiza24_contig00017694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017694
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516788.1| PREDICTED: mitochondrial import inner membra...   124   1e-39
ref|XP_003547748.1| PREDICTED: mitochondrial import inner membra...   124   6e-39
ref|XP_003556088.1| PREDICTED: mitochondrial import inner membra...   115   5e-36
ref|XP_002514217.1| mitochondrial import inner membrane transloc...   117   7e-34
ref|XP_004157888.1| PREDICTED: mitochondrial import inner membra...   115   5e-33

>ref|XP_003516788.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Glycine max]
          Length = 200

 Score =  124 bits (311), Expect(2) = 1e-39
 Identities = 59/77 (76%), Positives = 63/77 (81%)
 Frame = -1

Query: 510 DDIXXXXXXXXXXXXAFHFLKGLHNSPKGNRFPGAAQAVRLNAPRIGGSFAVWGGLFSAF 331
           DDI            AFHFLKGL+NSPKG+RF GA QAVRLNAPR+GGSFAVWGGLFSAF
Sbjct: 17  DDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAPRVGGSFAVWGGLFSAF 76

Query: 330 DCTLVYARQKEDPWNSI 280
           DCT+VYARQKEDPWNSI
Sbjct: 77  DCTMVYARQKEDPWNSI 93



 Score = 63.9 bits (154), Expect(2) = 1e-39
 Identities = 35/68 (51%), Positives = 42/68 (61%)
 Frame = -2

Query: 215 GAATGGLLSMRQGMAASARSAAFXXXXXXXXXXXXXXLNKFLSAQQPLPVIAEEMXXXXX 36
           GAATGG LSMRQG+ ASARSAAF              LNKFLSAQQP+P+I +E+     
Sbjct: 96  GAATGGFLSMRQGLGASARSAAFGGVLLALIEGAGIMLNKFLSAQQPMPMIMDELPPQSS 155

Query: 35  PDSAPAGG 12
            + +  GG
Sbjct: 156 TEQSWLGG 163


>ref|XP_003547748.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Glycine max]
          Length = 200

 Score =  124 bits (311), Expect(2) = 6e-39
 Identities = 59/77 (76%), Positives = 63/77 (81%)
 Frame = -1

Query: 510 DDIXXXXXXXXXXXXAFHFLKGLHNSPKGNRFPGAAQAVRLNAPRIGGSFAVWGGLFSAF 331
           DDI            AFHFLKGL+NSPKG+RF GA QAVRLNAPR+GGSFAVWGGLFSAF
Sbjct: 17  DDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAPRVGGSFAVWGGLFSAF 76

Query: 330 DCTLVYARQKEDPWNSI 280
           DCT+VYARQKEDPWNSI
Sbjct: 77  DCTMVYARQKEDPWNSI 93



 Score = 61.6 bits (148), Expect(2) = 6e-39
 Identities = 33/54 (61%), Positives = 37/54 (68%)
 Frame = -2

Query: 215 GAATGGLLSMRQGMAASARSAAFXXXXXXXXXXXXXXLNKFLSAQQPLPVIAEE 54
           GAATGG LSMRQG+ ASARSAAF              LNKFLSAQQP+P+I +E
Sbjct: 96  GAATGGFLSMRQGLGASARSAAFGGVLLALIEGAGIMLNKFLSAQQPMPMIMDE 149


>ref|XP_003556088.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Glycine max]
          Length = 213

 Score =  115 bits (289), Expect(2) = 5e-36
 Identities = 54/79 (68%), Positives = 62/79 (78%)
 Frame = -1

Query: 510 DDIXXXXXXXXXXXXAFHFLKGLHNSPKGNRFPGAAQAVRLNAPRIGGSFAVWGGLFSAF 331
           DDI            AFHFLKGL+N+P+G R   A+QAVRLNAPR+GGSFAVWGGLFS+F
Sbjct: 17  DDIGGAFGMGAVGGSAFHFLKGLYNAPRGARVVAASQAVRLNAPRVGGSFAVWGGLFSSF 76

Query: 330 DCTLVYARQKEDPWNSIFS 274
           DCT+VY RQKEDPWNSIF+
Sbjct: 77  DCTMVYLRQKEDPWNSIFA 95



 Score = 60.5 bits (145), Expect(2) = 5e-36
 Identities = 32/54 (59%), Positives = 37/54 (68%)
 Frame = -2

Query: 215 GAATGGLLSMRQGMAASARSAAFXXXXXXXXXXXXXXLNKFLSAQQPLPVIAEE 54
           GAATGG LSMRQG+ A+ARSAAF              LNKFLSAQQP+P+I +E
Sbjct: 96  GAATGGFLSMRQGLPAAARSAAFGGVLLALIEGAGIMLNKFLSAQQPMPMIVDE 149


>ref|XP_002514217.1| mitochondrial import inner membrane translocase subunit tim17,
           putative [Ricinus communis] gi|223546673|gb|EEF48171.1|
           mitochondrial import inner membrane translocase subunit
           tim17, putative [Ricinus communis]
          Length = 216

 Score =  117 bits (292), Expect(2) = 7e-34
 Identities = 54/79 (68%), Positives = 61/79 (77%)
 Frame = -1

Query: 510 DDIXXXXXXXXXXXXAFHFLKGLHNSPKGNRFPGAAQAVRLNAPRIGGSFAVWGGLFSAF 331
           DDI            AFHF+KG++NSP G R  G  QAVR+NAPR+GGSFAVWGGLFSAF
Sbjct: 17  DDIGGAFGMGAVGGSAFHFIKGIYNSPTGARLIGGTQAVRMNAPRVGGSFAVWGGLFSAF 76

Query: 330 DCTLVYARQKEDPWNSIFS 274
           DCT+VYARQKEDPWNSIF+
Sbjct: 77  DCTMVYARQKEDPWNSIFA 95



 Score = 52.0 bits (123), Expect(2) = 7e-34
 Identities = 32/66 (48%), Positives = 38/66 (57%)
 Frame = -2

Query: 215 GAATGGLLSMRQGMAASARSAAFXXXXXXXXXXXXXXLNKFLSAQQPLPVIAEEMXXXXX 36
           GAATGG LSMRQG+ ASAR+A F              LNK +SAQQ +PV+ +       
Sbjct: 96  GAATGGFLSMRQGLGASARAALFGGILLGLIEGAGIMLNKVMSAQQNMPVMID------- 148

Query: 35  PDSAPA 18
            DSAPA
Sbjct: 149 -DSAPA 153


>ref|XP_004157888.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Cucumis sativus]
          Length = 237

 Score =  115 bits (289), Expect(2) = 5e-33
 Identities = 53/79 (67%), Positives = 60/79 (75%)
 Frame = -1

Query: 510 DDIXXXXXXXXXXXXAFHFLKGLHNSPKGNRFPGAAQAVRLNAPRIGGSFAVWGGLFSAF 331
           DDI            AFHF+KGL+NSP+G R  G  QAVR+NAPR+GGSFAVWGGLFSAF
Sbjct: 17  DDIGGAFGMGAVGGSAFHFIKGLYNSPRGTRIIGGTQAVRMNAPRVGGSFAVWGGLFSAF 76

Query: 330 DCTLVYARQKEDPWNSIFS 274
           DCT+VY RQKEDPWNSI +
Sbjct: 77  DCTMVYVRQKEDPWNSIIA 95



 Score = 50.4 bits (119), Expect(2) = 5e-33
 Identities = 30/67 (44%), Positives = 34/67 (50%)
 Frame = -2

Query: 215 GAATGGLLSMRQGMAASARSAAFXXXXXXXXXXXXXXLNKFLSAQQPLPVIAEEMXXXXX 36
           GAATGG L MRQG A++ARSA F              LNK LS QQ +PV+ EE      
Sbjct: 96  GAATGGFLQMRQGPASAARSALFGGVLLALIEGAGIMLNKVLSQQQNMPVVIEEPAGMGG 155

Query: 35  PDSAPAG 15
               P G
Sbjct: 156 VPGYPTG 162


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