BLASTX nr result

ID: Glycyrrhiza24_contig00017673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017673
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-...   308   5e-82
ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicag...   303   1e-80
ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-...   302   2e-80
gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein...   299   2e-79
ref|XP_002515097.1| dicer-1, putative [Ricinus communis] gi|2235...   279   2e-73

>ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1942

 Score =  308 bits (788), Expect = 5e-82
 Identities = 160/186 (86%), Positives = 165/186 (88%), Gaps = 1/186 (0%)
 Frame = +1

Query: 1    SMLLAIQLKNMISFPVQALKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 180
            SMLLA+QLKNMI++PVQA KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP
Sbjct: 1382 SMLLAVQLKNMINYPVQASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 1441

Query: 181  QKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGE 360
            QKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGE
Sbjct: 1442 QKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGE 1501

Query: 361  SSLFDQEQSISKTERMD-NTXXXXXXXXXXXXXXXXXXYRVLSSKTLADVVEALIGVYYV 537
            SSLFDQE+SISK ERMD +T                  YRVLSSKTLADVVEALIGVYYV
Sbjct: 1502 SSLFDQERSISKIERMDCHTDGYEDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYV 1561

Query: 538  EGGKNA 555
            EGGKNA
Sbjct: 1562 EGGKNA 1567


>ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
            gi|355501635|gb|AES82838.1| Endoribonuclease Dicer-like
            protein [Medicago truncatula]
          Length = 1965

 Score =  303 bits (776), Expect = 1e-80
 Identities = 156/185 (84%), Positives = 162/185 (87%)
 Frame = +1

Query: 1    SMLLAIQLKNMISFPVQALKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 180
            SMLLA+QLKNMI++PVQA KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLK+P
Sbjct: 1405 SMLLAVQLKNMINYPVQASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKHP 1464

Query: 181  QKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGE 360
            QKHEGQLTRMRQQMVSNMVLY+YALSKGLQSYI ADRFAPSRWAAPGVLPVFDEDTKD E
Sbjct: 1465 QKHEGQLTRMRQQMVSNMVLYRYALSKGLQSYILADRFAPSRWAAPGVLPVFDEDTKDEE 1524

Query: 361  SSLFDQEQSISKTERMDNTXXXXXXXXXXXXXXXXXXYRVLSSKTLADVVEALIGVYYVE 540
            SSLFDQE+SI K ERMDNT                  YRVLSSKTLADVVEALIGVYYVE
Sbjct: 1525 SSLFDQERSIFKAERMDNTDEFEDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVE 1584

Query: 541  GGKNA 555
            GGKNA
Sbjct: 1585 GGKNA 1589


>ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1944

 Score =  302 bits (774), Expect = 2e-80
 Identities = 158/186 (84%), Positives = 163/186 (87%), Gaps = 1/186 (0%)
 Frame = +1

Query: 1    SMLLAIQLKNMISFPVQALKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 180
            SMLLA+QLKNMI++PV A KIL ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP
Sbjct: 1384 SMLLAVQLKNMINYPVLASKILGALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 1443

Query: 181  QKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGE 360
            QKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGE
Sbjct: 1444 QKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGE 1503

Query: 361  SSLFDQEQSISKTERMD-NTXXXXXXXXXXXXXXXXXXYRVLSSKTLADVVEALIGVYYV 537
            SSLFDQE+SISK ERMD +T                  YRVLSSKTLADVVEALIGVYYV
Sbjct: 1504 SSLFDQERSISKIERMDCHTNGYEDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYV 1563

Query: 538  EGGKNA 555
            EGGKNA
Sbjct: 1564 EGGKNA 1569


>gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease
            III, bacterial [Medicago truncatula]
          Length = 1939

 Score =  299 bits (765), Expect = 2e-79
 Identities = 157/191 (82%), Positives = 163/191 (85%), Gaps = 6/191 (3%)
 Frame = +1

Query: 1    SMLLAIQLKNMISFPVQA------LKILEALTAASCQETFCYERAELLGDAYLKWVVSRF 162
            SMLLA+QLKNMI++PVQA      LKILEALTAASCQETFCYERAELLGDAYLKWVVSRF
Sbjct: 1373 SMLLAVQLKNMINYPVQASKVSSQLKILEALTAASCQETFCYERAELLGDAYLKWVVSRF 1432

Query: 163  LFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDE 342
            LFLK+PQKHEGQLTRMRQQMVSNMVLY+YALSKGLQSYI ADRFAPSRWAAPGVLPVFDE
Sbjct: 1433 LFLKHPQKHEGQLTRMRQQMVSNMVLYRYALSKGLQSYILADRFAPSRWAAPGVLPVFDE 1492

Query: 343  DTKDGESSLFDQEQSISKTERMDNTXXXXXXXXXXXXXXXXXXYRVLSSKTLADVVEALI 522
            DTKD ESSLFDQE+SI K ERMDNT                  YRVLSSKTLADVVEALI
Sbjct: 1493 DTKDEESSLFDQERSIFKAERMDNTDEFEDEMEDGELESDSSSYRVLSSKTLADVVEALI 1552

Query: 523  GVYYVEGGKNA 555
            GVYYVEGGKNA
Sbjct: 1553 GVYYVEGGKNA 1563


>ref|XP_002515097.1| dicer-1, putative [Ricinus communis] gi|223545577|gb|EEF47081.1|
            dicer-1, putative [Ricinus communis]
          Length = 1543

 Score =  279 bits (714), Expect = 2e-73
 Identities = 148/189 (78%), Positives = 157/189 (83%), Gaps = 4/189 (2%)
 Frame = +1

Query: 1    SMLLAIQLKNMISFPVQALKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 180
            SMLLAIQLK++I + V ALKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP
Sbjct: 979  SMLLAIQLKDIIHYSVPALKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 1038

Query: 181  QKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGE 360
            QKHEGQLTRMRQQMVSNMVLYQYAL KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDG+
Sbjct: 1039 QKHEGQLTRMRQQMVSNMVLYQYALIKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGD 1098

Query: 361  SSLFDQEQSI----SKTERMDNTXXXXXXXXXXXXXXXXXXYRVLSSKTLADVVEALIGV 528
            SSLFDQE+S+     K +  D+                   YRVLSSKTLADVVEALIG+
Sbjct: 1099 SSLFDQEKSLIENKPKVDHADD-GYEDDEIEDGELESDSSSYRVLSSKTLADVVEALIGI 1157

Query: 529  YYVEGGKNA 555
            YYVEGGK A
Sbjct: 1158 YYVEGGKTA 1166


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