BLASTX nr result

ID: Glycyrrhiza24_contig00017661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017661
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-l...   518   e-145
ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-l...   510   e-142
ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   437   e-120
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...   424   e-117

>ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 553

 Score =  518 bits (1333), Expect = e-145
 Identities = 249/274 (90%), Positives = 263/274 (95%), Gaps = 1/274 (0%)
 Frame = -2

Query: 819 KTYVGYRNYICRPRNWERESLRAPSLQSTPGNSGRWFPSPSPL-SRWSEVDSWSSGRDVQ 643
           KTYV YRNYI RPRNWER+SLR PSLQSTPGNSGRWFPSP+P  +RWSEVDS SSGRD+Q
Sbjct: 87  KTYVAYRNYISRPRNWERDSLRTPSLQSTPGNSGRWFPSPTPHGTRWSEVDSLSSGRDLQ 146

Query: 642 SANPVSNHRTSFGSNASDSDRPQHRGVEPAYSFVGMHCIFDQCKASVTVLKFGHMSSDLL 463
           +ANPV NHRTSFGS+ SDSDRP+HRGVE AYSFVGMHCIFDQCKASVTVLKFGHMSSDLL
Sbjct: 147 NANPVYNHRTSFGSSVSDSDRPRHRGVEAAYSFVGMHCIFDQCKASVTVLKFGHMSSDLL 206

Query: 462 AYGASDGTLTVCSVSENPSVIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIAKG 283
           AYGASDGTLTVCSVSENPSVIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIAKG
Sbjct: 207 AYGASDGTLTVCSVSENPSVIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIAKG 266

Query: 282 ICMRVIYGVSSQLCIRFHPVNNNFLSVGNASKEINVFNFSTGRIINKSVFDAEVTSMDLD 103
           IC+RVIYGVSSQLCIRFHPVNNNFLSVGNA+KEINVFNFSTGR+IN+S+FD+EVTSMD D
Sbjct: 267 ICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRVINRSIFDSEVTSMDHD 326

Query: 102 HTGHLIFCGDAQGCIYSVNMNSHTGVLSRSHRNR 1
           HTGHL+FCGDAQGCIYSVNMNSHTGVLSRSHR R
Sbjct: 327 HTGHLLFCGDAQGCIYSVNMNSHTGVLSRSHRYR 360


>ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 514

 Score =  510 bits (1314), Expect = e-142
 Identities = 246/274 (89%), Positives = 260/274 (94%), Gaps = 1/274 (0%)
 Frame = -2

Query: 819 KTYVGYRNYICRPRNWERESLRAPSLQSTPGNSGRWFPSPSPL-SRWSEVDSWSSGRDVQ 643
           KTYV YRNYI RPRNWER+SLR PSLQSTPGNSGRWFPSP+P  +RWSEVDS S GRD+Q
Sbjct: 95  KTYVAYRNYISRPRNWERDSLRTPSLQSTPGNSGRWFPSPTPHGTRWSEVDSLSCGRDLQ 154

Query: 642 SANPVSNHRTSFGSNASDSDRPQHRGVEPAYSFVGMHCIFDQCKASVTVLKFGHMSSDLL 463
           +ANPV NHRTSFGS+ SDSDRP+H GVE AYSFVGMHCIFDQCKASVTVLKFGHMSSDLL
Sbjct: 155 NANPVYNHRTSFGSSISDSDRPRHHGVEAAYSFVGMHCIFDQCKASVTVLKFGHMSSDLL 214

Query: 462 AYGASDGTLTVCSVSENPSVIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIAKG 283
           AYGASDGTLTVCSVSENPSVIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEI KG
Sbjct: 215 AYGASDGTLTVCSVSENPSVIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIGKG 274

Query: 282 ICMRVIYGVSSQLCIRFHPVNNNFLSVGNASKEINVFNFSTGRIINKSVFDAEVTSMDLD 103
           IC+RVIYGVSSQLCIRFHPVNNNFLSVGNA+KEINVFNFSTGR+INKS+FD+EVTSMD D
Sbjct: 275 ICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRVINKSIFDSEVTSMDHD 334

Query: 102 HTGHLIFCGDAQGCIYSVNMNSHTGVLSRSHRNR 1
           HTG+L+FCGDAQGCIYSVNMNSHTGVLSRSHR R
Sbjct: 335 HTGNLLFCGDAQGCIYSVNMNSHTGVLSRSHRYR 368


>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score =  437 bits (1124), Expect = e-120
 Identities = 213/273 (78%), Positives = 239/273 (87%)
 Frame = -2

Query: 819 KTYVGYRNYICRPRNWERESLRAPSLQSTPGNSGRWFPSPSPLSRWSEVDSWSSGRDVQS 640
           K YV YRNYI RPRNWE  SL APS  STPG SGRW PSP+PLS   EVDSWSS RD++S
Sbjct: 67  KGYVAYRNYIRRPRNWE--SLHAPSHSSTPGQSGRWIPSPAPLSLLFEVDSWSSSRDLRS 124

Query: 639 ANPVSNHRTSFGSNASDSDRPQHRGVEPAYSFVGMHCIFDQCKASVTVLKFGHMSSDLLA 460
               S+HRTSF S+ASD+D P  R VEPAYSFVGMHCIFDQCKASVTVLKFG+ SSDLLA
Sbjct: 125 GYQASSHRTSFSSSASDNDPPV-RKVEPAYSFVGMHCIFDQCKASVTVLKFGNKSSDLLA 183

Query: 459 YGASDGTLTVCSVSENPSVIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIAKGI 280
           YGA+DGTLTVC+VS+ PS+IK+L GHSKDVTDFDF+SNNQYIASSS+DK+VRVWEI+KG+
Sbjct: 184 YGAADGTLTVCTVSQPPSIIKELRGHSKDVTDFDFSSNNQYIASSSMDKSVRVWEISKGL 243

Query: 279 CMRVIYGVSSQLCIRFHPVNNNFLSVGNASKEINVFNFSTGRIINKSVFDAEVTSMDLDH 100
           C+RVIYG+SSQLCIRFHPVNNNFLS GNA++EI VFNFSTGR+INK+VFD  VT++D DH
Sbjct: 244 CIRVIYGISSQLCIRFHPVNNNFLSAGNANREITVFNFSTGRVINKAVFDDAVTAVDHDH 303

Query: 99  TGHLIFCGDAQGCIYSVNMNSHTGVLSRSHRNR 1
           TG LIFCGDAQGCIY+VNMNS TG LSRSHRNR
Sbjct: 304 TGQLIFCGDAQGCIYTVNMNSRTGSLSRSHRNR 336


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  436 bits (1120), Expect = e-120
 Identities = 212/273 (77%), Positives = 234/273 (85%)
 Frame = -2

Query: 819 KTYVGYRNYICRPRNWERESLRAPSLQSTPGNSGRWFPSPSPLSRWSEVDSWSSGRDVQS 640
           K Y  YRNYI RPRNW+      PS QSTPGNSGRW  S +P S   EVDSW+S RD++S
Sbjct: 93  KGYTSYRNYIRRPRNWDG----LPSHQSTPGNSGRWLQSTTPPSHLFEVDSWTSSRDLRS 148

Query: 639 ANPVSNHRTSFGSNASDSDRPQHRGVEPAYSFVGMHCIFDQCKASVTVLKFGHMSSDLLA 460
            N  S HRTSF S ASD+D  + RG EPAYSFVGMHCIFDQCKA+VTVLKFGHMSSDLLA
Sbjct: 149 TNLPSTHRTSFSSTASDNDSLRRRGAEPAYSFVGMHCIFDQCKAAVTVLKFGHMSSDLLA 208

Query: 459 YGASDGTLTVCSVSENPSVIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIAKGI 280
           YGASDGTLTVC VS+ PSVIK+L GHSKDVTDFDF+SNNQYIAS+S+DKTVRVWE++KGI
Sbjct: 209 YGASDGTLTVCLVSDPPSVIKKLEGHSKDVTDFDFSSNNQYIASASMDKTVRVWELSKGI 268

Query: 279 CMRVIYGVSSQLCIRFHPVNNNFLSVGNASKEINVFNFSTGRIINKSVFDAEVTSMDLDH 100
           C+RVIYGVSSQLCIRFHPVNNNFLSVGNA++EI VFNFSTGRIINK VFD +VTSMD DH
Sbjct: 269 CIRVIYGVSSQLCIRFHPVNNNFLSVGNANREITVFNFSTGRIINKLVFDDKVTSMDHDH 328

Query: 99  TGHLIFCGDAQGCIYSVNMNSHTGVLSRSHRNR 1
           TGHLIFCGDAQGC+YS +M+SHTG LSRSHR R
Sbjct: 329 TGHLIFCGDAQGCVYSTSMDSHTGALSRSHRYR 361


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 500

 Score =  424 bits (1091), Expect = e-117
 Identities = 205/274 (74%), Positives = 238/274 (86%), Gaps = 1/274 (0%)
 Frame = -2

Query: 819 KTYVGYRNYICRPRNWERESLRAPSLQSTPGNSGRWFPSPSP-LSRWSEVDSWSSGRDVQ 643
           K YV YRNYI RPRNWE + +  PSLQ+TPG+SGRW   PSP LS   + +SWSS R++ 
Sbjct: 85  KGYVSYRNYIRRPRNWENQQI--PSLQTTPGDSGRWLQCPSPPLSHMFDAESWSSSRNL- 141

Query: 642 SANPVSNHRTSFGSNASDSDRPQHRGVEPAYSFVGMHCIFDQCKASVTVLKFGHMSSDLL 463
           S N  S HRTSF S+ SD+DRP+ RGVEPAYSFVGMHCIFDQCK++VTVLKFGHMSS+LL
Sbjct: 142 SGNLASTHRTSFSSSVSDNDRPRRRGVEPAYSFVGMHCIFDQCKSAVTVLKFGHMSSNLL 201

Query: 462 AYGASDGTLTVCSVSENPSVIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIAKG 283
           AYGASDG+LTVC+VSE PSV+KQL GHSKDVTDFDF+SNNQYIASSS+DKTVRVWE+++G
Sbjct: 202 AYGASDGSLTVCTVSEPPSVLKQLKGHSKDVTDFDFSSNNQYIASSSMDKTVRVWELSQG 261

Query: 282 ICMRVIYGVSSQLCIRFHPVNNNFLSVGNASKEINVFNFSTGRIINKSVFDAEVTSMDLD 103
           +C+RVIYGVSSQ CIRFHPVNNNFLS GN +KEI VFNFSTGRII+K+ FDA++TSMD D
Sbjct: 262 LCIRVIYGVSSQFCIRFHPVNNNFLSAGNENKEITVFNFSTGRIIHKAGFDAKITSMDHD 321

Query: 102 HTGHLIFCGDAQGCIYSVNMNSHTGVLSRSHRNR 1
           HTG LIFCGD QG IY V+M+SHTG+LSRSHR+R
Sbjct: 322 HTGQLIFCGDGQGSIYCVSMDSHTGMLSRSHRHR 355


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