BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017660
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ...   203   1e-50
ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containi...   191   5e-47
ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   178   5e-43
emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]   159   2e-37
ref|NP_190700.2| pentatricopeptide repeat-containing protein [Ar...   145   3e-33

>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513563|gb|AES95186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/110 (89%), Positives = 104/110 (94%)
 Frame = -3

Query: 332 RDMVSWNSMIDGYVKVGDLSGAHKLFDVMPERNLVTWNVMISGFLKGRNPGYALKLFREM 153
           RD+VSWNSMIDGYVKVGDLS AHKLFDVMPERNLVTWN +ISG+ KGRNPGYALKLFREM
Sbjct: 201 RDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREM 260

Query: 152 GRLGLRGNARTMVCVVTACGRSGRLKEGRSVHGSMIRVFMRSSLILDTAL 3
           GRL +R NARTMVC VTACGRSGRLKEG+SVHGSMIR+FMRSSLILDTAL
Sbjct: 261 GRLRIRENARTMVCAVTACGRSGRLKEGKSVHGSMIRLFMRSSLILDTAL 310



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
 Frame = -3

Query: 311 SMIDGYVKVGDLSGAHKLFDVMPERNLVTWNVMISGFLKGRNPGYALKLF---------- 162
           ++ID Y K G +  A K+F+ M  RNLV+WN MI G     NP   L LF          
Sbjct: 309 ALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMILGHCIHGNPEDGLSLFDLMVGMERVK 368

Query: 161 ----------REMGRLGLRGNARTMVCVVTACGRSGRLKEGRSVHGSMIRVF 36
                      + G + L  +  T + ++ AC R+  L EGRS    MI VF
Sbjct: 369 GEVEVDESSSADRGLVRLLPDEITFIGILCACARAELLSEGRSYFKQMIDVF 420


>ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Glycine max]
          Length = 579

 Score =  191 bits (485), Expect = 5e-47
 Identities = 89/110 (80%), Positives = 104/110 (94%)
 Frame = -3

Query: 332 RDMVSWNSMIDGYVKVGDLSGAHKLFDVMPERNLVTWNVMISGFLKGRNPGYALKLFREM 153
           RD+VSWNS+I+G++ VG+L+ AH+LFD MPERNLVTWNVMISG+LKGRNPGYA+KLFREM
Sbjct: 203 RDLVSWNSIINGHMMVGELNAAHRLFDKMPERNLVTWNVMISGYLKGRNPGYAMKLFREM 262

Query: 152 GRLGLRGNARTMVCVVTACGRSGRLKEGRSVHGSMIRVFMRSSLILDTAL 3
           GRLGLRGNARTMVCV TACGRSGRLKE +SVHGS++R+ +RSSLILDTAL
Sbjct: 263 GRLGLRGNARTMVCVATACGRSGRLKEAKSVHGSIVRMSLRSSLILDTAL 312


>ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g51320-like [Glycine max]
          Length = 560

 Score =  178 bits (451), Expect = 5e-43
 Identities = 84/110 (76%), Positives = 101/110 (91%)
 Frame = -3

Query: 332 RDMVSWNSMIDGYVKVGDLSGAHKLFDVMPERNLVTWNVMISGFLKGRNPGYALKLFREM 153
           RD+VS NS+IDG + VG+L+ AH+L + MP+RNLVTWNVMISG+LKGRNPGYA+KLFREM
Sbjct: 220 RDLVSRNSIIDGIMMVGELNAAHRLLNEMPDRNLVTWNVMISGYLKGRNPGYAMKLFREM 279

Query: 152 GRLGLRGNARTMVCVVTACGRSGRLKEGRSVHGSMIRVFMRSSLILDTAL 3
           GRLGLRG+ARTMVCV TACGRSGRLKEG+SV+GS++R+ +RSSLILDT L
Sbjct: 280 GRLGLRGDARTMVCVATACGRSGRLKEGKSVYGSIVRMLVRSSLILDTVL 329



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/91 (37%), Positives = 45/91 (49%)
 Frame = -3

Query: 308 MIDGYVKVGDLSGAHKLFDVMPERNLVTWNVMISGFLKGRNPGYALKLFREMGRLGLRGN 129
           +ID Y K   +  A ++F+ M ERNLV+WN MI G     +P   L LF  M    +   
Sbjct: 329 LIDMYCKCRKVEDARRVFERMGERNLVSWNAMILGHCIRGSPEDGLGLFDVMIGSKVAPX 388

Query: 128 ARTMVCVVTACGRSGRLKEGRSVHGSMIRVF 36
             T + V+ AC R+  L EGRS    M   F
Sbjct: 389 XSTFIGVLCACARAEMLAEGRSFFKQMTDAF 419


>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/110 (69%), Positives = 89/110 (80%)
 Frame = -3

Query: 332 RDMVSWNSMIDGYVKVGDLSGAHKLFDVMPERNLVTWNVMISGFLKGRNPGYALKLFREM 153
           RD+VSWNS+ID Y K+G L  AH+LFD MPERN V+WN+M+ G+LKG NPG ALKLFREM
Sbjct: 534 RDLVSWNSIIDAYAKLGHLVLAHRLFDAMPERNAVSWNIMMGGYLKGGNPGCALKLFREM 593

Query: 152 GRLGLRGNARTMVCVVTACGRSGRLKEGRSVHGSMIRVFMRSSLILDTAL 3
              GLRG   TMV V+TAC RS RLKEGRS+HG +IR F++SSLILDTAL
Sbjct: 594 ANAGLRGGETTMVSVLTACCRSARLKEGRSIHGVLIRTFLKSSLILDTAL 643


>ref|NP_190700.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122230198|sp|Q0WVU0.1|PP278_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g51320 gi|110741620|dbj|BAE98758.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332645257|gb|AEE78778.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 530

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/110 (59%), Positives = 87/110 (79%)
 Frame = -3

Query: 332 RDMVSWNSMIDGYVKVGDLSGAHKLFDVMPERNLVTWNVMISGFLKGRNPGYALKLFREM 153
           RD+VSWNS+I G V+ GD+  AHKLFD MP++N+++WN+MIS +L   NPG ++ LFREM
Sbjct: 182 RDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM 241

Query: 152 GRLGLRGNARTMVCVVTACGRSGRLKEGRSVHGSMIRVFMRSSLILDTAL 3
            R G +GN  T+V ++ ACGRS RLKEGRSVH S+IR F+ SS+++DTAL
Sbjct: 242 VRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTAL 291



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/92 (35%), Positives = 49/92 (53%)
 Frame = -3

Query: 311 SMIDGYVKVGDLSGAHKLFDVMPERNLVTWNVMISGFLKGRNPGYALKLFREMGRLGLRG 132
           ++ID Y K  ++  A ++FD +  RN VTWNVMI        P   L+LF  M    LR 
Sbjct: 290 ALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRP 349

Query: 131 NARTMVCVVTACGRSGRLKEGRSVHGSMIRVF 36
           +  T V V+  C R+G + +G+S +  M+  F
Sbjct: 350 DEVTFVGVLCGCARAGLVSQGQSYYSLMVDEF 381