BLASTX nr result

ID: Glycyrrhiza24_contig00017656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017656
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545375.1| PREDICTED: putative GATA transcription facto...   229   2e-57
ref|XP_003588994.1| GATA transcription factor [Medicago truncatu...   174   6e-41
gb|ACJ84046.1| unknown [Medicago truncatula]                          173   1e-40
gb|ABK96296.1| unknown [Populus trichocarpa x Populus deltoides]      127   6e-27
gb|ABK96478.1| unknown [Populus trichocarpa x Populus deltoides]      127   8e-27

>ref|XP_003545375.1| PREDICTED: putative GATA transcription factor 22-like [Glycine max]
          Length = 306

 Score =  229 bits (583), Expect = 2e-57
 Identities = 160/354 (45%), Positives = 186/354 (52%), Gaps = 15/354 (4%)
 Frame = +3

Query: 39   MTPVSLNPPPARGPSLQGQNNQLFNVSPNNQDYRTTLLNFLDPRQTLQIVGDHQLRESDH 218
            MTP SLNPP   GPS+Q   NQLFN+SPNNQD RT   N  DPRQT   +G   LRE+  
Sbjct: 1    MTPYSLNPP---GPSIQAGQNQLFNISPNNQDCRT-FFNIFDPRQTSIEIGG--LREN-- 52

Query: 219  RHQGDNKVVLQDGXXXXXXXXXXXXXXXXPDQPAVLMDHDQSSAYDTNLSFSKMEEVEEA 398
             ++ D+K++L DG                  +  V++D   S+    NL         E 
Sbjct: 53   -YRQDDKMILHDGSSSNCNSSFNISP-----ETVVMVDPLSSACDRRNLP-------SEE 99

Query: 399  DSSKMGHGSA-KWMSSKMXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXGIADKAIN 575
            +S    HGS  KWMSSKM                                     DKAIN
Sbjct: 100  ESKNNDHGSGNKWMSSKMRLMKKMMRPSISPT----------------------TDKAIN 137

Query: 576  XXXXXXXXXXRFQNQQGHENIRYSQRSPRNNSANSNTTRVCSDCNTSSTPLWRSGPMGPK 755
                      RFQN QG E+ RYSQRSPRNN+ +S T RVCSDCNTS+TPLWR+GP GPK
Sbjct: 138  SSP-------RFQNHQGLESRRYSQRSPRNNNGSS-TPRVCSDCNTSTTPLWRTGPKGPK 189

Query: 756  SLCNACGIRQRKARKAMQEAENGEATDGASTKSRVHNKEKKPRTNXXXXXXXXXXXXQLA 935
            SLCNACGIRQRKAR+AM EA NG  T  A  K+R+HNKEKK R N               
Sbjct: 190  SLCNACGIRQRKARRAMAEAANGLVTPIACEKTRLHNKEKKSRMNHFAQFKNKYKSTTTT 249

Query: 936  QGTE------VKKLEC---FAIGLRNNSG-----FPMDEASEAALLLMDLSCGF 1055
              T       V+KLE    FAI LR+N+      FP DE +EAALLLMDLSCGF
Sbjct: 250  TTTTVGSSEGVRKLEYFNNFAISLRSNNSDFEQMFPRDEVAEAALLLMDLSCGF 303


>ref|XP_003588994.1| GATA transcription factor [Medicago truncatula]
            gi|355478042|gb|AES59245.1| GATA transcription factor
            [Medicago truncatula]
          Length = 305

 Score =  174 bits (440), Expect = 6e-41
 Identities = 137/344 (39%), Positives = 165/344 (47%), Gaps = 6/344 (1%)
 Frame = +3

Query: 39   MTPVSLNPPPARGPS--LQGQNNQLFNVSPNNQDYRTTLLNFLDPRQTLQIVGDHQLRES 212
            MTPVSLNPP   GP+  LQGQN Q FN+SP NQD  T             ++GD      
Sbjct: 1    MTPVSLNPP---GPNSLLQGQN-QFFNISPVNQDTPTFF----------NLLGDFGENYD 46

Query: 213  DHRHQGDNKVVLQDGXXXXXXXXXXXXXXXXPDQPAVLMDHDQSSAYDTNLSFSKMEEVE 392
             H HQ        DG                    +V++D   SSA DTNLS S   E+E
Sbjct: 47   HHHHQDHKLAFHHDGSSSSNHQQQLYNS----SSESVMVD--SSSARDTNLSSSL--ELE 98

Query: 393  EADSSKMGHGSAKWMSSKMXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXGIADKAI 572
            ++ S K  HGS KW+SSKM                                     DKAI
Sbjct: 99   DS-SKKNSHGSEKWISSKMRLMNKMINTTATVATT--------PIMRPNNSIAATTDKAI 149

Query: 573  NXXXXXXXXXXRFQNQQGHENIRYSQRSPRNNSANSNTTRVCSDCNTSSTPLWRSGPMGP 752
                        F     ++N+RYSQ SP +NS N NT RVCSDC+TS TPLWRSGPMGP
Sbjct: 150  KTTTPMMSPS-NFGTSPRNQNVRYSQTSPSSNSGN-NTVRVCSDCSTSHTPLWRSGPMGP 207

Query: 753  KSLCNACGIRQRKARKAMQEAENGEATDGASTKSRVHNKEK----KPRTNXXXXXXXXXX 920
            KSLCNACGIRQRKAR+AM EA NG AT   S K++V   +K    K +            
Sbjct: 208  KSLCNACGIRQRKARRAMAEAANGLAT---SPKTKVLKIKKPTQFKTKNKASTSTSSTST 264

Query: 921  XXQLAQGTEVKKLECFAIGLRNNSGFPMDEASEAALLLMDLSCG 1052
                +   +VKKLE FA+       +  DEA+ AA LL+D+S G
Sbjct: 265  TSAGSSSQDVKKLESFAL------DYDYDEAATAARLLVDISSG 302


>gb|ACJ84046.1| unknown [Medicago truncatula]
          Length = 304

 Score =  173 bits (438), Expect = 1e-40
 Identities = 138/344 (40%), Positives = 166/344 (48%), Gaps = 6/344 (1%)
 Frame = +3

Query: 39   MTPVSLNPPPARGPS--LQGQNNQLFNVSPNNQDYRTTLLNFLDPRQTLQIVGDHQLRES 212
            MTPVSLNPP   GP+  LQGQN Q FN+SP NQD  T             ++GD      
Sbjct: 1    MTPVSLNPP---GPNSLLQGQN-QFFNISPVNQDTPTFF----------NLLGDFG-ENY 45

Query: 213  DHRHQGDNKVVLQDGXXXXXXXXXXXXXXXXPDQPAVLMDHDQSSAYDTNLSFSKMEEVE 392
            DH HQ        DG                    +V++D   SSA DTNLS S   E+E
Sbjct: 46   DHHHQDHKLAFHHDGSSSSNHQQQLYNS----SSESVMVD--SSSARDTNLSSSL--ELE 97

Query: 393  EADSSKMGHGSAKWMSSKMXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXGIADKAI 572
            ++ S K  HGS KW+SSKM                                     DKAI
Sbjct: 98   DS-SKKNSHGSEKWISSKMRLMNKMINTTATVATT--------PIMRPNNSIAATTDKAI 148

Query: 573  NXXXXXXXXXXRFQNQQGHENIRYSQRSPRNNSANSNTTRVCSDCNTSSTPLWRSGPMGP 752
                        F     ++N+RYSQ SP +NS N NT RVCSDC+TS TPLWRSGPMGP
Sbjct: 149  KTTTPMMSPS-NFGTSPRNQNVRYSQTSPSSNSGN-NTVRVCSDCSTSHTPLWRSGPMGP 206

Query: 753  KSLCNACGIRQRKARKAMQEAENGEATDGASTKSRVHNKEK----KPRTNXXXXXXXXXX 920
            KSLCNACGIRQRKAR+AM EA NG AT   S K++V   +K    K +            
Sbjct: 207  KSLCNACGIRQRKARRAMAEAANGLAT---SPKTKVLKIKKPTQFKTKNKASTSTSSTST 263

Query: 921  XXQLAQGTEVKKLECFAIGLRNNSGFPMDEASEAALLLMDLSCG 1052
                +   +VKKLE FA+       +  DEA+ AA LL+D+S G
Sbjct: 264  TSAGSSSQDVKKLESFAL------DYDYDEAATAARLLVDISSG 301


>gb|ABK96296.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 306

 Score =  127 bits (319), Expect = 6e-27
 Identities = 80/162 (49%), Positives = 96/162 (59%), Gaps = 9/162 (5%)
 Frame = +3

Query: 606  RFQNQQGHENIRYSQRSPRNNSANSNTTRVCSDCNTSSTPLWRSGPMGPKSLCNACGIRQ 785
            +F NQQ   N+     +  N+S+NSN  RVCSDCNT+STPLWRSGP GPKSLCNACGIRQ
Sbjct: 152  KFHNQQCQNNV-----NDINSSSNSNI-RVCSDCNTTSTPLWRSGPRGPKSLCNACGIRQ 205

Query: 786  RKARKAMQEAENGEATD---GASTKSRVHNKEKKPRTNXXXXXXXXXXXXQLAQGTEVKK 956
            RKAR+AM  AENG        +STKS+V++K KK RT+                    KK
Sbjct: 206  RKARRAMAAAENGAVISVEASSSTKSKVNSKVKKLRTSHVVQGKKLSNKPPNPPLQSQKK 265

Query: 957  LECF---AIGLRNNSGFPM---DEASEAALLLMDLSCGFFRS 1064
            L CF   A+ L  N         +  EAA+LLM+LSCGF  S
Sbjct: 266  L-CFKNLALSLSKNPVLRQVLPHDVEEAAILLMELSCGFIHS 306


>gb|ABK96478.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 303

 Score =  127 bits (318), Expect = 8e-27
 Identities = 80/162 (49%), Positives = 95/162 (58%), Gaps = 9/162 (5%)
 Frame = +3

Query: 606  RFQNQQGHENIRYSQRSPRNNSANSNTTRVCSDCNTSSTPLWRSGPMGPKSLCNACGIRQ 785
            +F NQQ        Q +  N+S+NSN  RVCSDCNT+STPLWRSGP GPKSLCNACGIRQ
Sbjct: 151  KFHNQQ-------CQNNDINSSSNSNI-RVCSDCNTTSTPLWRSGPRGPKSLCNACGIRQ 202

Query: 786  RKARKAMQEAENGEATD---GASTKSRVHNKEKKPRTNXXXXXXXXXXXXQLAQGTEVKK 956
            RKAR+AM  AENG        +STKS+V++K KK RT+                    KK
Sbjct: 203  RKARRAMAAAENGAVISVEASSSTKSKVNSKVKKLRTSHVVQGKKLSNKPPNPPLQSQKK 262

Query: 957  LECF---AIGLRNNSGFPM---DEASEAALLLMDLSCGFFRS 1064
            L CF   A+ L  N         +  EAA+LLM+LSCGF  S
Sbjct: 263  L-CFKNLALSLSKNPALRQVLPHDVEEAAILLMELSCGFIHS 303


Top