BLASTX nr result

ID: Glycyrrhiza24_contig00017646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017646
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628876.1| Rhamnogalacturonate lyase [Medicago truncatu...   245   2e-63
ref|XP_003628875.1| Rhamnogalacturonate lyase [Medicago truncatu...   238   5e-61
ref|XP_003628880.1| Rhamnogalacturonate lyase [Medicago truncatu...   232   2e-59
ref|XP_003531974.1| PREDICTED: LOW QUALITY PROTEIN: probable rha...   212   2e-53
ref|XP_003533427.1| PREDICTED: rhamnogalacturonate lyase-like [G...   202   2e-50

>ref|XP_003628876.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355522898|gb|AET03352.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 694

 Score =  245 bits (626), Expect = 2e-63
 Identities = 113/130 (86%), Positives = 121/130 (93%)
 Frame = +3

Query: 6   DSDAPVGLWMVTPSNEFRNAGPIKQDLTSHVGPIALSMFVSTHYAGKEVTMAFQEGETYK 185
           DSD PVG WM+TPSNEFRN GPIKQDLTSHVGPIALSMFVSTHYAGKEVTMAFQEGETYK
Sbjct: 277 DSDPPVGFWMITPSNEFRNGGPIKQDLTSHVGPIALSMFVSTHYAGKEVTMAFQEGETYK 336

Query: 186 KVFGPVFVYVNSASSQNDTLSLWSDASQQLSKEVQSWPYNFPQSQDFVPPNQRGTVFGRL 365
           KVFGPVFVY+N+ASS+ND  +LWSDA QQLSKEVQSWPY+FPQSQD+ PPNQRG VFGRL
Sbjct: 337 KVFGPVFVYLNTASSENDNATLWSDAVQQLSKEVQSWPYDFPQSQDYFPPNQRGAVFGRL 396

Query: 366 LVQDWYIKGG 395
           LVQDWY +GG
Sbjct: 397 LVQDWYFEGG 406


>ref|XP_003628875.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355522897|gb|AET03351.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 684

 Score =  238 bits (606), Expect = 5e-61
 Identities = 108/130 (83%), Positives = 120/130 (92%)
 Frame = +3

Query: 6   DSDAPVGLWMVTPSNEFRNAGPIKQDLTSHVGPIALSMFVSTHYAGKEVTMAFQEGETYK 185
           DSD PVG WM+TPSNEFRN GPIKQDLTSHVGPI LSMFVSTHYAGKEVTMAF+EGETYK
Sbjct: 269 DSDEPVGFWMITPSNEFRNGGPIKQDLTSHVGPITLSMFVSTHYAGKEVTMAFEEGETYK 328

Query: 186 KVFGPVFVYVNSASSQNDTLSLWSDASQQLSKEVQSWPYNFPQSQDFVPPNQRGTVFGRL 365
           KVFGPVFVY+N+ SS+ND  +LWSDA QQLSKEV+SWPY+FP+SQD+ PPNQRG VFGRL
Sbjct: 329 KVFGPVFVYLNTDSSKNDNTTLWSDAVQQLSKEVKSWPYDFPKSQDYFPPNQRGAVFGRL 388

Query: 366 LVQDWYIKGG 395
           LVQDWY++GG
Sbjct: 389 LVQDWYLQGG 398


>ref|XP_003628880.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355522902|gb|AET03356.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 688

 Score =  232 bits (592), Expect = 2e-59
 Identities = 105/131 (80%), Positives = 116/131 (88%)
 Frame = +3

Query: 3   LDSDAPVGLWMVTPSNEFRNAGPIKQDLTSHVGPIALSMFVSTHYAGKEVTMAFQEGETY 182
           LDSD  VG WM+TPSNEFRN GPIKQDLTSH GPI LSMFVS HYAGK+VTM F+EGETY
Sbjct: 272 LDSDPTVGFWMITPSNEFRNGGPIKQDLTSHAGPITLSMFVSPHYAGKDVTMEFEEGETY 331

Query: 183 KKVFGPVFVYVNSASSQNDTLSLWSDASQQLSKEVQSWPYNFPQSQDFVPPNQRGTVFGR 362
           KKVFGP+FVY+N+ASS+ND  +LWSDA QQ SKEVQSWPY+FPQS+D+ PPNQRG VFGR
Sbjct: 332 KKVFGPIFVYLNTASSENDNATLWSDAVQQFSKEVQSWPYDFPQSKDYFPPNQRGAVFGR 391

Query: 363 LLVQDWYIKGG 395
           LLVQDWY KGG
Sbjct: 392 LLVQDWYFKGG 402


>ref|XP_003531974.1| PREDICTED: LOW QUALITY PROTEIN: probable rhamnogalacturonate lyase
           B-like [Glycine max]
          Length = 685

 Score =  212 bits (540), Expect = 2e-53
 Identities = 102/129 (79%), Positives = 113/129 (87%), Gaps = 1/129 (0%)
 Frame = +3

Query: 9   SDAP-VGLWMVTPSNEFRNAGPIKQDLTSHVGPIALSMFVSTHYAGKEVTMAFQEGETYK 185
           S+AP VG WM+TPSNEFRNAGPIKQDLTSHVGPI L+MF+STHYAGKEVTMAFQ+GETYK
Sbjct: 268 SNAPSVGFWMITPSNEFRNAGPIKQDLTSHVGPITLAMFMSTHYAGKEVTMAFQQGETYK 327

Query: 186 KVFGPVFVYVNSASSQNDTLSLWSDASQQLSKEVQSWPYNFPQSQDFVPPNQRGTVFGRL 365
           KVFGPVF Y N+AS ++D LSLWSDA QQ SKEV SWPY+FP+S DF+PPNQRG V GRL
Sbjct: 328 KVFGPVFAYFNNASREDDILSLWSDAVQQQSKEVTSWPYDFPKSVDFIPPNQRGIVLGRL 387

Query: 366 LVQDWYIKG 392
           LVQD  I G
Sbjct: 388 LVQDRXIGG 396


>ref|XP_003533427.1| PREDICTED: rhamnogalacturonate lyase-like [Glycine max]
          Length = 657

 Score =  202 bits (515), Expect = 2e-50
 Identities = 95/127 (74%), Positives = 109/127 (85%)
 Frame = +3

Query: 6   DSDAPVGLWMVTPSNEFRNAGPIKQDLTSHVGPIALSMFVSTHYAGKEVTMAFQEGETYK 185
           D  APVG W++TPSNEFR+AGP+KQDLTSHVGP  LSMFVSTHYAGKEVTMAF EGETYK
Sbjct: 240 DGLAPVGFWLITPSNEFRHAGPVKQDLTSHVGPTTLSMFVSTHYAGKEVTMAFGEGETYK 299

Query: 186 KVFGPVFVYVNSASSQNDTLSLWSDASQQLSKEVQSWPYNFPQSQDFVPPNQRGTVFGRL 365
           KVFGPVFVY+NS  +++   SLWSDA +QLS EV+ WPY+F  S+DF+PPNQRGTV GRL
Sbjct: 300 KVFGPVFVYLNSVPNKSQFRSLWSDAVEQLSNEVRRWPYDFVGSKDFLPPNQRGTVTGRL 359

Query: 366 LVQDWYI 386
           LVQD Y+
Sbjct: 360 LVQDGYM 366


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