BLASTX nr result

ID: Glycyrrhiza24_contig00017637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017637
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated...   156   1e-36
ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated...   156   1e-36
ref|XP_003609891.1| SWI/SNF-related matrix-associated actin-depe...   140   1e-31
ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated...   116   2e-24
gb|ADN34040.1| chromatin remodelling complex ATPase chain isw-1 ...   112   4e-23

>ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A-like protein 1-like
           [Glycine max]
          Length = 751

 Score =  156 bits (395), Expect = 1e-36
 Identities = 83/108 (76%), Positives = 87/108 (80%)
 Frame = -2

Query: 324 TTNHSERFXXXXXPVSRPQRVDALSQGARALPTSVKSGTKNDEHSKELPKVSVKFFLHSS 145
           TTNH         P SRPQ    LSQ ARALPTS KSGT ND+ SKELPK SVKFFLHSS
Sbjct: 89  TTNH---LPPKPLPDSRPQTAGTLSQAARALPTSFKSGTNNDKQSKELPKFSVKFFLHSS 145

Query: 144 GNVAAKFQYDQVVVAAFRRIPKSSWNAKERLWMFPLSSLSEAEKVLRE 1
           GNVAAKFQYDQVV+AAFRRIP+SSWNAKERLW+FPLSSL EAEKVL E
Sbjct: 146 GNVAAKFQYDQVVIAAFRRIPRSSWNAKERLWIFPLSSLLEAEKVLGE 193


>ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A-like protein 1-like
           [Glycine max]
          Length = 665

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/91 (83%), Positives = 84/91 (92%)
 Frame = -2

Query: 273 PQRVDALSQGARALPTSVKSGTKNDEHSKELPKVSVKFFLHSSGNVAAKFQYDQVVVAAF 94
           P +VDA SQGARALPT++KSGT ND  +KELPK SVKFFLHSSGNVAAKFQYDQVV+AAF
Sbjct: 40  PIQVDAFSQGARALPTTLKSGTNNDNQAKELPKFSVKFFLHSSGNVAAKFQYDQVVIAAF 99

Query: 93  RRIPKSSWNAKERLWMFPLSSLSEAEKVLRE 1
           RRIP+SSWNAKERLW+FPLSSLSEAEKV+ E
Sbjct: 100 RRIPRSSWNAKERLWIFPLSSLSEAEKVIGE 130


>ref|XP_003609891.1| SWI/SNF-related matrix-associated actin-dependent regulator of
           chromatin subfamily A-like protein [Medicago truncatula]
           gi|355510946|gb|AES92088.1| SWI/SNF-related
           matrix-associated actin-dependent regulator of chromatin
           subfamily A-like protein [Medicago truncatula]
          Length = 764

 Score =  140 bits (353), Expect = 1e-31
 Identities = 72/94 (76%), Positives = 80/94 (85%), Gaps = 1/94 (1%)
 Frame = -2

Query: 279 SRPQRVDALSQG-ARALPTSVKSGTKNDEHSKELPKVSVKFFLHSSGNVAAKFQYDQVVV 103
           SRPQRVDAL QG AR LP +  +     EHSKEL K SVKFFLHS+GN+AAKFQYDQV+V
Sbjct: 41  SRPQRVDALPQGPARPLPNNTNNAV---EHSKELTKASVKFFLHSTGNIAAKFQYDQVIV 97

Query: 102 AAFRRIPKSSWNAKERLWMFPLSSLSEAEKVLRE 1
           AAFRRIPKS WNAKERLW+FPLSSLSEAEKVL++
Sbjct: 98  AAFRRIPKSFWNAKERLWLFPLSSLSEAEKVLKD 131


>ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A-like protein 1 [Vitis
           vinifera] gi|297736823|emb|CBI26024.3| unnamed protein
           product [Vitis vinifera]
          Length = 677

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/93 (66%), Positives = 70/93 (75%)
 Frame = -2

Query: 279 SRPQRVDALSQGARALPTSVKSGTKNDEHSKELPKVSVKFFLHSSGNVAAKFQYDQVVVA 100
           S P++VD L  G+R  P S    T     SKEL K+SVKFFLH+SGN+AAKF YD VVV 
Sbjct: 54  SLPRKVDDLPPGSRIPPPS----TVVSNCSKELHKLSVKFFLHASGNIAAKFSYDPVVVG 109

Query: 99  AFRRIPKSSWNAKERLWMFPLSSLSEAEKVLRE 1
           AFR+I K+SWNAKERLWMFPLSSLS AEKVL E
Sbjct: 110 AFRKISKASWNAKERLWMFPLSSLSSAEKVLHE 142


>gb|ADN34040.1| chromatin remodelling complex ATPase chain isw-1 [Cucumis melo
           subsp. melo]
          Length = 224

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/94 (60%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
 Frame = -2

Query: 279 SRPQRVDALSQGARALPTSVKSGTK-NDEHSKELPKVSVKFFLHSSGNVAAKFQYDQVVV 103
           SR + V+  S  A  LP+S  +     +E +KE PK+SVKFFLHSSGN+AAKF YDQV+V
Sbjct: 98  SRSRAVENASPLAGVLPSSAAAKEHVGEEGAKERPKLSVKFFLHSSGNIAAKFSYDQVLV 157

Query: 102 AAFRRIPKSSWNAKERLWMFPLSSLSEAEKVLRE 1
            AFR+IPK++WN KERLWMFP+SSLS AE  LR+
Sbjct: 158 DAFRKIPKATWNGKERLWMFPISSLSVAESALRD 191


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