BLASTX nr result

ID: Glycyrrhiza24_contig00017529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017529
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08764.1| hypothetical protein MtrDRAFT_AC160012g33v2 [Medi...    77   2e-12
ref|XP_002298855.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
gb|ABD33209.1| Ribonuclease H [Medicago truncatula]                    57   2e-06
ref|XP_003520302.1| PREDICTED: pyruvate kinase, cytosolic isozym...    56   3e-06
ref|XP_003622120.1| Pentatricopeptide repeat-containing protein ...    56   3e-06

>gb|ABN08764.1| hypothetical protein MtrDRAFT_AC160012g33v2 [Medicago truncatula]
          Length = 124

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = -1

Query: 199 DIPDSWVWCNSASGEYSVKSAYSWLCNSD-QLQVDGCWSWLWKLKLPANIHFFLWQFSHA 23
           D PD WVW N  SG YS++  Y WL  +   L  +  W+W+W L +P+NI FFLWQ  H 
Sbjct: 3   DSPDVWVWTNRTSGIYSIQEGYQWLMGAHTSLLGEESWNWIWHLCVPSNIRFFLWQLCHD 62

Query: 22  SIPTRDV 2
           S+P R V
Sbjct: 63  SVPFRSV 69


>ref|XP_002298855.1| predicted protein [Populus trichocarpa] gi|222846113|gb|EEE83660.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
 Frame = -1

Query: 280 WHLESLYTNLTPDIRAILLQVNPCLVDDIPDSWVWCNSASGEYSVKSAYSWLCNSD-QLQ 104
           W+   L TNL  DIR ++  V         D+ +W ++ +  Y+ KSAY WL  S   L 
Sbjct: 654 WNFNHLMTNLPNDIRNLVTTVPIPSYRRSDDNIIWLSNITRIYNPKSAYLWLLKSYVTLN 713

Query: 103 VDGCWSWLWKLKLPANIHFFLW 38
            D  W W+WKLK+P  +   +W
Sbjct: 714 SDRHWFWIWKLKIPEKVQLMIW 735


>gb|ABD33209.1| Ribonuclease H [Medicago truncatula]
          Length = 302

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/90 (34%), Positives = 48/90 (53%)
 Frame = -1

Query: 280 WHLESLYTNLTPDIRAILLQVNPCLVDDIPDSWVWCNSASGEYSVKSAYSWLCNSDQLQV 101
           W  E L+ NL  +I   ++ +   +  D PD+  W  +++ ++ VKSAY+ L   DQ  V
Sbjct: 16  WDNEFLFQNLPENIATRVIALPAPIEVDGPDTIGWRGTSTHQFIVKSAYNLLVR-DQSTV 74

Query: 100 DGCWSWLWKLKLPANIHFFLWQFSHASIPT 11
           DG W  LW+ + P  I  F+W  +H  I T
Sbjct: 75  DGDWKMLWEWRGPHRIQTFMWLVAHGRILT 104


>ref|XP_003520302.1| PREDICTED: pyruvate kinase, cytosolic isozyme-like [Glycine max]
          Length = 584

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = -1

Query: 196 IPDSWVWCNSASGEYSVKSAYSWLCNS-DQLQVDGCWSWLWKLKLPANIHFFLWQFSHAS 20
           I D WVW    SG YS K+AY  L     Q   DG +  LWKLK+P  I  F W+  +  
Sbjct: 18  ISDQWVWKADTSGHYSAKTAYQTLRKDISQENDDGAFGELWKLKIPTKIAAFAWRLINDR 77

Query: 19  IPTR 8
           +PTR
Sbjct: 78  LPTR 81


>ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497135|gb|AES78338.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 894

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = -1

Query: 214 PCLVDDIPDSWVWCNSASGEYSVKSAYSWLCNSDQL----QVDGCWSWLWKLKLPANIHF 47
           P +  D+P   VW     G YSVKSAY  + N D      +V+G W+ +W LKLP  +  
Sbjct: 214 PSVAHDVP---VWMFERDGAYSVKSAYKDILNHDVTVVHHRVEGNWNCIWSLKLPPKVKN 270

Query: 46  FLWQFSHASIPTR 8
           FLW+     +PTR
Sbjct: 271 FLWRACRNCLPTR 283


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