BLASTX nr result

ID: Glycyrrhiza24_contig00017500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017500
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525492.1| PREDICTED: RING-H2 finger protein ATL47-like...    99   7e-19
ref|XP_003550745.1| PREDICTED: RING-H2 finger protein ATL47-like...    99   1e-18
ref|XP_003608945.1| RING finger protein [Medicago truncatula] gi...    92   9e-17
ref|XP_003524456.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-g...    82   2e-13
ref|XP_002521028.1| ring finger protein, putative [Ricinus commu...    81   3e-13

>ref|XP_003525492.1| PREDICTED: RING-H2 finger protein ATL47-like [Glycine max]
          Length = 329

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 57/88 (64%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
 Frame = -2

Query: 410 GGEVVEDEAGSCSLDERRCYFMGSYQYVAPDLNLQVALLSQGGE--KNGNVEGTRIIRNT 237
           GGEV  D  G CSL+ERRCY MGSY+YV  DLNLQV +LS G +  +NGNVEG RI  +T
Sbjct: 246 GGEVGGD--GGCSLNERRCYSMGSYRYVVRDLNLQV-VLSHGDDVLENGNVEGKRIGDST 302

Query: 236 IKGESFSVSKIWLWSNKSKFPSSNVVFP 153
            KGESFSVSKIWLWS  + F  SN  FP
Sbjct: 303 -KGESFSVSKIWLWSKNTTFHDSNAPFP 329


>ref|XP_003550745.1| PREDICTED: RING-H2 finger protein ATL47-like [Glycine max]
          Length = 319

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 56/97 (57%), Positives = 64/97 (65%), Gaps = 7/97 (7%)
 Frame = -2

Query: 422 GQWVGGEVVEDEAGSCSLDERRCYFMGSYQYVAPDLNLQVALLSQGGE-------KNGNV 264
           G++  GEV  D  G CSL ERRCY MGSY+YV  DLNLQV L     +       +NGNV
Sbjct: 226 GKFRNGEVGGD--GGCSLSERRCYSMGSYRYVVRDLNLQVVLSHSQSQDDDDDVLENGNV 283

Query: 263 EGTRIIRNTIKGESFSVSKIWLWSNKSKFPSSNVVFP 153
           EG RI  +T KGESFSVSKIWLWS K++F  SN  FP
Sbjct: 284 EGKRIGDST-KGESFSVSKIWLWSKKTRFHGSNAPFP 319


>ref|XP_003608945.1| RING finger protein [Medicago truncatula]
           gi|355510000|gb|AES91142.1| RING finger protein
           [Medicago truncatula]
          Length = 308

 Score = 92.4 bits (228), Expect = 9e-17
 Identities = 56/89 (62%), Positives = 61/89 (68%), Gaps = 9/89 (10%)
 Frame = -2

Query: 392 DEAGSCSLDERRCYFMGSYQY-VAPDLNLQVALLSQG--------GEKNGNVEGTRIIRN 240
           ++  S SLDERRCY MGSYQY V  D NLQV +LSQ          E++GNVEG RI  N
Sbjct: 222 EDGSSPSLDERRCYSMGSYQYHVLGDSNLQV-VLSQSCCDDDDLRSEESGNVEGKRI-GN 279

Query: 239 TIKGESFSVSKIWLWSNKSKFPSSNVVFP 153
             KGESFSVSKIWLWS K KF SSNV FP
Sbjct: 280 RTKGESFSVSKIWLWSKKRKFTSSNVDFP 308


>ref|XP_003524456.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
           6-diaminopimelate ligase-like [Glycine max]
          Length = 748

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 41/59 (69%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
 Frame = +2

Query: 449 AGEDDLFGDIDKAIALKRKEFVKQGLLDPNPSKHECVFIAA-DELQPDEVTDVEETERL 622
           + EDDLFG+IDKA+ALKRKEFV QGLL PNP K + + +AA DELQPDE+ D+EE ERL
Sbjct: 127 SSEDDLFGEIDKALALKRKEFVSQGLLQPNPPKQDQLPVAAVDELQPDELGDLEEIERL 185


>ref|XP_002521028.1| ring finger protein, putative [Ricinus communis]
           gi|223539865|gb|EEF41445.1| ring finger protein,
           putative [Ricinus communis]
          Length = 374

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 51/101 (50%), Positives = 59/101 (58%), Gaps = 22/101 (21%)
 Frame = -2

Query: 401 VVEDEAGSCSLDERRCYFMGSYQYVAPDLNLQVALL--------------SQGGEKN--- 273
           VVE E  S +LD RRC+ MGSYQYV  DLNLQVAL               S+ G+     
Sbjct: 254 VVEGETSSSNLDARRCFSMGSYQYVVADLNLQVALCPGRNVGTGSFKLVKSKNGQNGNTS 313

Query: 272 ----GNVEGTRI-IRNTIKGESFSVSKIWLWSNKSKFPSSN 165
               G+ EG +I IR+  KGESFSVSKIW WS K K PSS+
Sbjct: 314 SNDIGDAEGKKINIRS--KGESFSVSKIWQWSRKGKLPSSS 352


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