BLASTX nr result

ID: Glycyrrhiza24_contig00017474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017474
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...    97   1e-18
ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g1471...    84   1e-14
gb|ABD28299.1| Cyclin-like F-box [Medicago truncatula]                 84   2e-14
ref|XP_003598640.1| FBD-associated F-box protein [Medicago trunc...    84   2e-14
ref|XP_003610666.1| F-box/LRR-repeat protein [Medicago truncatul...    82   4e-14

>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 54/123 (43%), Positives = 79/123 (64%)
 Frame = -2

Query: 370 GKRKEEPHKKEKANEGEDIISNLPESLISRILSFLPTTEDAVLTSVLSKRWIYRWTTINK 191
           G+ K +  K++K+N+G+D+ISNLP+ +I  +LSFLP T+DAV TSVLSKRWIY WT I K
Sbjct: 10  GRCKHKLSKRQKSNKGQDLISNLPDHIIGCVLSFLP-TKDAVSTSVLSKRWIYLWTFITK 68

Query: 190 LVLDECLFYSRKRRRGTGRNQHFVNFVNRALLLTKGSTMESIHLDINDSEFDESLLNTWL 11
           L  D+  + S        R   FV+FV+R LL      + S  L +++ ++D S +N W+
Sbjct: 69  LDFDDIGYCSSNEI----RKACFVDFVDRVLLRLNSEHIRSFSLKMSE-KYDSSYINKWI 123

Query: 10  SSI 2
           S +
Sbjct: 124 SIV 126


>ref|XP_003545870.1| PREDICTED: F-box/LRR-repeat protein At3g14710-like [Glycine max]
          Length = 453

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/109 (44%), Positives = 69/109 (63%)
 Frame = -2

Query: 328 EGEDIISNLPESLISRILSFLPTTEDAVLTSVLSKRWIYRWTTINKLVLDECLFYSRKRR 149
           EGE IIS L ES++ +ILSFLPTT DAV TSVLSK WI+ W +I  L  ++ L    K+ 
Sbjct: 18  EGEGIISKLHESILGKILSFLPTT-DAVHTSVLSKGWIHVWKSITGLQFNDALHPLGKKM 76

Query: 148 RGTGRNQHFVNFVNRALLLTKGSTMESIHLDINDSEFDESLLNTWLSSI 2
               + +HFV FV + +L    S+++S  L +    +D +L++ W+SSI
Sbjct: 77  ----QKEHFVCFVKKVILHLANSSIQSFSLCLTCYHYDSTLVSAWISSI 121


>gb|ABD28299.1| Cyclin-like F-box [Medicago truncatula]
          Length = 437

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 54/130 (41%), Positives = 78/130 (60%)
 Frame = -2

Query: 403 MESGLTVATGSGKRKEEPHKKEKANEGEDIISNLPESLISRILSFLPTTEDAVLTSVLSK 224
           MESGLT+         + H+K K+   +D+   L ESLI+ I+SFLPT +DAV T VLSK
Sbjct: 1   MESGLTITA-------QKHRKNKSTCEDDLFYKLTESLITHIISFLPT-KDAVRTCVLSK 52

Query: 223 RWIYRWTTINKLVLDECLFYSRKRRRGTGRNQHFVNFVNRALLLTKGSTMESIHLDINDS 44
           +W +RWT + KL L +           +  + +FV+FV RALLLT+    E+I L ++  
Sbjct: 53  QWKHRWTFLTKLSLLD--------HHDSSPSSNFVSFVTRALLLTR---TETISLSLS-G 100

Query: 43  EFDESLLNTW 14
           ++D SLL+ W
Sbjct: 101 QYDLSLLDAW 110


>ref|XP_003598640.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355487688|gb|AES68891.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 450

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 54/130 (41%), Positives = 78/130 (60%)
 Frame = -2

Query: 403 MESGLTVATGSGKRKEEPHKKEKANEGEDIISNLPESLISRILSFLPTTEDAVLTSVLSK 224
           MESGLT+         + H+K K+   +D+   L ESLI+ I+SFLPT +DAV T VLSK
Sbjct: 1   MESGLTITA-------QKHRKNKSTCEDDLFYKLTESLITHIISFLPT-KDAVRTCVLSK 52

Query: 223 RWIYRWTTINKLVLDECLFYSRKRRRGTGRNQHFVNFVNRALLLTKGSTMESIHLDINDS 44
           +W +RWT + KL L +           +  + +FV+FV RALLLT+    E+I L ++  
Sbjct: 53  QWKHRWTFLTKLSLLD--------HHDSSPSSNFVSFVTRALLLTR---TETISLSLS-G 100

Query: 43  EFDESLLNTW 14
           ++D SLL+ W
Sbjct: 101 QYDLSLLDAW 110


>ref|XP_003610666.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355512001|gb|AES93624.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 494

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 62/138 (44%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
 Frame = -2

Query: 403 MESGL--TVATGSGKRKEEPHKKEKANEGEDIISN-LPESLISRILSFLPTTEDAVLTSV 233
           MES L  T  T   K+  +  K   AN  ED ISN LPE +I+ ILSF+PT +DA+ TS+
Sbjct: 1   MESDLPITAFTRPTKKPSKITKIANANAVEDTISNMLPEPVITHILSFVPT-KDAIRTSI 59

Query: 232 LSKRWIYRWTTINKLVL-DECLFYSRKRRRGTGRNQHFVNFVNRALLLTKGSTMESIHLD 56
           LSK+W  RWT+I KL L D  L +    R    R Q+F  FV+RALLL     M+ + L 
Sbjct: 60  LSKKWERRWTSITKLSLHDYQLSFDFTIR--LKRMQNFSTFVDRALLLNDSLAMDHVSLF 117

Query: 55  INDSEFDESLLNTWLSSI 2
           +  + ++ SLL++WLS+I
Sbjct: 118 L-FTLYNWSLLDSWLSNI 134


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