BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017452
         (2143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containi...   577   e-162
ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containi...   554   e-155
ref|XP_003590239.1| Pentatricopeptide repeat-containing protein ...   526   e-147
ref|XP_003590264.1| Pentatricopeptide repeat-containing protein ...   497   e-138
ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ...   465   e-128

>ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
            mitochondrial-like [Glycine max]
          Length = 609

 Score =  577 bits (1486), Expect = e-162
 Identities = 301/448 (67%), Positives = 343/448 (76%), Gaps = 1/448 (0%)
 Frame = +1

Query: 91   MWXXXXXXXXXXXXHGLNVGASRASCVKLMPTTCVAYEVDVPESHQVRCGRFLSTSTFYG 270
            MW             GLN GA+RAS VKL+P T    E  +P+S Q+   RFLS  TF  
Sbjct: 1    MWTLRRASLRLSTSQGLNAGATRASAVKLVPITVEENEAGIPQSRQITHSRFLSADTFCR 60

Query: 271  TGDASLKFTVSRRELSSQADASSTK-DDDGMESGLSELDTDGDDNEYEKDLVDGDEDGGK 447
            TG  SLKF V  RELSSQA ASSTK DDD +E GLSEL+  G ++E + DL D DEDGGK
Sbjct: 61   TGRVSLKFAVGTRELSSQAGASSTKVDDDDLEGGLSELEIQGSNDESDADLSDEDEDGGK 120

Query: 448  PHDELELSDTEIDQTEKKSERRKARSELFFAILKAPGLSVHSALDEWVEKGKELSGKEIS 627
            P DE++LSD   D T+KKS+ R+ +SELF AI  APGLSV SAL++WVE GKELS KEI 
Sbjct: 121  PVDEMDLSDA--DPTKKKSQGRRTQSELFKAIANAPGLSVDSALNKWVEHGKELSRKEIL 178

Query: 628  LAVVNLRRRKMYGKVLQLFEWLEANKKLEFTEKEYASRLDLIAKLAGLPKAEKYIESVPE 807
            LAV  LRRRKMYG+  QLF+WLE+NKKLEF E +YAS+LDLIAKL GLPKAEKYIESVPE
Sbjct: 179  LAVRELRRRKMYGRAFQLFQWLESNKKLEFMESDYASQLDLIAKLRGLPKAEKYIESVPE 238

Query: 808  SFRGELLYRTLLANCASQNNLKKTEAVFNKMKDLNFPVTAFACNQLLVIYKRVDKKKIAD 987
            SFRGELLYRTLLANCASQNNL  TE +FNKMKDL+ P+TAFACNQLL++YK++DKKKIAD
Sbjct: 239  SFRGELLYRTLLANCASQNNLIATEKIFNKMKDLDLPLTAFACNQLLLLYKKLDKKKIAD 298

Query: 988  VLLLMEKENVKPSHFTYKILVDIKGTSNDIDGMEQIVETMKAEGIEPDHQIQAALARYYS 1167
            VLLLMEKENVKPS FTY+IL+D KG SNDI GMEQ+ ETMK EG EPD QIQA LAR+Y+
Sbjct: 299  VLLLMEKENVKPSLFTYRILIDSKGQSNDIAGMEQVFETMKEEGFEPDIQIQALLARHYT 358

Query: 1168 NXXXXXXXXXXXXXXXXXDLKENKWVSPTLLRLYAKLGKADEVERIWKACESKPQIEDCL 1347
            +                 +LKEN+WV  TLLRLYA LGKADEVERIWK CESKP++EDCL
Sbjct: 359  SSGLKEKAEAMLKEMEGENLKENQWVCATLLRLYANLGKADEVERIWKVCESKPRVEDCL 418

Query: 1348 AAVEAWGKLKKIEKAEEVFEMMVNKWKL 1431
            AAVEAWGKL KIE+AE VFEM+  KWKL
Sbjct: 419  AAVEAWGKLNKIEEAEAVFEMVSKKWKL 446



 Score =  213 bits (543), Expect = 1e-52
 Identities = 104/137 (75%), Positives = 123/137 (89%)
 Frame = +3

Query: 1569 MADSGCKIGPLTWDALVTLYVQAGEVEKADSILQKAMLKQNKMKPLFATYMTILEQYAKR 1748
            MADSG +IGPLTWDALV LY+QAGEVEKADSIL KA ++QN+++P+F TY+ ILEQYAKR
Sbjct: 474  MADSGVRIGPLTWDALVKLYIQAGEVEKADSILHKA-IQQNQLQPMFTTYLAILEQYAKR 532

Query: 1749 GDIHNSEKIFHRMRQSGYTSQINMFRALIQAYVNAKVPAYGIRERMKADNLFPNKDLTEK 1928
            GD+HNSEKIF +MRQ+GYTS+I+ F+ LIQAYVNAKVPAYGIRER+KADNLFPNK L  +
Sbjct: 533  GDVHNSEKIFLKMRQAGYTSRISQFQVLIQAYVNAKVPAYGIRERIKADNLFPNKTLANQ 592

Query: 1929 LVLVDAFKKTAVSELLD 1979
            L LVDAF+K AVS+LLD
Sbjct: 593  LALVDAFRKNAVSDLLD 609


>ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
            mitochondrial-like [Glycine max]
          Length = 600

 Score =  554 bits (1427), Expect = e-155
 Identities = 289/447 (64%), Positives = 334/447 (74%)
 Frame = +1

Query: 91   MWXXXXXXXXXXXXHGLNVGASRASCVKLMPTTCVAYEVDVPESHQVRCGRFLSTSTFYG 270
            MW             G+N GASRAS VKL+ TT    E  +P+S Q+  GRFLS     G
Sbjct: 1    MWTLRRASFRLSTRRGVNAGASRASAVKLVATTSEENEAGIPQSRQITYGRFLSA----G 56

Query: 271  TGDASLKFTVSRRELSSQADASSTKDDDGMESGLSELDTDGDDNEYEKDLVDGDEDGGKP 450
             G  SLKF V R ELSSQA ASSTKDDD       +L+  G ++E + DL DGDEDG KP
Sbjct: 57   MGRVSLKFAVGRHELSSQAGASSTKDDD------DDLEIHGSNDESDADLSDGDEDGEKP 110

Query: 451  HDELELSDTEIDQTEKKSERRKARSELFFAILKAPGLSVHSALDEWVEKGKELSGKEISL 630
            HDELELSD EID T+KKS+ R  + +LF  IL APGLSV SAL +W  +GKELS KEI L
Sbjct: 111  HDELELSDAEIDPTKKKSQARWTQLKLFKVILNAPGLSVDSALSKWAGQGKELSRKEIFL 170

Query: 631  AVVNLRRRKMYGKVLQLFEWLEANKKLEFTEKEYASRLDLIAKLAGLPKAEKYIESVPES 810
            AV  LRRRKMYG+  QLF+WLE+NKKLEF E +YAS+LDLIAKL GLP+AEKYIESVPES
Sbjct: 171  AVRELRRRKMYGRAFQLFQWLESNKKLEFMESDYASQLDLIAKLRGLPQAEKYIESVPES 230

Query: 811  FRGELLYRTLLANCASQNNLKKTEAVFNKMKDLNFPVTAFACNQLLVIYKRVDKKKIADV 990
            FRGELLYRTLLANCASQNNL  +E +FNKMKDL+ P+T FACNQLL++YK++DKKKIADV
Sbjct: 231  FRGELLYRTLLANCASQNNLIASEKIFNKMKDLDLPLTVFACNQLLLLYKKLDKKKIADV 290

Query: 991  LLLMEKENVKPSHFTYKILVDIKGTSNDIDGMEQIVETMKAEGIEPDHQIQAALARYYSN 1170
            LLLMEKENVKPS FTY+IL+D KG SNDI GMEQ+ ETMK EG EPD Q+QA LAR+Y++
Sbjct: 291  LLLMEKENVKPSLFTYRILIDSKGHSNDIAGMEQVFETMKEEGFEPDIQLQALLARHYTS 350

Query: 1171 XXXXXXXXXXXXXXXXXDLKENKWVSPTLLRLYAKLGKADEVERIWKACESKPQIEDCLA 1350
                             +L+E +WV  TLLRLYA LGKADEVERIWK CESKP+++DCLA
Sbjct: 351  AGLKEKAEAILKEIEGENLEEKQWVCATLLRLYANLGKADEVERIWKVCESKPRVDDCLA 410

Query: 1351 AVEAWGKLKKIEKAEEVFEMMVNKWKL 1431
            AVEAWGKL+KIE+AE VFEM   KWKL
Sbjct: 411  AVEAWGKLEKIEEAEAVFEMASKKWKL 437



 Score =  209 bits (532), Expect = 2e-51
 Identities = 101/137 (73%), Positives = 123/137 (89%)
 Frame = +3

Query: 1569 MADSGCKIGPLTWDALVTLYVQAGEVEKADSILQKAMLKQNKMKPLFATYMTILEQYAKR 1748
            MADSG +IGPLTW+ALV LY+QAGEVEKADS+LQKA ++Q++++P+F TY+ ILEQYAKR
Sbjct: 465  MADSGLRIGPLTWNALVKLYIQAGEVEKADSVLQKA-IQQSQLQPMFTTYLDILEQYAKR 523

Query: 1749 GDIHNSEKIFHRMRQSGYTSQINMFRALIQAYVNAKVPAYGIRERMKADNLFPNKDLTEK 1928
            GD+HNSEKIF +MRQ+GYTS+I+ F+ L+QAYVNAKVPAYGIRERMKADNLFPNK L  +
Sbjct: 524  GDVHNSEKIFLKMRQAGYTSRISQFKVLMQAYVNAKVPAYGIRERMKADNLFPNKTLANQ 583

Query: 1929 LVLVDAFKKTAVSELLD 1979
            L LVDAF+K  VS+LLD
Sbjct: 584  LFLVDAFRKNPVSDLLD 600


>ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355479287|gb|AES60490.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  526 bits (1356), Expect = e-147
 Identities = 284/437 (64%), Positives = 327/437 (74%), Gaps = 7/437 (1%)
 Frame = +1

Query: 142  NVGASRASCVKLMPTTCV-AYEVDVPESHQVRCGRFLSTSTFYGTGDASLKFTVSRRELS 318
            N G SRA+ VKL+P T   A  V VP+SH     RFLST+    T  AS +FT + RELS
Sbjct: 22   NSGISRAASVKLIPNTSEEAVPVPVPDSH----ARFLSTNLH--TPHASHRFTFTTRELS 75

Query: 319  SQADASSTKDDDGMESGLSELDTDGDDNEYEKDLVDGDEDGGKPH------DELELSDTE 480
            SQADASS K+DD           D DD E E  L + D DG          +ELELSDTE
Sbjct: 76   SQADASSQKEDDA---------DDNDDMEIEDRLTEPDADGDSRDTAEIDINELELSDTE 126

Query: 481  IDQTEKKSERRKARSELFFAILKAPGLSVHSALDEWVEKGKELSGKEISLAVVNLRRRKM 660
             D ++KKS   + RSELF AI+   GLSV SALD+WVEKGKELS +EI LA+ +LRRRKM
Sbjct: 127  TDSSDKKSFSSRRRSELFKAIVSVSGLSVDSALDKWVEKGKELSRQEIGLALNSLRRRKM 186

Query: 661  YGKVLQLFEWLEANKKLEFTEKEYASRLDLIAKLAGLPKAEKYIESVPESFRGELLYRTL 840
            YG+ LQ  +WLE+NKKLEFTEKEYAS+LDLIAKL GLPKAEKY+E VP SFRGELLYRTL
Sbjct: 187  YGRALQALDWLESNKKLEFTEKEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTL 246

Query: 841  LANCASQNNLKKTEAVFNKMKDLNFPVTAFACNQLLVIYKRVDKKKIADVLLLMEKENVK 1020
            LANCAS  NL+KTE  FNKM++L FPVTAFACNQLL+IYK++DKKKIADVLL+MEKENVK
Sbjct: 247  LANCASLENLRKTEETFNKMRELGFPVTAFACNQLLLIYKKIDKKKIADVLLMMEKENVK 306

Query: 1021 PSHFTYKILVDIKGTSNDIDGMEQIVETMKAEGIEPDHQIQAALARYYSNXXXXXXXXXX 1200
            PS +TYKIL+D+KG SNDIDGM QIVETMKAEG E DH  +A+LAR+Y+           
Sbjct: 307  PSSYTYKILIDVKGLSNDIDGMSQIVETMKAEGCELDHLTRASLARHYAAAGLTEKTEAI 366

Query: 1201 XXXXXXXDLKENKWVSPTLLRLYAKLGKADEVERIWKACESKPQIEDCLAAVEAWGKLKK 1380
                   +LKEN WV PTLLRLYA LG+ADEVERIWK CESKP++EDCLAA+EAWG+LKK
Sbjct: 367  LKEIEGENLKENMWVCPTLLRLYAILGRADEVERIWKVCESKPRVEDCLAAIEAWGRLKK 426

Query: 1381 IEKAEEVFEMMVNKWKL 1431
            IE+AE VFEMM NKWKL
Sbjct: 427  IEEAEAVFEMMSNKWKL 443



 Score =  186 bits (473), Expect = 2e-44
 Identities = 90/121 (74%), Positives = 106/121 (87%)
 Frame = +3

Query: 1569 MADSGCKIGPLTWDALVTLYVQAGEVEKADSILQKAMLKQNKMKPLFATYMTILEQYAKR 1748
            M DSGC IGP TWDALV+LYVQAGEVEKAD++LQKA L+QNKMKP+F T+MTI+EQYAKR
Sbjct: 471  MGDSGCTIGPTTWDALVSLYVQAGEVEKADTVLQKA-LQQNKMKPMFTTFMTIMEQYAKR 529

Query: 1749 GDIHNSEKIFHRMRQSGYTSQINMFRALIQAYVNAKVPAYGIRERMKADNLFPNKDLTEK 1928
            GD+HN+EKIF+R+RQ+ Y S+I+ F AL QAY NAK+PAYGIRERMKADNLFPN    +K
Sbjct: 530  GDVHNAEKIFYRLRQANYISRISPFHALAQAYKNAKLPAYGIRERMKADNLFPNNLSIDK 589

Query: 1929 L 1931
            L
Sbjct: 590  L 590


>ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355479312|gb|AES60515.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 557

 Score =  497 bits (1279), Expect = e-138
 Identities = 258/381 (67%), Positives = 295/381 (77%), Gaps = 6/381 (1%)
 Frame = +1

Query: 307  RELSSQADASSTKDDDGMESGLSELDTDGDDNEYEKDLVDGDEDGGKPH------DELEL 468
            RELSSQADASS K+DD           D DD E E  L + D DG          +ELEL
Sbjct: 23   RELSSQADASSQKEDDA---------DDNDDMEIEDRLTEPDADGDSRDTAEIDINELEL 73

Query: 469  SDTEIDQTEKKSERRKARSELFFAILKAPGLSVHSALDEWVEKGKELSGKEISLAVVNLR 648
            SDTE D ++KKS   + RSELF AI+   GLSV SALD+WVEKGKELS +EI LA+ +LR
Sbjct: 74   SDTETDSSDKKSFSSRRRSELFKAIVSVSGLSVDSALDKWVEKGKELSRQEIGLALNSLR 133

Query: 649  RRKMYGKVLQLFEWLEANKKLEFTEKEYASRLDLIAKLAGLPKAEKYIESVPESFRGELL 828
            RRKMYG+ LQ  +WLE+NKKLEFTEKEYAS+LDLIAKL GLPKAEKY+E VP SFRGELL
Sbjct: 134  RRKMYGRALQALDWLESNKKLEFTEKEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELL 193

Query: 829  YRTLLANCASQNNLKKTEAVFNKMKDLNFPVTAFACNQLLVIYKRVDKKKIADVLLLMEK 1008
            YRTLLANCAS  NL+KTE  FNKM++L FPVTAFACNQLL+IYK++DKKKIADVLL+MEK
Sbjct: 194  YRTLLANCASLENLRKTEETFNKMRELGFPVTAFACNQLLLIYKKIDKKKIADVLLMMEK 253

Query: 1009 ENVKPSHFTYKILVDIKGTSNDIDGMEQIVETMKAEGIEPDHQIQAALARYYSNXXXXXX 1188
            ENVKPS +TYKIL+D+KG SNDIDGM QIVETMKAEG E DH  +A+LAR+Y+       
Sbjct: 254  ENVKPSSYTYKILIDVKGLSNDIDGMSQIVETMKAEGCELDHLTRASLARHYAAAGLTEK 313

Query: 1189 XXXXXXXXXXXDLKENKWVSPTLLRLYAKLGKADEVERIWKACESKPQIEDCLAAVEAWG 1368
                       +LKEN WV PTLLRLYA LG+ADEVERIWK CESKP++EDCLAA+EAWG
Sbjct: 314  TEAILKEIEGENLKENMWVCPTLLRLYAILGRADEVERIWKVCESKPRVEDCLAAIEAWG 373

Query: 1369 KLKKIEKAEEVFEMMVNKWKL 1431
            +LKKIE+AE VFEMM NKWKL
Sbjct: 374  RLKKIEEAEAVFEMMSNKWKL 394



 Score =  210 bits (535), Expect = 1e-51
 Identities = 102/137 (74%), Positives = 121/137 (88%)
 Frame = +3

Query: 1569 MADSGCKIGPLTWDALVTLYVQAGEVEKADSILQKAMLKQNKMKPLFATYMTILEQYAKR 1748
            M DSGC IGP TWDALV+LYVQAGEVEKAD++LQKA L+QNKMKP+F T+MTI+EQYAKR
Sbjct: 422  MGDSGCTIGPTTWDALVSLYVQAGEVEKADTVLQKA-LQQNKMKPMFTTFMTIMEQYAKR 480

Query: 1749 GDIHNSEKIFHRMRQSGYTSQINMFRALIQAYVNAKVPAYGIRERMKADNLFPNKDLTEK 1928
            GD+HN+EKIF+R+RQ+ Y S+I+ F AL QAY NAK+PAYGIRERMKADNLFPNK L ++
Sbjct: 481  GDVHNAEKIFYRLRQANYISRISPFHALAQAYKNAKLPAYGIRERMKADNLFPNKALADQ 540

Query: 1929 LVLVDAFKKTAVSELLD 1979
            LV VD F+KT VS+LLD
Sbjct: 541  LVQVDPFRKTPVSDLLD 557


>ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355500005|gb|AES81208.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  465 bits (1197), Expect = e-128
 Identities = 249/443 (56%), Positives = 316/443 (71%), Gaps = 18/443 (4%)
 Frame = +1

Query: 157  RASCVKLMPTTCVAYEVDVPESHQVRCGR--FLSTSTFYGTGDAS----LKFTVSRRELS 318
            R S VKL+P T V  E  V +S ++ C +  F S +  Y +G  S    LKF++ R   S
Sbjct: 19   RVSSVKLLPNTSVEDESGVFDSPKMVCAKCGFSSMNLCYCSGSNSGHGFLKFSLGRLGFS 78

Query: 319  SQADASSTKD-DDGMESGLSELDTDGDDNEYEKDLVDGDEDGGK--------PHDELELS 471
            S+A A +TK+ DD +E G SEL+T   + E EK +V   ED  +        PH+ELEL 
Sbjct: 79   SEAGAKTTKEEDDDLEDGFSELETPLGE-ESEKGVVSDSEDSDESDESEITGPHNELELP 137

Query: 472  ---DTEIDQTEKKSERRKARSELFFAILKAPGLSVHSALDEWVEKGKELSGKEISLAVVN 642
               D +   T K+S R++A SELF AI+   G ++++AL++WVE GKELS +EISL ++N
Sbjct: 138  LSHDVDEVSTGKRSSRKRADSELFKAIMNGTGPTIYTALEKWVEDGKELSREEISLTMIN 197

Query: 643  LRRRKMYGKVLQLFEWLEANKKLEFTEKEYASRLDLIAKLAGLPKAEKYIESVPESFRGE 822
            LRRRK+Y K LQL EWLE+ K LEF E++YAS+LDLIAKL GL KAE YIE +PESFRGE
Sbjct: 198  LRRRKIYLKALQLSEWLESKKHLEFVERDYASQLDLIAKLHGLHKAEVYIEKIPESFRGE 257

Query: 823  LLYRTLLANCASQNNLKKTEAVFNKMKDLNFPVTAFACNQLLVIYKRVDKKKIADVLLLM 1002
            ++YRTLLANC +QNNLKK E +FNKMKDL FP+T FACNQLL++YKR DKKKIADVLLLM
Sbjct: 258  IIYRTLLANCVTQNNLKKAEEIFNKMKDLEFPLTPFACNQLLLLYKRTDKKKIADVLLLM 317

Query: 1003 EKENVKPSHFTYKILVDIKGTSNDIDGMEQIVETMKAEGIEPDHQIQAALARYYSNXXXX 1182
            E+ENVKPS  T+KIL+D+KG SNDIDGM+QIV+ M+AEGIEPD+  +A L  +Y +    
Sbjct: 318  EQENVKPSPLTFKILIDVKGQSNDIDGMDQIVDQMRAEGIEPDNYTKAVLVGHYISGGHD 377

Query: 1183 XXXXXXXXXXXXXDLKENKWVSPTLLRLYAKLGKADEVERIWKACESKPQIEDCLAAVEA 1362
                         +LKEN+WV   LL LYAKLG ADEV R+WK CE++P +EDC+AA+EA
Sbjct: 378  DKAKMLLKEMEGENLKENRWVCRLLLALYAKLGMADEVGRVWKVCETRPSVEDCVAAIEA 437

Query: 1363 WGKLKKIEKAEEVFEMMVNKWKL 1431
            WGKLKKI++AE VFE+M  KWKL
Sbjct: 438  WGKLKKIDEAEAVFEVMARKWKL 460



 Score =  190 bits (482), Expect = 2e-45
 Identities = 90/137 (65%), Positives = 116/137 (84%)
 Frame = +3

Query: 1569 MADSGCKIGPLTWDALVTLYVQAGEVEKADSILQKAMLKQNKMKPLFATYMTILEQYAKR 1748
            MA  GC+IGPLTW+ALV LYVQAGEVEKADS+LQKA ++Q+ ++P+F++Y T+LE+Y+KR
Sbjct: 488  MAHKGCRIGPLTWNALVKLYVQAGEVEKADSVLQKA-IQQSPVRPIFSSYNTLLEEYSKR 546

Query: 1749 GDIHNSEKIFHRMRQSGYTSQINMFRALIQAYVNAKVPAYGIRERMKADNLFPNKDLTEK 1928
            GDIHNSEKIF+RM+Q+GY S++  ++ LI+AY  A VPAYGIR+R+KADN+FPNK L   
Sbjct: 547  GDIHNSEKIFYRMKQAGYISRLKQYQILIEAYRRANVPAYGIRDRLKADNVFPNKTLANL 606

Query: 1929 LVLVDAFKKTAVSELLD 1979
            LV VD FKKT  S+LLD
Sbjct: 607  LVQVDGFKKTQASDLLD 623