BLASTX nr result

ID: Glycyrrhiza24_contig00017426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017426
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   285   5e-75
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   284   2e-74
ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244...   237   2e-60
emb|CBI29343.3| unnamed protein product [Vitis vinifera]              237   2e-60
ref|XP_004171379.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   216   4e-54

>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  285 bits (730), Expect = 5e-75
 Identities = 139/159 (87%), Positives = 150/159 (94%)
 Frame = +3

Query: 3   SPTDVRYDGNQLWVIKIRGSAFLWHQVRCMVAVLFLVGRGLESPDVIDMLLDTSRIPRKP 182
           S TDVRY+ NQLWVIKIRGSAFLWHQVRCMVAVLF+VG+GLESP+VIDMLLDTSRI RKP
Sbjct: 266 SSTDVRYNDNQLWVIKIRGSAFLWHQVRCMVAVLFMVGKGLESPNVIDMLLDTSRILRKP 325

Query: 183 QYTMASEVPLVLQSCEFEDIKFMCSSDAGEALHVRLVNECQIYQLQAAIFHEAILNCVPL 362
           QYTMASEVPLVLQSCEF++IKFMCSSDAGEAL V LVNECQIYQLQAAIFHEA+LNCVPL
Sbjct: 326 QYTMASEVPLVLQSCEFDNIKFMCSSDAGEALRVHLVNECQIYQLQAAIFHEALLNCVPL 385

Query: 363 LHDQSLLPIRGSKKKASHIPLMSRPTEPSYEERRAKLKS 479
            +DQSLLP +GSKKK SH+PLMSRPTEPSYEERRAKL +
Sbjct: 386 SNDQSLLPFQGSKKKVSHVPLMSRPTEPSYEERRAKLNT 424


>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  284 bits (726), Expect = 2e-74
 Identities = 137/159 (86%), Positives = 150/159 (94%)
 Frame = +3

Query: 3   SPTDVRYDGNQLWVIKIRGSAFLWHQVRCMVAVLFLVGRGLESPDVIDMLLDTSRIPRKP 182
           SPTDVRY+ NQLWVIKIRGSAFLWHQVRCMV VLF+VG+GLESP+VIDMLLDT+RI RKP
Sbjct: 266 SPTDVRYNDNQLWVIKIRGSAFLWHQVRCMVVVLFMVGKGLESPNVIDMLLDTARILRKP 325

Query: 183 QYTMASEVPLVLQSCEFEDIKFMCSSDAGEALHVRLVNECQIYQLQAAIFHEAILNCVPL 362
           QYTMASEVPLVLQSCEF++IKFMCSS+AGEALHV LVNECQIYQLQAAIFHEA+LNCVPL
Sbjct: 326 QYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQLQAAIFHEALLNCVPL 385

Query: 363 LHDQSLLPIRGSKKKASHIPLMSRPTEPSYEERRAKLKS 479
            +DQSLL  +GSKKK SH+PLMSRPTEPSYEERRAKL +
Sbjct: 386 SNDQSLLHFQGSKKKVSHVPLMSRPTEPSYEERRAKLNT 424


>ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244254 [Vitis vinifera]
          Length = 1576

 Score =  237 bits (604), Expect = 2e-60
 Identities = 115/164 (70%), Positives = 136/164 (82%), Gaps = 3/164 (1%)
 Frame = +3

Query: 3    SPTDVRYDGNQLWVIKIRGSAFLWHQVRCMVAVLFLVGRGLESPDVIDMLLDTSRIPRKP 182
            +PT+ RYDGNQLW IKI+GSAFLWHQVRCMVAVLF++G+GLESPDV+D LLDT R  RKP
Sbjct: 1413 APTNNRYDGNQLWAIKIKGSAFLWHQVRCMVAVLFMIGQGLESPDVVDALLDTERTSRKP 1472

Query: 183  QYTMASEVPLVLQSCEFEDIKFMCSSDAGEALHVRLVNECQIYQLQAAIFHEAILNCVPL 362
            QY MA E+PLVL+SCEFE +KF+CSSDAG+AL + L NEC+ YQLQAAIFHEA+L+C+P 
Sbjct: 1473 QYAMAPEIPLVLESCEFEGLKFICSSDAGQALRMHLENECRTYQLQAAIFHEALLSCLPS 1532

Query: 363  LHD---QSLLPIRGSKKKASHIPLMSRPTEPSYEERRAKLKSST 485
             +    Q+ L     KK+A+HI LMSRPTEPSYEERRAK  SST
Sbjct: 1533 ANSAEKQNSLNNGTIKKEAAHIDLMSRPTEPSYEERRAKFNSST 1576


>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  237 bits (604), Expect = 2e-60
 Identities = 115/164 (70%), Positives = 136/164 (82%), Gaps = 3/164 (1%)
 Frame = +3

Query: 3   SPTDVRYDGNQLWVIKIRGSAFLWHQVRCMVAVLFLVGRGLESPDVIDMLLDTSRIPRKP 182
           +PT+ RYDGNQLW IKI+GSAFLWHQVRCMVAVLF++G+GLESPDV+D LLDT R  RKP
Sbjct: 303 APTNNRYDGNQLWAIKIKGSAFLWHQVRCMVAVLFMIGQGLESPDVVDALLDTERTSRKP 362

Query: 183 QYTMASEVPLVLQSCEFEDIKFMCSSDAGEALHVRLVNECQIYQLQAAIFHEAILNCVPL 362
           QY MA E+PLVL+SCEFE +KF+CSSDAG+AL + L NEC+ YQLQAAIFHEA+L+C+P 
Sbjct: 363 QYAMAPEIPLVLESCEFEGLKFICSSDAGQALRMHLENECRTYQLQAAIFHEALLSCLPS 422

Query: 363 LHD---QSLLPIRGSKKKASHIPLMSRPTEPSYEERRAKLKSST 485
            +    Q+ L     KK+A+HI LMSRPTEPSYEERRAK  SST
Sbjct: 423 ANSAEKQNSLNNGTIKKEAAHIDLMSRPTEPSYEERRAKFNSST 466


>ref|XP_004171379.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Cucumis
           sativus]
          Length = 198

 Score =  216 bits (550), Expect = 4e-54
 Identities = 109/161 (67%), Positives = 126/161 (78%)
 Frame = +3

Query: 3   SPTDVRYDGNQLWVIKIRGSAFLWHQVRCMVAVLFLVGRGLESPDVIDMLLDTSRIPRKP 182
           SP DVR +GN LW   I GSAFLWHQVRCMVAV+F+VG+ LE PDVID+LLD  R PRKP
Sbjct: 38  SPCDVRTEGNPLWAFNIEGSAFLWHQVRCMVAVVFMVGQDLEDPDVIDILLDPLRTPRKP 97

Query: 183 QYTMASEVPLVLQSCEFEDIKFMCSSDAGEALHVRLVNECQIYQLQAAIFHEAILNCVPL 362
           QY MASE PLVL SCEFE +KF CSSDAGEAL + L NE + Y+LQAAIF EA+L+C+P 
Sbjct: 98  QYVMASENPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTYKLQAAIFKEALLSCLP- 156

Query: 363 LHDQSLLPIRGSKKKASHIPLMSRPTEPSYEERRAKLKSST 485
            +D S    R  KKK SH+ L+SRPTEPSYEERRAKL S++
Sbjct: 157 -NDGSSSDNRKLKKKNSHVALLSRPTEPSYEERRAKLDSTS 196


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