BLASTX nr result

ID: Glycyrrhiza24_contig00017412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017412
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517594.1| PREDICTED: thymocyte nuclear protein 1-like ...   220   4e-55
ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatu...   214   2e-53
ref|XP_002522118.1| conserved hypothetical protein [Ricinus comm...   183   4e-44
ref|XP_002883844.1| hypothetical protein ARALYDRAFT_319455 [Arab...   178   2e-42
ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|2...   177   4e-42

>ref|XP_003517594.1| PREDICTED: thymocyte nuclear protein 1-like [Glycine max]
          Length = 136

 Score =  220 bits (560), Expect = 4e-55
 Identities = 106/129 (82%), Positives = 112/129 (86%)
 Frame = -2

Query: 455 MGKEKKRFLLKTEPSEWSWEDQAANGGMSKWDGVKNKQAQKYLKSMSLNDLCFFYHSGPK 276
           MGKEKKR+LLKTEPSEWSWEDQAANGG+SKWDGVKNKQAQKYLKSMS+NDLCFFYHSGPK
Sbjct: 1   MGKEKKRYLLKTEPSEWSWEDQAANGGISKWDGVKNKQAQKYLKSMSINDLCFFYHSGPK 60

Query: 275 AXXXXXXXXXXREWYADDGGAVDVKAVGEMRRPVDLKEMKNLKDFAMLKQPRLSVVPVPD 96
           A          REWY D   AVDVKAVGEMRRPVDLKEMK+ KDFA+L+QPRLSVVPVPD
Sbjct: 61  ARRIVGVVSVVREWYGD---AVDVKAVGEMRRPVDLKEMKHFKDFALLRQPRLSVVPVPD 117

Query: 95  HIWNTICDL 69
           HIWN IC L
Sbjct: 118 HIWNQICHL 126


>ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatula]
           gi|355511977|gb|AES93600.1| Thymocyte nuclear protein
           [Medicago truncatula]
          Length = 146

 Score =  214 bits (546), Expect = 2e-53
 Identities = 105/131 (80%), Positives = 111/131 (84%), Gaps = 2/131 (1%)
 Frame = -2

Query: 455 MGKEKKRFLLKTEPSEWSWEDQAANGGMSKWDGVKNKQAQKYLKSMSLNDLCFFYHSGPK 276
           MGKE KRFLLKTEPSEWSWEDQ ANGG+SKWDGVKNKQAQKYLKSMSLNDLCFFYHSGPK
Sbjct: 1   MGKEVKRFLLKTEPSEWSWEDQEANGGISKWDGVKNKQAQKYLKSMSLNDLCFFYHSGPK 60

Query: 275 AXXXXXXXXXXREWYA--DDGGAVDVKAVGEMRRPVDLKEMKNLKDFAMLKQPRLSVVPV 102
           +          +EWY   DD GAVDVKAVGEMRR VDLKEMK+LKDF +LKQPRLSVVPV
Sbjct: 61  SRRIVGVVSVVKEWYTDNDDDGAVDVKAVGEMRRVVDLKEMKHLKDFVLLKQPRLSVVPV 120

Query: 101 PDHIWNTICDL 69
           P  IW+TICDL
Sbjct: 121 PHVIWDTICDL 131


>ref|XP_002522118.1| conserved hypothetical protein [Ricinus communis]
           gi|223538717|gb|EEF40318.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 150

 Score =  183 bits (465), Expect = 4e-44
 Identities = 88/134 (65%), Positives = 104/134 (77%), Gaps = 5/134 (3%)
 Frame = -2

Query: 455 MGKEKKRFLLKTEPSEWSWEDQAANGGMSKWDGVKNKQAQKYLKSMSLNDLCFFYHSGPK 276
           MGKEK+ +LLKTEP EWSW+DQA+NGG++ WDGVKNKQAQK LK+M++ DLCFFYHSG K
Sbjct: 1   MGKEKQYWLLKTEPGEWSWDDQASNGGITNWDGVKNKQAQKNLKAMNIKDLCFFYHSGAK 60

Query: 275 AXXXXXXXXXXREWYA--DDGGAVDVKAVGEMRRPVDLKEMKN---LKDFAMLKQPRLSV 111
           A          +EWY+  DD   VDVKAVGEMRRPVDLKEMKN   L DFA+ +QPRLSV
Sbjct: 61  ARRVVGVVAVVKEWYSNDDDEVVVDVKAVGEMRRPVDLKEMKNDDGLSDFALFRQPRLSV 120

Query: 110 VPVPDHIWNTICDL 69
           VPVP  +W  +C+L
Sbjct: 121 VPVPKEVWERVCEL 134


>ref|XP_002883844.1| hypothetical protein ARALYDRAFT_319455 [Arabidopsis lyrata subsp.
           lyrata] gi|297329684|gb|EFH60103.1| hypothetical protein
           ARALYDRAFT_319455 [Arabidopsis lyrata subsp. lyrata]
          Length = 155

 Score =  178 bits (451), Expect = 2e-42
 Identities = 89/136 (65%), Positives = 101/136 (74%), Gaps = 7/136 (5%)
 Frame = -2

Query: 455 MGKEKKRFLLKTEPSEWSWEDQAANGGMSKWDGVKNKQAQKYLKSMSLNDLCFFYHSGPK 276
           MGK K+ +LLKTEPSEWSW DQ ANGG+SKWDGVKNKQAQK LKSM+L DLCFFYHSG K
Sbjct: 1   MGKTKQYWLLKTEPSEWSWSDQEANGGISKWDGVKNKQAQKNLKSMTLGDLCFFYHSGTK 60

Query: 275 AXXXXXXXXXXREWYADDG---GAVDVKAVGEMRRPVDLKEMKN----LKDFAMLKQPRL 117
           A          REWY DD    GAVDVKA+GEMR+ VDLKEMK     +K F + +QPRL
Sbjct: 61  ARCVVGVVEVSREWYTDDDEGEGAVDVKAIGEMRKCVDLKEMKGDKGIIKSFVLFRQPRL 120

Query: 116 SVVPVPDHIWNTICDL 69
           SVVPV + +W  IC+L
Sbjct: 121 SVVPVEEDVWKKICEL 136


>ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|222850329|gb|EEE87876.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  177 bits (448), Expect = 4e-42
 Identities = 86/133 (64%), Positives = 100/133 (75%), Gaps = 4/133 (3%)
 Frame = -2

Query: 455 MGKEKKRFLLKTEPSEWSWEDQAANGGMSKWDGVKNKQAQKYLKSMSLNDLCFFYHSGPK 276
           MGKEK+ +LLKTEP EWSW+DQA+NGG+S WDGVKNKQAQK LK+M LNDLCFFYHSG  
Sbjct: 1   MGKEKRYWLLKTEPGEWSWDDQASNGGISNWDGVKNKQAQKNLKAMKLNDLCFFYHSGSN 60

Query: 275 AXXXXXXXXXXREWYADDG-GAVDVKAVGEMRRPVDLKEMK---NLKDFAMLKQPRLSVV 108
           A          REWY + G G VDVKAVGEMRRP+DLKE+K    LK F + +QPRLSVV
Sbjct: 61  ARRVVGVVTVVREWYDEGGEGVVDVKAVGEMRRPLDLKELKGDEGLKGFQLFRQPRLSVV 120

Query: 107 PVPDHIWNTICDL 69
           PV   +W  +C+L
Sbjct: 121 PVSKEVWERVCEL 133


Top