BLASTX nr result

ID: Glycyrrhiza24_contig00017408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017408
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540543.1| PREDICTED: 60S ribosomal protein L3-like [Gl...   238   4e-61
emb|CBI18223.3| unnamed protein product [Vitis vinifera]              237   6e-61
ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vi...   237   6e-61
gb|ACU20789.1| unknown [Glycine max]                                  236   1e-60
ref|XP_003534345.1| PREDICTED: 60S ribosomal protein L3-like [Gl...   236   2e-60

>ref|XP_003540543.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  238 bits (607), Expect = 4e-61
 Identities = 116/149 (77%), Positives = 119/149 (79%)
 Frame = +3

Query: 45  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTHIVREV 224
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PCRLTAFVGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCRLTAFVGYKAGMTHIVREV 60

Query: 225 EKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRTLNTVWAQHLSEEVKRRFYK 404
           EKPGSKLHKKETCEAVTIIETPPL         KTPRGLRTLNT+WAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHLSEEVKRRFYK 120

Query: 405 NWCXXXXXXXXXXXXXXXXXXXXXDIESQ 491
           NWC                     DIESQ
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQ 149


>emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  237 bits (605), Expect = 6e-61
 Identities = 110/128 (85%), Positives = 117/128 (91%)
 Frame = +3

Query: 30  LK*EKMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTH 209
           L+  +MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPCRLTAF+GYKAGMTH
Sbjct: 56  LRRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH 115

Query: 210 IVREVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRTLNTVWAQHLSEEVK 389
           IVREVEKPGSKLHKKETCEAVTI+ETPP+         KTPRGLR+LNTVWAQHLSEEVK
Sbjct: 116 IVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVK 175

Query: 390 RRFYKNWC 413
           RRFYKNWC
Sbjct: 176 RRFYKNWC 183


>ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
          Length = 397

 Score =  237 bits (605), Expect = 6e-61
 Identities = 110/128 (85%), Positives = 117/128 (91%)
 Frame = +3

Query: 30  LK*EKMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTH 209
           L+  +MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPCRLTAF+GYKAGMTH
Sbjct: 4   LRRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH 63

Query: 210 IVREVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRTLNTVWAQHLSEEVK 389
           IVREVEKPGSKLHKKETCEAVTI+ETPP+         KTPRGLR+LNTVWAQHLSEEVK
Sbjct: 64  IVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVK 123

Query: 390 RRFYKNWC 413
           RRFYKNWC
Sbjct: 124 RRFYKNWC 131


>gb|ACU20789.1| unknown [Glycine max]
          Length = 323

 Score =  236 bits (603), Expect = 1e-60
 Identities = 115/149 (77%), Positives = 118/149 (79%)
 Frame = +3

Query: 45  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTHIVREV 224
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PCRLT FVGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCRLTTFVGYKAGMTHIVREV 60

Query: 225 EKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRTLNTVWAQHLSEEVKRRFYK 404
           EKPGSKLHKKETCEAVTIIETPPL         KTPRGLRTLNT+WAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHLSEEVKRRFYK 120

Query: 405 NWCXXXXXXXXXXXXXXXXXXXXXDIESQ 491
           NWC                     DIESQ
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQ 149


>ref|XP_003534345.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  236 bits (601), Expect = 2e-60
 Identities = 116/149 (77%), Positives = 118/149 (79%)
 Frame = +3

Query: 45  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTHIVREV 224
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PC LTAFVGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCGLTAFVGYKAGMTHIVREV 60

Query: 225 EKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRTLNTVWAQHLSEEVKRRFYK 404
           EKPGSKLHKKETCEAVTIIETPPL         KTPRGLRTLNTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYK 120

Query: 405 NWCXXXXXXXXXXXXXXXXXXXXXDIESQ 491
           NWC                     DIESQ
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQ 149


Top