BLASTX nr result

ID: Glycyrrhiza24_contig00017401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017401
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycin...   166   3e-39
ref|XP_003592709.1| 50S ribosomal protein L18 [Medicago truncatu...   164   1e-38
ref|XP_003544108.1| PREDICTED: 50S ribosomal protein L18-like [G...   162   4e-38
gb|AFK37558.1| unknown [Lotus japonicus]                              159   3e-37
ref|XP_004144339.1| PREDICTED: 50S ribosomal protein L18-like [C...   154   2e-35

>ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycine max]
           gi|255631236|gb|ACU15985.1| unknown [Glycine max]
          Length = 114

 Score =  166 bits (421), Expect = 3e-39
 Identities = 94/131 (71%), Positives = 98/131 (74%)
 Frame = +1

Query: 67  PPTVRQSTPPRLYCKTDMXXXXXXXXXXXTQFLKPYVLKMHFTNKYVSAQVIHXXXXXXX 246
           PP VR   PPR+                 TQFLKPYVLKMHFTNKYVSAQVIH       
Sbjct: 4   PPPVR---PPRI-----------------TQFLKPYVLKMHFTNKYVSAQVIHTPTATVV 43

Query: 247 XXXXXQEKALRSSLETTRDVAAAAKIGKLLAERLLLKDIPAVSVHLKREQKYHGKVKAVI 426
                QEKALRSSLET+RDVAAAAKIGK+LAERLLLKDIPAVSVHLKREQKYHGKVKAVI
Sbjct: 44  SSASSQEKALRSSLETSRDVAAAAKIGKILAERLLLKDIPAVSVHLKREQKYHGKVKAVI 103

Query: 427 DSLREAGVKLL 459
           DS+REAGVKLL
Sbjct: 104 DSIREAGVKLL 114


>ref|XP_003592709.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355481757|gb|AES62960.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 114

 Score =  164 bits (416), Expect = 1e-38
 Identities = 94/131 (71%), Positives = 97/131 (74%)
 Frame = +1

Query: 67  PPTVRQSTPPRLYCKTDMXXXXXXXXXXXTQFLKPYVLKMHFTNKYVSAQVIHXXXXXXX 246
           PP VR   PPRL                 TQ+LKPYVLKMHFTNKYVSAQVIH       
Sbjct: 4   PPPVR---PPRL-----------------TQYLKPYVLKMHFTNKYVSAQVIHTPTATVA 43

Query: 247 XXXXXQEKALRSSLETTRDVAAAAKIGKLLAERLLLKDIPAVSVHLKREQKYHGKVKAVI 426
                QEKALRSSLETTRDVAAAAKIGKLLAERL LKDIPAVSVHLKREQ+YHGKVKAVI
Sbjct: 44  SSASSQEKALRSSLETTRDVAAAAKIGKLLAERLSLKDIPAVSVHLKREQRYHGKVKAVI 103

Query: 427 DSLREAGVKLL 459
           DSLREAGV+LL
Sbjct: 104 DSLREAGVRLL 114


>ref|XP_003544108.1| PREDICTED: 50S ribosomal protein L18-like [Glycine max]
          Length = 114

 Score =  162 bits (411), Expect = 4e-38
 Identities = 93/131 (70%), Positives = 98/131 (74%)
 Frame = +1

Query: 67  PPTVRQSTPPRLYCKTDMXXXXXXXXXXXTQFLKPYVLKMHFTNKYVSAQVIHXXXXXXX 246
           PP VR   PPR+                 TQFLKPYVLKM+FTNKYVSAQVIH       
Sbjct: 4   PPPVR---PPRI-----------------TQFLKPYVLKMNFTNKYVSAQVIHSPTATVA 43

Query: 247 XXXXXQEKALRSSLETTRDVAAAAKIGKLLAERLLLKDIPAVSVHLKREQKYHGKVKAVI 426
                QEKALRSSLET+RDVAAAAKIGK+LAERLLLK+IPAVSVHLKREQKYHGKVKAVI
Sbjct: 44  SSASSQEKALRSSLETSRDVAAAAKIGKILAERLLLKNIPAVSVHLKREQKYHGKVKAVI 103

Query: 427 DSLREAGVKLL 459
           DSLREAGVKLL
Sbjct: 104 DSLREAGVKLL 114


>gb|AFK37558.1| unknown [Lotus japonicus]
          Length = 114

 Score =  159 bits (403), Expect = 3e-37
 Identities = 84/100 (84%), Positives = 87/100 (87%)
 Frame = +1

Query: 160 FLKPYVLKMHFTNKYVSAQVIHXXXXXXXXXXXXQEKALRSSLETTRDVAAAAKIGKLLA 339
           FLKPYVL+MHFTNKYVSAQVIH            QEKALRSSLET RDVAAAAKIGK+LA
Sbjct: 15  FLKPYVLRMHFTNKYVSAQVIHTPTATVASSASSQEKALRSSLETKRDVAAAAKIGKILA 74

Query: 340 ERLLLKDIPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL 459
           ERLLLK+IPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL
Sbjct: 75  ERLLLKEIPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL 114


>ref|XP_004144339.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
           gi|449480883|ref|XP_004156021.1| PREDICTED: 50S
           ribosomal protein L18-like [Cucumis sativus]
          Length = 114

 Score =  154 bits (388), Expect = 2e-35
 Identities = 79/102 (77%), Positives = 87/102 (85%)
 Frame = +1

Query: 154 TQFLKPYVLKMHFTNKYVSAQVIHXXXXXXXXXXXXQEKALRSSLETTRDVAAAAKIGKL 333
           TQ+LKPYVLKMHFTNK+VSAQVIH            QEKAL+SS+E+TRDVAAAAKIGKL
Sbjct: 13  TQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKL 72

Query: 334 LAERLLLKDIPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL 459
           L ERLLLK IPAV VHLKREQ+YHGKVKAVIDS+REAG+KLL
Sbjct: 73  LGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIKLL 114


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