BLASTX nr result

ID: Glycyrrhiza24_contig00017387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017387
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235495.1| uncharacterized protein LOC100500261 [Glycin...    93   2e-17
ref|XP_003528843.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    90   2e-16
ref|XP_003622508.1| RING-H2 finger protein ATL2C [Medicago trunc...    81   8e-14
ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    70   2e-10

>ref|NP_001235495.1| uncharacterized protein LOC100500261 [Glycine max]
           gi|255629865|gb|ACU15283.1| unknown [Glycine max]
          Length = 170

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/109 (52%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
 Frame = -1

Query: 320 MGFPVGYAEVXXXXXXXXXXXXXXXXXXXXXXXXXXLGLSDFLETDVAWP---HPNNAAA 150
           MGFPVGYAEV                          LG SDFLET+VAWP   HP++ AA
Sbjct: 1   MGFPVGYAEVFFPNPFLHTLALLGLLRNLVFFLLHLLGFSDFLETEVAWPDHPHPSDEAA 60

Query: 149 ARTPDPSASALLIRELLPASRFGDIAGGADYDSSSCCCAVCLFEFSEEE 3
           A  P PSASALLIR+LLP ++FGD   GA  +     CAVCLFEFSEEE
Sbjct: 61  AARP-PSASALLIRDLLPVAKFGDSDVGAQQNG---LCAVCLFEFSEEE 105


>ref|XP_003528843.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Glycine max]
          Length = 169

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/106 (48%), Positives = 57/106 (53%)
 Frame = -1

Query: 320 MGFPVGYAEVXXXXXXXXXXXXXXXXXXXXXXXXXXLGLSDFLETDVAWPHPNNAAAART 141
           MGFPVGY EV                          LGLSDF ET+VAWP P  +  A  
Sbjct: 1   MGFPVGYVEVFFPNPFLHTLALLGLLRNLVFFLFHLLGLSDFFETEVAWPDPRPSDTAEA 60

Query: 140 PDPSASALLIRELLPASRFGDIAGGADYDSSSCCCAVCLFEFSEEE 3
             PS SALLIR+LLP ++FGD    A    + C CAVCLFEFSEEE
Sbjct: 61  RPPSVSALLIRDLLPVAKFGDSDIAA--RQNGCACAVCLFEFSEEE 104


>ref|XP_003622508.1| RING-H2 finger protein ATL2C [Medicago truncatula]
           gi|355497523|gb|AES78726.1| RING-H2 finger protein ATL2C
           [Medicago truncatula]
          Length = 381

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 50/110 (45%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
 Frame = -1

Query: 320 MGFPVGYAEVXXXXXXXXXXXXXXXXXXXXXXXXXXLGLSDFLETDVAWPHPNNAAAART 141
           MGFPVGYAEV                          LGLSDFLET+    H     A  T
Sbjct: 1   MGFPVGYAEVFFPNLFLHTLTLLGLLRSFVFLLFHFLGLSDFLETNT---HHTGEEATST 57

Query: 140 PDP----SASALLIRELLPASRFGDIAGGADYDSSSCCCAVCLFEFSEEE 3
           P+P    S SALLIRE LPA+++G++    +     CCCAVCLFEFSEEE
Sbjct: 58  PEPCKNPSVSALLIREFLPATKYGELTDTEE----GCCCAVCLFEFSEEE 103


>ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|222861586|gb|EEE99128.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 45/112 (40%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
 Frame = -1

Query: 320 MGFPVGYAEVXXXXXXXXXXXXXXXXXXXXXXXXXXLGLSDFLETDVAWP-HPNNAAAAR 144
           MGFPVGY+EV                          +GLSDFLETD  WP +P   +   
Sbjct: 1   MGFPVGYSEVLLPKLFVHALSLLGFIRGLVLCLFTYVGLSDFLETDNIWPDYPTRTSFY- 59

Query: 143 TPDPSASALLIRELLPASRFGDIAGGADYDSSSCC-----CAVCLFEFSEEE 3
              PS SA LIRE+LP  +F D+ GG       CC     CAVCL+EF  E+
Sbjct: 60  ---PSLSAALIREILPVIKFEDLLGG----DGGCCDLPESCAVCLYEFEGED 104


>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/107 (41%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
 Frame = -1

Query: 320 MGFPVGYAEVXXXXXXXXXXXXXXXXXXXXXXXXXXLGLSDFLETDVAWPHPNNAAAART 141
           MGFPVGY EV                          LGLSDFLETDV+W    +   A+ 
Sbjct: 1   MGFPVGYTEVFLPKLFLHTLSFLGFIRKLIFSLFHFLGLSDFLETDVSW----SETQAQV 56

Query: 140 PD-PSASALLIRELLPASRFGDIAGGADYDSSSCCCAVCLFEFSEEE 3
           P+ P  SA+LIRE+LP  +FG+   G D   S   CAVCL++F   E
Sbjct: 57  PEYPPVSAVLIREILPVMKFGEAVCGGDAPES---CAVCLYDFEVGE 100