BLASTX nr result

ID: Glycyrrhiza24_contig00017379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017379
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536284.1| PREDICTED: 60S ribosomal protein L6, mitocho...   189   5e-46
gb|AFK46285.1| unknown [Medicago truncatula]                          188   9e-46
ref|XP_004143514.1| PREDICTED: 60S ribosomal protein L6, mitocho...   187   1e-45
ref|NP_001235881.1| uncharacterized protein LOC100527168 [Glycin...   187   2e-45
ref|NP_001239835.1| uncharacterized protein LOC100811303 [Glycin...   187   2e-45

>ref|XP_003536284.1| PREDICTED: 60S ribosomal protein L6, mitochondrial-like [Glycine
           max]
          Length = 102

 Score =  189 bits (479), Expect = 5e-46
 Identities = 90/93 (96%), Positives = 93/93 (100%)
 Frame = +3

Query: 123 MEAKFFRFLKIVGVGYKARAESAGRLLYLKLGYSHEVELSVPPAVRVFCFKNNVICCTGI 302
           MEAKFFRFLKIVGVGYKARAE+AGRLLYLKLGYSHEVEL+VPPAVRVFCFKNNVICCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGI 60

Query: 303 DKQRVHQFAATVRSCKPPEVYKGKGIMYVDEVI 401
           DKQRVHQFAATVR+CKPPEVYKGKGIMYVDEVI
Sbjct: 61  DKQRVHQFAATVRTCKPPEVYKGKGIMYVDEVI 93


>gb|AFK46285.1| unknown [Medicago truncatula]
          Length = 102

 Score =  188 bits (477), Expect = 9e-46
 Identities = 90/93 (96%), Positives = 91/93 (97%)
 Frame = +3

Query: 123 MEAKFFRFLKIVGVGYKARAESAGRLLYLKLGYSHEVELSVPPAVRVFCFKNNVICCTGI 302
           MEAKFFRFLKIVGVGYKARAESAGRLLYLKLGYSHEVELS PPAVRVFCFKNNVICCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAESAGRLLYLKLGYSHEVELSAPPAVRVFCFKNNVICCTGI 60

Query: 303 DKQRVHQFAATVRSCKPPEVYKGKGIMYVDEVI 401
           DKQRVHQFAATVR+CKPPEVYKGKGIMY DEVI
Sbjct: 61  DKQRVHQFAATVRNCKPPEVYKGKGIMYTDEVI 93


>ref|XP_004143514.1| PREDICTED: 60S ribosomal protein L6, mitochondrial-like [Cucumis
           sativus] gi|449496483|ref|XP_004160146.1| PREDICTED: 60S
           ribosomal protein L6, mitochondrial-like [Cucumis
           sativus]
          Length = 102

 Score =  187 bits (476), Expect = 1e-45
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +3

Query: 123 MEAKFFRFLKIVGVGYKARAESAGRLLYLKLGYSHEVELSVPPAVRVFCFKNNVICCTGI 302
           MEAKFFRFLKIVGVGYKARAE+AGRLLYLKLGYSHEVEL+VPPAVRVFCFKNNV+CCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVVCCTGI 60

Query: 303 DKQRVHQFAATVRSCKPPEVYKGKGIMYVDEVI 401
           DKQRVHQFAA VRSCKPPEVYKGKGIMYVDEVI
Sbjct: 61  DKQRVHQFAAAVRSCKPPEVYKGKGIMYVDEVI 93


>ref|NP_001235881.1| uncharacterized protein LOC100527168 [Glycine max]
           gi|255631702|gb|ACU16218.1| unknown [Glycine max]
          Length = 102

 Score =  187 bits (475), Expect = 2e-45
 Identities = 89/93 (95%), Positives = 92/93 (98%)
 Frame = +3

Query: 123 MEAKFFRFLKIVGVGYKARAESAGRLLYLKLGYSHEVELSVPPAVRVFCFKNNVICCTGI 302
           MEAKFFRFLKIVGVGYKARAE+AGRLLYLKLGYSHEVEL+VPPAVRVFCFKNNVICCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVICCTGI 60

Query: 303 DKQRVHQFAATVRSCKPPEVYKGKGIMYVDEVI 401
           DKQRVHQFAAT R+CKPPEVYKGKGIMYVDEVI
Sbjct: 61  DKQRVHQFAATARTCKPPEVYKGKGIMYVDEVI 93


>ref|NP_001239835.1| uncharacterized protein LOC100811303 [Glycine max]
           gi|255634114|gb|ACU17420.1| unknown [Glycine max]
          Length = 102

 Score =  187 bits (474), Expect = 2e-45
 Identities = 88/93 (94%), Positives = 93/93 (100%)
 Frame = +3

Query: 123 MEAKFFRFLKIVGVGYKARAESAGRLLYLKLGYSHEVELSVPPAVRVFCFKNNVICCTGI 302
           MEAKFFRFLKIVGVGYKARAE+AGRLLYLKLGYSH+VEL+VPPAVRVFCFKNNVICCTGI
Sbjct: 1   MEAKFFRFLKIVGVGYKARAEAAGRLLYLKLGYSHDVELAVPPAVRVFCFKNNVICCTGI 60

Query: 303 DKQRVHQFAATVRSCKPPEVYKGKGIMYVDEVI 401
           DKQRVHQFAATVR+CKPPEVYKGKG+MYVDEVI
Sbjct: 61  DKQRVHQFAATVRTCKPPEVYKGKGLMYVDEVI 93


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