BLASTX nr result

ID: Glycyrrhiza24_contig00017342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017342
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43440.1| unknown [Medicago truncatula]                          171   6e-41
ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis p...   166   1e-39
ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis p...   166   1e-39
ref|XP_003549654.1| PREDICTED: 60S ribosome subunit biogenesis p...   165   3e-39
ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis p...   165   4e-39

>gb|AFK43440.1| unknown [Medicago truncatula]
          Length = 187

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/98 (84%), Positives = 87/98 (88%)
 Frame = -2

Query: 294 GNFHLTVQXXXXXXXXAKHKVWLKPQSEMSFLYGNHVLKSALGRITENMAPGDGVVVFSM 115
           GNFHLTVQ        AKHKVWLKPQSEMSFLYGNHVLKSALGRITEN+  GDGVVVFSM
Sbjct: 85  GNFHLTVQALNLLAANAKHKVWLKPQSEMSFLYGNHVLKSALGRITENIVSGDGVVVFSM 144

Query: 114 ADVPLGFGIAAKSTQDCRKMDPNGIVVLHQADIGEYLR 1
           +DVPLGFG+AAKSTQDCRK+DPNGIVVLHQ DIGEYLR
Sbjct: 145 SDVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDIGEYLR 182


>ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/98 (81%), Positives = 86/98 (87%)
 Frame = -2

Query: 294 GNFHLTVQXXXXXXXXAKHKVWLKPQSEMSFLYGNHVLKSALGRITENMAPGDGVVVFSM 115
           G+FHLTVQ        AKHKVWLKP SEMSFLYGNHVLK  LGRITEN+ PGDGVVV+SM
Sbjct: 85  GSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNHVLKGGLGRITENIVPGDGVVVYSM 144

Query: 114 ADVPLGFGIAAKSTQDCRKMDPNGIVVLHQADIGEYLR 1
           +DVPLGFGIAAKSTQDCRK+DPNGIVVLHQ+DIGEYLR
Sbjct: 145 SDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEYLR 182


>ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/98 (81%), Positives = 86/98 (87%)
 Frame = -2

Query: 294 GNFHLTVQXXXXXXXXAKHKVWLKPQSEMSFLYGNHVLKSALGRITENMAPGDGVVVFSM 115
           G+FHLTVQ        AKHKVWLKP SEMSFLYGNHVLK  LGRITEN+ PGDGVVV+SM
Sbjct: 85  GSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNHVLKGGLGRITENIVPGDGVVVYSM 144

Query: 114 ADVPLGFGIAAKSTQDCRKMDPNGIVVLHQADIGEYLR 1
           +DVPLGFGIAAKSTQDCRK+DPNGIVVLHQ+DIGEYLR
Sbjct: 145 SDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEYLR 182


>ref|XP_003549654.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Glycine max]
          Length = 187

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/98 (80%), Positives = 87/98 (88%)
 Frame = -2

Query: 294 GNFHLTVQXXXXXXXXAKHKVWLKPQSEMSFLYGNHVLKSALGRITENMAPGDGVVVFSM 115
           G+FHLTVQ        AKHKVWLKPQSEMSFLYGNHVLK ALG+++EN+A GDGVVVFSM
Sbjct: 85  GSFHLTVQALNLLAANAKHKVWLKPQSEMSFLYGNHVLKGALGKLSENIAAGDGVVVFSM 144

Query: 114 ADVPLGFGIAAKSTQDCRKMDPNGIVVLHQADIGEYLR 1
           ADVPLGFG+AAKST DCRK+DPNGIVVLHQAD+GEYLR
Sbjct: 145 ADVPLGFGVAAKSTLDCRKLDPNGIVVLHQADVGEYLR 182


>ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera] gi|147783622|emb|CAN68143.1|
           hypothetical protein VITISV_035660 [Vitis vinifera]
          Length = 187

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/98 (81%), Positives = 84/98 (85%)
 Frame = -2

Query: 294 GNFHLTVQXXXXXXXXAKHKVWLKPQSEMSFLYGNHVLKSALGRITENMAPGDGVVVFSM 115
           G FHLTVQ        AKHKVWLKP SEMSFLYGNHVLK  LGRITEN+  GDG+VVFSM
Sbjct: 85  GKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNHVLKGGLGRITENIVAGDGIVVFSM 144

Query: 114 ADVPLGFGIAAKSTQDCRKMDPNGIVVLHQADIGEYLR 1
           +DVPLGFGIAAKSTQDCRK+DPNGIVVLHQADIGEYLR
Sbjct: 145 SDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEYLR 182


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