BLASTX nr result

ID: Glycyrrhiza24_contig00017340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017340
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547018.1| PREDICTED: inactive rhomboid protein 1-like ...    97   1e-18
ref|XP_003542031.1| PREDICTED: inactive rhomboid protein 1-like ...    97   1e-18
ref|XP_004145294.1| PREDICTED: inactive rhomboid protein 1-like ...    94   1e-17
ref|XP_003597357.1| Rhomboid family protein AtRBL1 [Medicago tru...    93   3e-17
ref|XP_002313433.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17

>ref|XP_003547018.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 389

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 56/90 (62%), Positives = 56/90 (62%)
 Frame = -3

Query: 270 RLEQEFGFVRIGCLYVISGFGGSLLSALFIQSGISVXXXXXXXXXXXXXXSELLINWTIY 91
           RLEQEFGFVRIG LYVISGFGGSLLSALFIQ GISV              SELLINWTIY
Sbjct: 155 RLEQEFGFVRIGFLYVISGFGGSLLSALFIQEGISVGASGALFGLLGGMLSELLINWTIY 214

Query: 90  ANKFXXXXXXXXXXXXXXXXXXLPHVDNFA 1
           ANKF                  LPHVDNFA
Sbjct: 215 ANKFAALLTLIVIVVINLAVGILPHVDNFA 244


>ref|XP_003542031.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 392

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 56/90 (62%), Positives = 56/90 (62%)
 Frame = -3

Query: 270 RLEQEFGFVRIGCLYVISGFGGSLLSALFIQSGISVXXXXXXXXXXXXXXSELLINWTIY 91
           RLEQEFGFVRIG LYVISGFGGSLLSALFIQ GISV              SELLINWTIY
Sbjct: 158 RLEQEFGFVRIGFLYVISGFGGSLLSALFIQEGISVGASGALFGLLGGMLSELLINWTIY 217

Query: 90  ANKFXXXXXXXXXXXXXXXXXXLPHVDNFA 1
           ANKF                  LPHVDNFA
Sbjct: 218 ANKFAALLTLIVIVVINLAIGVLPHVDNFA 247


>ref|XP_004145294.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
           gi|449473549|ref|XP_004153913.1| PREDICTED: inactive
           rhomboid protein 1-like [Cucumis sativus]
           gi|449508492|ref|XP_004163327.1| PREDICTED: inactive
           rhomboid protein 1-like [Cucumis sativus]
          Length = 383

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/90 (57%), Positives = 55/90 (61%)
 Frame = -3

Query: 270 RLEQEFGFVRIGCLYVISGFGGSLLSALFIQSGISVXXXXXXXXXXXXXXSELLINWTIY 91
           RLEQEFGFVRIG LY++SGFGGSL+SALFIQSGISV              SELL NWTIY
Sbjct: 153 RLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGASGALFGLLGGMLSELLTNWTIY 212

Query: 90  ANKFXXXXXXXXXXXXXXXXXXLPHVDNFA 1
           ANK                   LPHVDNFA
Sbjct: 213 ANKLAALLTLLFIIVINLAVGVLPHVDNFA 242


>ref|XP_003597357.1| Rhomboid family protein AtRBL1 [Medicago truncatula]
           gi|355486405|gb|AES67608.1| Rhomboid family protein
           AtRBL1 [Medicago truncatula]
          Length = 383

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 53/90 (58%), Positives = 55/90 (61%)
 Frame = -3

Query: 270 RLEQEFGFVRIGCLYVISGFGGSLLSALFIQSGISVXXXXXXXXXXXXXXSELLINWTIY 91
           RLEQEFGFVRIG LYVISGFGGSLLS+LFIQ+GISV              SEL INWTIY
Sbjct: 150 RLEQEFGFVRIGFLYVISGFGGSLLSSLFIQTGISVGASGALFGLLGGMLSELFINWTIY 209

Query: 90  ANKFXXXXXXXXXXXXXXXXXXLPHVDNFA 1
           ANK                   LPHVDNFA
Sbjct: 210 ANKMAALLTLIIIVVINLAVGVLPHVDNFA 239


>ref|XP_002313433.1| predicted protein [Populus trichocarpa] gi|222849841|gb|EEE87388.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/90 (56%), Positives = 56/90 (62%)
 Frame = -3

Query: 270 RLEQEFGFVRIGCLYVISGFGGSLLSALFIQSGISVXXXXXXXXXXXXXXSELLINWTIY 91
           RLEQEFGF+R+G +YVISGFGGSLLSALFIQ+GISV              SEL+ NWTIY
Sbjct: 107 RLEQEFGFLRVGLVYVISGFGGSLLSALFIQTGISVGASGALFGLLGGMLSELITNWTIY 166

Query: 90  ANKFXXXXXXXXXXXXXXXXXXLPHVDNFA 1
           ANKF                  LPHVDNFA
Sbjct: 167 ANKFAALLTLLCIIAVNLAVGLLPHVDNFA 196


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