BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017259
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   235   6e-60
ref|XP_003540714.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specifi...   227   2e-57
emb|CBI16383.3| unnamed protein product [Vitis vinifera]              199   5e-50
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   199   5e-50
ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   189   6e-46

>ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Glycine max]
          Length = 488

 Score =  235 bits (600), Expect = 6e-60
 Identities = 113/129 (87%), Positives = 117/129 (90%)
 Frame = +1

Query: 1   RVFRVGSLKWLSGLPPSQTSQLQCKVRHGPGFYNCSLQMEVEGDDLEESAVVRISEDDQG 180
           RVFRVGS KWLSGLPP QT+QLQCKVRHGPGFY+CSLQMEVE D    SAVVRISEDDQG
Sbjct: 343 RVFRVGSFKWLSGLPPGQTTQLQCKVRHGPGFYDCSLQMEVEADGQCHSAVVRISEDDQG 402

Query: 181 LAAGQFTAFYDGRTCIGSGVILESWDDQSLPVCAKALEIARMEDKSKIGNPVKIKVKPDN 360
           LAAGQF AFY+GRTCIGSGVILE WDDQS PVC KALEIARMEDKSKIGNPVKIKVKPDN
Sbjct: 403 LAAGQFAAFYEGRTCIGSGVILEFWDDQSFPVCTKALEIARMEDKSKIGNPVKIKVKPDN 462

Query: 361 PQDVCDSTE 387
           PQ+VCDS E
Sbjct: 463 PQEVCDSAE 471


>ref|XP_003540714.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific 2-thiouridylase
           mnmA-like [Glycine max]
          Length = 467

 Score =  227 bits (579), Expect = 2e-57
 Identities = 113/129 (87%), Positives = 115/129 (89%)
 Frame = +1

Query: 1   RVFRVGSLKWLSGLPPSQTSQLQCKVRHGPGFYNCSLQMEVEGDDLEESAVVRISEDDQG 180
           RVF VGS KWLSGLPP QTSQLQCKVRHGPGFY+CSLQMEVEGD    SAVV ISEDDQG
Sbjct: 334 RVFCVGSFKWLSGLPPGQTSQLQCKVRHGPGFYDCSLQMEVEGDGQCRSAVVCISEDDQG 393

Query: 181 LAAGQFTAFYDGRTCIGSGVILESWDDQSLPVCAKALEIARMEDKSKIGNPVKIKVKPDN 360
           LAAGQF AFY+GRTCIGSGVILE WDDQS PVC KALEIARMEDKSKIGNPVKIKVKPDN
Sbjct: 394 LAAGQFAAFYEGRTCIGSGVILEFWDDQSFPVCTKALEIARMEDKSKIGNPVKIKVKPDN 453

Query: 361 PQDVCDSTE 387
           PQ VCDS E
Sbjct: 454 PQ-VCDSAE 461


>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  199 bits (506), Expect(2) = 5e-50
 Identities = 95/129 (73%), Positives = 106/129 (82%)
 Frame = +1

Query: 1   RVFRVGSLKWLSGLPPSQTSQLQCKVRHGPGFYNCSLQMEVEGDDLEESAVVRISEDDQG 180
           R+FRVGSLKW+S  PP Q +QLQCKVRHGPGFYNCS  ME   D  E+ AVV++SEDDQG
Sbjct: 369 RLFRVGSLKWISREPPGQINQLQCKVRHGPGFYNCSFTMEPGEDGHEDVAVVQLSEDDQG 428

Query: 181 LAAGQFTAFYDGRTCIGSGVILESWDDQSLPVCAKALEIARMEDKSKIGNPVKIKVKPDN 360
           LAAGQFTAFY GR+CIGSGVILESWDDQ  PVCAKALEIARMEDKSK+G PVKIKV+P+ 
Sbjct: 429 LAAGQFTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPET 488

Query: 361 PQDVCDSTE 387
           P    D  +
Sbjct: 489 PPKGSDQID 497



 Score = 25.0 bits (53), Expect(2) = 5e-50
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +2

Query: 395 VKHHKGVRNYRVAATEQNKQTYQRNAVSIFPFNRLQK---KW 511
           +K  + + N + A T++  ++ +  A S FP N LQK   KW
Sbjct: 499 IKLDRELANSQAAVTDEISRSSEGEARSRFPMNWLQKIREKW 540


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  199 bits (506), Expect(2) = 5e-50
 Identities = 95/129 (73%), Positives = 106/129 (82%)
 Frame = +1

Query: 1   RVFRVGSLKWLSGLPPSQTSQLQCKVRHGPGFYNCSLQMEVEGDDLEESAVVRISEDDQG 180
           R+FRVGSLKW+S  PP Q +QLQCKVRHGPGFYNCS  ME   D  E+ AVV++SEDDQG
Sbjct: 365 RLFRVGSLKWISREPPGQINQLQCKVRHGPGFYNCSFTMEPGEDGHEDVAVVQLSEDDQG 424

Query: 181 LAAGQFTAFYDGRTCIGSGVILESWDDQSLPVCAKALEIARMEDKSKIGNPVKIKVKPDN 360
           LAAGQFTAFY GR+CIGSGVILESWDDQ  PVCAKALEIARMEDKSK+G PVKIKV+P+ 
Sbjct: 425 LAAGQFTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPET 484

Query: 361 PQDVCDSTE 387
           P    D  +
Sbjct: 485 PPKGSDQID 493



 Score = 25.0 bits (53), Expect(2) = 5e-50
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +2

Query: 395 VKHHKGVRNYRVAATEQNKQTYQRNAVSIFPFNRLQK---KW 511
           +K  + + N + A T++  ++ +  A S FP N LQK   KW
Sbjct: 495 IKLDRELANSQAAVTDEISRSSEGEARSRFPMNWLQKIREKW 536


>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus] gi|449524848|ref|XP_004169433.1| PREDICTED:
           tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus]
          Length = 538

 Score =  189 bits (479), Expect = 6e-46
 Identities = 88/120 (73%), Positives = 101/120 (84%)
 Frame = +1

Query: 1   RVFRVGSLKWLSGLPPSQTSQLQCKVRHGPGFYNCSLQMEVEGDDLEESAVVRISEDDQG 180
           RVFRVGSLKWLSG PP Q ++LQCKVRHGP FY+C+L ME   D  E+ AVV +SEDDQG
Sbjct: 363 RVFRVGSLKWLSGFPPDQFTELQCKVRHGPSFYSCNLTMEHSEDGHEDVAVVHLSEDDQG 422

Query: 181 LAAGQFTAFYDGRTCIGSGVILESWDDQSLPVCAKALEIARMEDKSKIGNPVKIKVKPDN 360
           LAAGQF AFY GR+CIGSGVILESWDDQ  PVC KA+E A+MEDKSK+G P+KIKVKP++
Sbjct: 423 LAAGQFAAFYKGRSCIGSGVILESWDDQGFPVCQKAIENAQMEDKSKLGKPIKIKVKPES 482