BLASTX nr result

ID: Glycyrrhiza24_contig00017239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017239
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791...   620   e-175
ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814...   613   e-173
ref|XP_002519367.1| replication factor C / DNA polymerase III ga...   530   e-148
ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212...   506   e-141
ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|2...   506   e-141

>ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791561 [Glycine max]
          Length = 1236

 Score =  620 bits (1599), Expect = e-175
 Identities = 323/368 (87%), Positives = 339/368 (92%)
 Frame = -1

Query: 1106 ECADFISGKSSDLVEVDGTNKNGIDKARYLLKRLSVRSSSAYSRYTVFVIDECHLLPSKI 927
            EC DFISGKSSDL+EVDGTNK GIDKARYLLKRLS  SSSA  +YT+FVIDECHLLPSK 
Sbjct: 524  ECVDFISGKSSDLLEVDGTNKRGIDKARYLLKRLSSGSSSASPQYTIFVIDECHLLPSKT 583

Query: 926  WLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTEEN 747
            WLGFLKFLEEPP RVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKIST+EN
Sbjct: 584  WLGFLKFLEEPPLRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTQEN 643

Query: 746  LDVETDALDLIAVNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELA 567
            LDVE DALDLIA+NADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELA
Sbjct: 644  LDVEADALDLIAMNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELA 703

Query: 566  MSSDTAETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSYTVVDAKPDGSFFGGRSLNE 387
            MSSDT ETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSY V+D KPD SFFGGRSLNE
Sbjct: 704  MSSDTVETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSYAVIDTKPDDSFFGGRSLNE 763

Query: 386  SELERLKNALKLLSEAEKQLRTSSERSTWFTATLLQLGSVTSPDLTQSGSSRRQSCKTTT 207
            SELERLKNALKLLSEAEKQLRTSSERSTWFTATLLQLGS  SPDLTQS SSRRQSCK TT
Sbjct: 764  SELERLKNALKLLSEAEKQLRTSSERSTWFTATLLQLGSTPSPDLTQSSSSRRQSCK-TT 822

Query: 206  EDDPSSASREITSFKHMSDLQYMPQRSTSPASQQKAVNGSSSHLKGMSSKMDGFSLKSKP 27
            EDDPSS SR++TS  H SD QY+PQ+S   ASQQKAVN +S H K +SSK++GFSLKSKP
Sbjct: 823  EDDPSSVSRDVTSCTHKSDPQYVPQKSAYTASQQKAVNDNSHHQKDISSKIEGFSLKSKP 882

Query: 26   SNSPIIDD 3
            S+SP+IDD
Sbjct: 883  SSSPVIDD 890


>ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814391 [Glycine max]
          Length = 1237

 Score =  613 bits (1581), Expect = e-173
 Identities = 321/368 (87%), Positives = 337/368 (91%)
 Frame = -1

Query: 1106 ECADFISGKSSDLVEVDGTNKNGIDKARYLLKRLSVRSSSAYSRYTVFVIDECHLLPSKI 927
            EC DFISGKSSDL+EVDGTNK GIDKARYLLKRLS  SSSA  +YT+FVIDECHLLPSK 
Sbjct: 527  ECVDFISGKSSDLLEVDGTNKRGIDKARYLLKRLSTGSSSASPQYTIFVIDECHLLPSKT 586

Query: 926  WLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTEEN 747
            WLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKIST+EN
Sbjct: 587  WLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTQEN 646

Query: 746  LDVETDALDLIAVNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELA 567
            LDVE DALDLIA+NADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELA
Sbjct: 647  LDVEADALDLIAMNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELA 706

Query: 566  MSSDTAETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSYTVVDAKPDGSFFGGRSLNE 387
            MSSDT ETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSY V+D KPD SFFGGRSLN+
Sbjct: 707  MSSDTVETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSYAVIDTKPDDSFFGGRSLNQ 766

Query: 386  SELERLKNALKLLSEAEKQLRTSSERSTWFTATLLQLGSVTSPDLTQSGSSRRQSCKTTT 207
            SELERLKNALKLLSEAEKQLRTSSERSTWFTATLLQLGS  SPDLTQS SSRRQSCK TT
Sbjct: 767  SELERLKNALKLLSEAEKQLRTSSERSTWFTATLLQLGSTPSPDLTQSSSSRRQSCK-TT 825

Query: 206  EDDPSSASREITSFKHMSDLQYMPQRSTSPASQQKAVNGSSSHLKGMSSKMDGFSLKSKP 27
            EDDPSS SR++TS  H SD QY+P++S   ASQQKAVN SS H K +SSK++G  LKSKP
Sbjct: 826  EDDPSSVSRDVTSCMHKSDPQYVPRKSAYTASQQKAVNESSHHQKDISSKIEG--LKSKP 883

Query: 26   SNSPIIDD 3
            SN P+IDD
Sbjct: 884  SNGPVIDD 891


>ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223541434|gb|EEF42984.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1270

 Score =  530 bits (1366), Expect = e-148
 Identities = 279/363 (76%), Positives = 314/363 (86%)
 Frame = -1

Query: 1106 ECADFISGKSSDLVEVDGTNKNGIDKARYLLKRLSVRSSSAYSRYTVFVIDECHLLPSKI 927
            +C+DFISGK+ DL EVDGTNK GIDK R+LLK++S    +  SRY VF+IDECHLLPSK+
Sbjct: 527  DCSDFISGKARDLWEVDGTNKKGIDKVRHLLKKVSQWPPTGSSRYKVFLIDECHLLPSKM 586

Query: 926  WLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTEEN 747
            WL FLKFLEEPPQRVVFIFIT+D DNVPRT+QSRCQKYLFNKIKDGDIV RLRK+S+EEN
Sbjct: 587  WLAFLKFLEEPPQRVVFIFITTDPDNVPRTVQSRCQKYLFNKIKDGDIVARLRKVSSEEN 646

Query: 746  LDVETDALDLIAVNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELA 567
            LDVE DALDLIA+NADGSLRDAETML+QLSLLGKRITTSLVNELVGVV DEKLLELLEL+
Sbjct: 647  LDVELDALDLIALNADGSLRDAETMLDQLSLLGKRITTSLVNELVGVVPDEKLLELLELS 706

Query: 566  MSSDTAETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSYTVVDAKPDGSFFGGRSLNE 387
            MSSDTAETVKRAR+L+ SGVDP+VLMSQLA LIMDIIAG++ V DAK   S FGGRSL E
Sbjct: 707  MSSDTAETVKRARDLLHSGVDPLVLMSQLASLIMDIIAGTHNVADAKYSISLFGGRSLTE 766

Query: 386  SELERLKNALKLLSEAEKQLRTSSERSTWFTATLLQLGSVTSPDLTQSGSSRRQSCKTTT 207
            +ELERLK+ALKLLSEAEKQLR SS+RSTWFTATLLQLGSV SPDLTQS SSRRQS + TT
Sbjct: 767  AELERLKHALKLLSEAEKQLRVSSDRSTWFTATLLQLGSVPSPDLTQSSSSRRQSSR-TT 825

Query: 206  EDDPSSASREITSFKHMSDLQYMPQRSTSPASQQKAVNGSSSHLKGMSSKMDGFSLKSKP 27
            E+DPSSASRE+T +K  SD QY+ +RS+SPAS  KA+NG SSH         GF+ K +P
Sbjct: 826  EEDPSSASREVTVYKQKSDAQYLSRRSSSPASLYKAINGKSSHRGEF-----GFNSKLRP 880

Query: 26   SNS 18
            S+S
Sbjct: 881  SHS 883


>ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212356 [Cucumis sativus]
            gi|449478091|ref|XP_004155220.1| PREDICTED:
            uncharacterized protein LOC101227259 [Cucumis sativus]
          Length = 1267

 Score =  506 bits (1304), Expect = e-141
 Identities = 262/367 (71%), Positives = 300/367 (81%)
 Frame = -1

Query: 1106 ECADFISGKSSDLVEVDGTNKNGIDKARYLLKRLSVRSSSAYSRYTVFVIDECHLLPSKI 927
            EC DF++GK  DL+EVDGTNK GIDK RY LK LS   SSA+ RY +F++DECHLLPSK 
Sbjct: 551  ECTDFMAGKQKDLLEVDGTNKKGIDKIRYQLKLLSSGQSSAFFRYKIFLVDECHLLPSKA 610

Query: 926  WLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTEEN 747
            WL FLK  EEPPQRVVFIFIT+DLD+VPRTIQSRCQKYLFNKIKD D+V RL++IS +EN
Sbjct: 611  WLAFLKLFEEPPQRVVFIFITTDLDSVPRTIQSRCQKYLFNKIKDCDMVERLKRISADEN 670

Query: 746  LDVETDALDLIAVNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELA 567
            LDV+ DALDLIA+NADGSLRDAETMLEQLSLLGKRITTSLVNELVG+VSDEKLLELL LA
Sbjct: 671  LDVDLDALDLIAMNADGSLRDAETMLEQLSLLGKRITTSLVNELVGIVSDEKLLELLALA 730

Query: 566  MSSDTAETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSYTVVDAKPDGSFFGGRSLNE 387
            MSS+TAETVKRARELMDSGVDP+VLMSQLA LIMDIIAG+Y ++D K   S FGGRSL+E
Sbjct: 731  MSSNTAETVKRARELMDSGVDPLVLMSQLASLIMDIIAGTYNIIDTKDGASIFGGRSLSE 790

Query: 386  SELERLKNALKLLSEAEKQLRTSSERSTWFTATLLQLGSVTSPDLTQSGSSRRQSCKTTT 207
            +E+ERLK+ALK LSEAEKQLR SSERSTWFTATLLQLGS++SPD TQ+GSSRRQSCK TT
Sbjct: 791  AEVERLKHALKFLSEAEKQLRVSSERSTWFTATLLQLGSISSPDFTQTGSSRRQSCK-TT 849

Query: 206  EDDPSSASREITSFKHMSDLQYMPQRSTSPASQQKAVNGSSSHLKGMSSKMDGFSLKSKP 27
            +DDPSS S    ++K  S  Q MP    SP S     NG+ ++   M   +D     SKP
Sbjct: 850  DDDPSSTSNGTIAYKQKSFAQLMPPNLGSPTSLCNLKNGNYNNQADMVPMVDNLIYNSKP 909

Query: 26   SNSPIID 6
            ++   I+
Sbjct: 910  THKQFIE 916


>ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|222839109|gb|EEE77460.1|
            predicted protein [Populus trichocarpa]
          Length = 1197

 Score =  506 bits (1304), Expect = e-141
 Identities = 271/370 (73%), Positives = 307/370 (82%), Gaps = 2/370 (0%)
 Frame = -1

Query: 1106 ECADFISGKSSDLVEVDGTNKNGIDKARYLLKRLSVRSSSAYSRYTVFVIDECHLLPSKI 927
            EC+D ISGK+ DL EVDGT+K GIDK RYLLK++S R     S Y VF+IDECHLLPSK+
Sbjct: 549  ECSDSISGKTRDLWEVDGTDKKGIDKVRYLLKKISHRPPLGSSHYKVFLIDECHLLPSKM 608

Query: 926  WLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTEEN 747
            WL FLKFLEEPPQRVVFIF+T+D DNVPRT+QSRCQKYLFNKIKDGDIV RLRKIS EEN
Sbjct: 609  WLAFLKFLEEPPQRVVFIFVTTDPDNVPRTVQSRCQKYLFNKIKDGDIVARLRKISKEEN 668

Query: 746  LDVETDALDLIAVNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELA 567
            LDVE  ALDLI++NADGSLRDAETML+QLSLLGK+ITTSLVNELVGVVSDEKLLELLELA
Sbjct: 669  LDVELGALDLISLNADGSLRDAETMLDQLSLLGKKITTSLVNELVGVVSDEKLLELLELA 728

Query: 566  MSSDTAETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSYTVVDAKPDGSFFGGRSLNE 387
            MSSDTAETVKRAR+LMDSGVDPMVLMSQLA LIMDIIAG+Y VVDAK   S FG  +L E
Sbjct: 729  MSSDTAETVKRARDLMDSGVDPMVLMSQLASLIMDIIAGTYNVVDAKHGDSLFGTHNLTE 788

Query: 386  SELERLKNALKLLSEAEKQLRTSSERSTWFTATLLQLGSVTSPDLTQSGSSRRQSCKTTT 207
            +ELERLK+AL+LLSEAEKQLR SS+RSTWFTATLLQLGS  S DLTQS SSRRQS + TT
Sbjct: 789  AELERLKHALRLLSEAEKQLRISSDRSTWFTATLLQLGSTPSMDLTQSSSSRRQSSR-TT 847

Query: 206  EDDPSSASREITSFKHMSDLQYMPQRSTSPASQQKAVNGSSSHLK--GMSSKMDGFSLKS 33
            E+DPSSAS+E   +K  S+ QY+ QRS+SP S  + +NG SS     G ++K     L +
Sbjct: 848  EEDPSSASKESKVYKTKSNAQYLTQRSSSPPSLYREINGCSSQQGEFGFNAKAPRSRLVN 907

Query: 32   KPSNSPIIDD 3
              ++S  +DD
Sbjct: 908  SRTSSTSLDD 917


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