BLASTX nr result

ID: Glycyrrhiza24_contig00017234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017234
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549584.1| PREDICTED: LOW QUALITY PROTEIN: PHD and RING...   104   6e-21
gb|ACU21052.1| unknown [Glycine max]                                  104   6e-21
ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap...    84   1e-14
ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266...    80   1e-13
gb|AFW86355.1| hypothetical protein ZEAMMB73_340557 [Zea mays]         77   1e-12

>ref|XP_003549584.1| PREDICTED: LOW QUALITY PROTEIN: PHD and RING finger
           domain-containing protein 1-like [Glycine max]
          Length = 182

 Score =  104 bits (260), Expect = 6e-21
 Identities = 45/50 (90%), Positives = 47/50 (94%)
 Frame = +1

Query: 184 ICYAERGVSIAGEIDCCNHYFCFVCIMEWAKHESRCPICRQRFSNVCRPP 333
           ICYAE GVSIAGEIDCC+H+FCFVCIMEWAKHESRCPICRQRFSNV R P
Sbjct: 30  ICYAESGVSIAGEIDCCSHHFCFVCIMEWAKHESRCPICRQRFSNVRRLP 79


>gb|ACU21052.1| unknown [Glycine max]
          Length = 128

 Score =  104 bits (260), Expect = 6e-21
 Identities = 45/50 (90%), Positives = 47/50 (94%)
 Frame = +1

Query: 184 ICYAERGVSIAGEIDCCNHYFCFVCIMEWAKHESRCPICRQRFSNVCRPP 333
           ICYAE GVSIAGEIDCC+H+FCFVCIMEWAKHESRCPICRQRFSNV R P
Sbjct: 30  ICYAESGVSIAGEIDCCSHHFCFVCIMEWAKHESRCPICRQRFSNVRRLP 79


>ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
           putative [Ricinus communis] gi|223546200|gb|EEF47702.1|
           splicing factor, arginine/serine-rich 2,rnap interacting
           protein, putative [Ricinus communis]
          Length = 632

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 32/51 (62%), Positives = 43/51 (84%)
 Frame = +1

Query: 184 ICYAERGVSIAGEIDCCNHYFCFVCIMEWAKHESRCPICRQRFSNVCRPPK 336
           IC +E   ++ G+ID C+HYFCF+CIMEWAK ESRCP+C++RF+N+ RPPK
Sbjct: 50  ICLSENWSAMRGQIDSCDHYFCFICIMEWAKIESRCPMCKRRFNNIHRPPK 100


>ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266325 [Vitis vinifera]
           gi|297734114|emb|CBI15361.3| unnamed protein product
           [Vitis vinifera]
          Length = 648

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 33/51 (64%), Positives = 40/51 (78%)
 Frame = +1

Query: 184 ICYAERGVSIAGEIDCCNHYFCFVCIMEWAKHESRCPICRQRFSNVCRPPK 336
           IC  E   +I G +D C+HYFCFVCIMEWAK ESRCP+C++RFS + RPPK
Sbjct: 55  ICLLEDDRAIRGWVDSCDHYFCFVCIMEWAKVESRCPMCKRRFSTIRRPPK 105


>gb|AFW86355.1| hypothetical protein ZEAMMB73_340557 [Zea mays]
          Length = 661

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 30/50 (60%), Positives = 36/50 (72%)
 Frame = +1

Query: 184 ICYAERGVSIAGEIDCCNHYFCFVCIMEWAKHESRCPICRQRFSNVCRPP 333
           ICY +   +I GE+DCC H+FCFVCIM W + ESRCP CR RF  + RPP
Sbjct: 41  ICYLDGRRAIRGELDCCAHFFCFVCIMAWGRVESRCPFCRARFHTIRRPP 90


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