BLASTX nr result

ID: Glycyrrhiza24_contig00017227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017227
         (1419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43283.1| unknown [Lotus japonicus]                              462   e-127
ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-l...   456   e-126
gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]            377   e-102
gb|AFK45491.1| unknown [Lotus japonicus]                              370   e-100
ref|NP_001242093.1| uncharacterized protein LOC100807736 [Glycin...   354   2e-99

>gb|AFK43283.1| unknown [Lotus japonicus]
          Length = 299

 Score =  462 bits (1188), Expect = e-127
 Identities = 243/301 (80%), Positives = 263/301 (87%), Gaps = 5/301 (1%)
 Frame = -2

Query: 1217 MDAKAAQVLQLPGLVQPEKVGRRTGC--RLSRTGEPQKLRVFV-SGKLHSTI--RRRIAP 1053
            MDA  A  LQLPGLVQPEK+GR   C   LSR  +P KLR  + S KLHS+   RRRIA 
Sbjct: 1    MDAAKA-ALQLPGLVQPEKIGRIPTCSFNLSRD-QPLKLRGSIYSAKLHSSKIHRRRIAS 58

Query: 1052 LEVACSYDKIPASTLQSGSHKAYLDEELILKNRSQQIQPYLNGRCIYLVGMMGSGKTTVG 873
            +EVACSYD +PASTL+SGS +A LD+ELIL+NRSQ+IQPYLNGRCIYLVGMMGSGKTTVG
Sbjct: 59   MEVACSYDNLPASTLESGSRRAPLDDELILENRSQEIQPYLNGRCIYLVGMMGSGKTTVG 118

Query: 872  KIMSQVLSYSFCDCDTLIEEEAGGNSVADIFKHYGESFFRDKETEALHKLSLMHRLVIST 693
            KIMS+VL Y FCD D L+EEE GGNSVADIF  YGESFFRDKETEALHKLS+MHR ++ST
Sbjct: 119  KIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLSMMHRHIVST 178

Query: 692  GGGAVMRPINWRYMHKGISVWLDVPLEALAQRIAAVGTNSRPLLHYEAGDAYTRALMRLS 513
            GGGAVMRPINW+YMHKGISVWLDVP+EALAQRIAAVGTNSRPLLHYEAGDAYTRALMRLS
Sbjct: 179  GGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDAYTRALMRLS 238

Query: 512  ALFEERGEAYANANARVSLENIATKLGRRDVSDLSPTAIAIEALEQIDNFLKAEDGGYAG 333
            ALFEERGEAYANA+ARVSLE IATK G+RDV DLSPTAIAIEALEQID FLK EDG YAG
Sbjct: 239  ALFEERGEAYANASARVSLEKIATKRGQRDVLDLSPTAIAIEALEQIDAFLKGEDGRYAG 298

Query: 332  C 330
            C
Sbjct: 299  C 299


>ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
          Length = 295

 Score =  456 bits (1173), Expect = e-126
 Identities = 235/298 (78%), Positives = 256/298 (85%), Gaps = 2/298 (0%)
 Frame = -2

Query: 1217 MDAKAAQVLQLPGLVQPEKVGRR--TGCRLSRTGEPQKLRVFVSGKLHSTIRRRIAPLEV 1044
            MD KAA  LQL  +VQPE +GRR  + CRL  + EPQ LRVFVS  +   +RRR   LEV
Sbjct: 1    MDVKAAPRLQLSAVVQPESIGRRPPSTCRLGVSREPQSLRVFVSSTM---MRRRTTALEV 57

Query: 1043 ACSYDKIPASTLQSGSHKAYLDEELILKNRSQQIQPYLNGRCIYLVGMMGSGKTTVGKIM 864
            +CSY  I AS L+SGS +A LDEELILKNRSQ+IQPYLNGRCIYLVGMMGSGKTTVGKIM
Sbjct: 58   SCSYGNISASILESGSVRAPLDEELILKNRSQEIQPYLNGRCIYLVGMMGSGKTTVGKIM 117

Query: 863  SQVLSYSFCDCDTLIEEEAGGNSVADIFKHYGESFFRDKETEALHKLSLMHRLVISTGGG 684
            SQVL YSFCD D L+EEE GGNSVADIFK +GE+FFR+KETE LHKLSLMH+LVISTGGG
Sbjct: 118  SQVLGYSFCDSDALVEEEVGGNSVADIFKQHGETFFRNKETEVLHKLSLMHQLVISTGGG 177

Query: 683  AVMRPINWRYMHKGISVWLDVPLEALAQRIAAVGTNSRPLLHYEAGDAYTRALMRLSALF 504
            AV RPINW+YMHKG+SVWLDVP+EALAQRIAAVGTNSRPLLHYEAGD YTRA MRLSALF
Sbjct: 178  AVTRPINWKYMHKGVSVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDPYTRAFMRLSALF 237

Query: 503  EERGEAYANANARVSLENIATKLGRRDVSDLSPTAIAIEALEQIDNFLKAEDGGYAGC 330
            EERGEAYANANARVSL+NIA KLG+RDVS+LSPT IAIEALEQIDNFLK E G YA C
Sbjct: 238  EERGEAYANANARVSLKNIAIKLGKRDVSELSPTDIAIEALEQIDNFLKGEGGRYAEC 295


>gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
          Length = 302

 Score =  377 bits (969), Expect = e-102
 Identities = 197/301 (65%), Positives = 235/301 (78%), Gaps = 7/301 (2%)
 Frame = -2

Query: 1217 MDAKAAQVLQLPGLVQPEKVGRRT--GCRLSRT-GEPQKLRVFVSGKLHSTIRR----RI 1059
            MD K A  L +   +  E+  RRT    R+SR   E  +L V VS +L    R     + 
Sbjct: 1    MDGKVANGLVVSPRIGSERFARRTCGSVRVSRRFREQDRLPVLVSAQLQDKTRNSNWHKT 60

Query: 1058 APLEVACSYDKIPASTLQSGSHKAYLDEELILKNRSQQIQPYLNGRCIYLVGMMGSGKTT 879
            A LEV+CSY   PAS L+SG   A  D+ LILKN+SQ+I+PYL+GRCIYLVGMMGSGKTT
Sbjct: 61   ASLEVSCSYKNFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTT 120

Query: 878  VGKIMSQVLSYSFCDCDTLIEEEAGGNSVADIFKHYGESFFRDKETEALHKLSLMHRLVI 699
            VGK++SQVLSY+F D DTL+E++   NSVA+IF  YGE FFRDKETE L KLSLMHRLV+
Sbjct: 121  VGKVLSQVLSYAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKETEVLRKLSLMHRLVV 180

Query: 698  STGGGAVMRPINWRYMHKGISVWLDVPLEALAQRIAAVGTNSRPLLHYEAGDAYTRALMR 519
            STGGGAV+RPINW+YM KGISVWLDVPLEALA+RIAAVGT SRPLLH+++GDAYT+  MR
Sbjct: 181  STGGGAVVRPINWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHHDSGDAYTKTFMR 240

Query: 518  LSALFEERGEAYANANARVSLENIATKLGRRDVSDLSPTAIAIEALEQIDNFLKAEDGGY 339
            L++L EER EAYANANARVSLE++A KLG RDVS+L+PTAIAIEALEQI+ FLK E+G +
Sbjct: 241  LTSLMEERSEAYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFLKEENGDF 300

Query: 338  A 336
            A
Sbjct: 301  A 301


>gb|AFK45491.1| unknown [Lotus japonicus]
          Length = 299

 Score =  370 bits (949), Expect = e-100
 Identities = 197/298 (66%), Positives = 233/298 (78%), Gaps = 7/298 (2%)
 Frame = -2

Query: 1217 MDAKAAQVLQLPGLVQPEKVGRRTGCRLSRTG----EPQKLRVFVSGKLHSTIR--RRIA 1056
            M+AKA     L  +V  +K+GR       R      +P+K + FVS +L    R  +R  
Sbjct: 1    MEAKAVHSFHLSTMVVGDKLGRTGPSSSLRMSSGFVKPKKFQGFVSHRLSLLQRSQQRTV 60

Query: 1055 PLEVACS-YDKIPASTLQSGSHKAYLDEELILKNRSQQIQPYLNGRCIYLVGMMGSGKTT 879
            P+ VACS Y+ IPAS L++GS +  LDEE+ILK++SQ+I+PYLNGRCIYLVGMMGSGKTT
Sbjct: 61   PVVVACSSYNNIPASILETGSFRDPLDEEMILKSKSQEIEPYLNGRCIYLVGMMGSGKTT 120

Query: 878  VGKIMSQVLSYSFCDCDTLIEEEAGGNSVADIFKHYGESFFRDKETEALHKLSLMHRLVI 699
            VGKI+S+VLSYSF D D LIEEE    SVADIFK+YGE+FFR+KETE L KLS+M R VI
Sbjct: 121  VGKILSEVLSYSFFDSDALIEEEVDKTSVADIFKNYGEAFFRNKETEILKKLSMMRRDVI 180

Query: 698  STGGGAVMRPINWRYMHKGISVWLDVPLEALAQRIAAVGTNSRPLLHYEAGDAYTRALMR 519
            STGGGAV++P NW+YMHKGISVWLDVP+EALA+RI  VGTNSRPLLHYEAGDAYT+  MR
Sbjct: 181  STGGGAVVKPTNWKYMHKGISVWLDVPVEALARRITKVGTNSRPLLHYEAGDAYTKTFMR 240

Query: 518  LSALFEERGEAYANANARVSLENIATKLGRRDVSDLSPTAIAIEALEQIDNFLKAEDG 345
            LS+LFEER EA+ANANARVSLENIA KL ++D S LSP  IAIEALEQI+ FLK EDG
Sbjct: 241  LSSLFEERSEAHANANARVSLENIAAKLDQKDASHLSPKTIAIEALEQINGFLKGEDG 298


>ref|NP_001242093.1| uncharacterized protein LOC100807736 [Glycine max]
            gi|255642221|gb|ACU21375.1| unknown [Glycine max]
          Length = 253

 Score =  354 bits (908), Expect(2) = 2e-99
 Identities = 182/242 (75%), Positives = 203/242 (83%), Gaps = 3/242 (1%)
 Frame = -2

Query: 1217 MDAKAAQVLQLPGLVQPEKVGRR---TGCRLSRTGEPQKLRVFVSGKLHSTIRRRIAPLE 1047
            MD KAAQ LQL  +VQPE+ GRR   + CRL  + EPQ LRVFVS  +   +RRR   LE
Sbjct: 1    MDVKAAQRLQLSAVVQPERFGRRPPFSTCRLGVSREPQSLRVFVSPMM---MRRRTTALE 57

Query: 1046 VACSYDKIPASTLQSGSHKAYLDEELILKNRSQQIQPYLNGRCIYLVGMMGSGKTTVGKI 867
            V+ SYD I AS L+SGS  A LDEELILKNRSQ+ QPYLNGRCIYLVGMMGSGKTTVGKI
Sbjct: 58   VSSSYDNISASILESGSVHAPLDEELILKNRSQETQPYLNGRCIYLVGMMGSGKTTVGKI 117

Query: 866  MSQVLSYSFCDCDTLIEEEAGGNSVADIFKHYGESFFRDKETEALHKLSLMHRLVISTGG 687
            MSQVL YSFCD D L+EEE GGNSV DIF+ +GE+FFR+KETE LHKLSL+HRLVISTGG
Sbjct: 118  MSQVLGYSFCDSDALVEEEVGGNSVVDIFEQHGETFFRNKETEVLHKLSLLHRLVISTGG 177

Query: 686  GAVMRPINWRYMHKGISVWLDVPLEALAQRIAAVGTNSRPLLHYEAGDAYTRALMRLSAL 507
            GAVMRPINW+YMHKG+SVWLDVP+EALAQRIAAVGTNSRPLL+YEAGD YTRA MRLSA+
Sbjct: 178  GAVMRPINWKYMHKGVSVWLDVPVEALAQRIAAVGTNSRPLLNYEAGDPYTRAFMRLSAI 237

Query: 506  FE 501
             +
Sbjct: 238  LK 239



 Score = 37.0 bits (84), Expect(2) = 2e-99
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -3

Query: 505 LKREVKHMPTPMPGSH 458
           LKREVKHMP PMPGSH
Sbjct: 238 LKREVKHMPMPMPGSH 253


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