BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017195
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containi...   230   2e-58
ref|XP_003625566.1| Pentatricopeptide repeat-containing protein ...   230   2e-58
ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...   143   3e-32
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,...   128   8e-28
dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]                127   1e-27

>ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Glycine max]
          Length = 811

 Score =  230 bits (586), Expect = 2e-58
 Identities = 122/149 (81%), Positives = 129/149 (86%)
 Frame = -3

Query: 646  AHLLKRVADILAIDVQGLTKVEARLVILAVLRMIKENYAFGHSVNDDLLIIIGATKADEN 467
            AHLLKRVADILAIDVQGLTKVEARLV+LAVLRMIKENY  GHSVNDD+LIIIGATK DEN
Sbjct: 667  AHLLKRVADILAIDVQGLTKVEARLVVLAVLRMIKENYGLGHSVNDDILIIIGATKVDEN 726

Query: 466  PSKDILEVQEAMIKILKNELGLEVFPARTRFAPRDTAKLENPNLSNLNIEALPRENALST 287
            PSK ILEVQEA+IK+L+NELGLEVFPA+TR A  DTA LE PN SNL+IEA P ENAL  
Sbjct: 727  PSKHILEVQEAIIKLLRNELGLEVFPAKTRLALSDTANLEYPNFSNLSIEAQPGENALG- 785

Query: 286  TMEFQTRRPAVLQRLKVTKKSLYRWLQRK 200
               FQTRRP VL RLKVTKKSLYRWL RK
Sbjct: 786  ---FQTRRPGVLVRLKVTKKSLYRWLHRK 811


>ref|XP_003625566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355500581|gb|AES81784.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 829

 Score =  230 bits (586), Expect = 2e-58
 Identities = 125/174 (71%), Positives = 135/174 (77%), Gaps = 21/174 (12%)
 Frame = -3

Query: 646  AHLLKRVADILAIDVQGLTKVEARLVILAVLRMIKENYAF-------------------- 527
            +HLLKRVADILAIDVQGLTKVEARLVILAVLRMIKENYA                     
Sbjct: 656  SHLLKRVADILAIDVQGLTKVEARLVILAVLRMIKENYAIVSKLRPQKNVQLNMLLTVLN 715

Query: 526  -GHSVNDDLLIIIGATKADENPSKDILEVQEAMIKILKNELGLEVFPARTRFAPRDTAKL 350
             GHSV DD+LIIIGATKADENPSK+IL VQEAM+K+L NELGLE  PA TRFAP  T KL
Sbjct: 716  TGHSVKDDILIIIGATKADENPSKEILVVQEAMVKLLTNELGLEALPATTRFAPSHTPKL 775

Query: 349  ENPNLSNLNIEALPRENALSTTMEFQTRRPAVLQRLKVTKKSLYRWLQRKVSIK 188
            +NP  SNL IEALP ENAL T+M F TRRPAVLQRLKVTKKSL+RWLQRK ++K
Sbjct: 776  QNPEFSNLTIEALPGENALPTSMGFHTRRPAVLQRLKVTKKSLHRWLQRKSNVK 829


>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic [Vitis vinifera]
            gi|297741486|emb|CBI32618.3| unnamed protein product
            [Vitis vinifera]
          Length = 842

 Score =  143 bits (360), Expect = 3e-32
 Identities = 81/150 (54%), Positives = 102/150 (68%)
 Frame = -3

Query: 646  AHLLKRVADILAIDVQGLTKVEARLVILAVLRMIKENYAFGHSVNDDLLIIIGATKADEN 467
            AHL K VA+ LAID+QGLT+VEAR+V+LAVLRMIKENY  GH + DD+LII+G  K D N
Sbjct: 688  AHLQKSVAESLAIDLQGLTQVEARIVVLAVLRMIKENYILGHPIKDDILIILGIKKVDAN 747

Query: 466  PSKDILEVQEAMIKILKNELGLEVFPARTRFAPRDTAKLENPNLSNLNIEALPRENALST 287
              +    V+ A+IK+L++ELGLEV  A  + A      L  P  S+ + +     N L T
Sbjct: 748  LVEHESPVKGAIIKLLQDELGLEVAFAGPKIALDKRINLGGPPGSDPDWQEALGRNRLPT 807

Query: 286  TMEFQTRRPAVLQRLKVTKKSLYRWLQRKV 197
             +E  TRRPAVLQR KVT+KSL  WLQR+V
Sbjct: 808  ELESSTRRPAVLQRFKVTRKSLDHWLQRRV 837


>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 786

 Score =  128 bits (322), Expect = 8e-28
 Identities = 76/150 (50%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
 Frame = -3

Query: 646  AHLLKRVADILAIDVQGLTKVEARLVILAVLRMIKENYAFGHSVNDDLLIIIGATKADEN 467
            AHL   VA+ L++D+QGLTKVEAR+V+LAVLRM+KENY  GH V DD+ I +G  K D  
Sbjct: 635  AHLHHNVAESLSVDLQGLTKVEARIVVLAVLRMVKENYIQGHLVKDDMSITLGIDKVDVL 694

Query: 466  PSKDILEVQEAMIKILKNELGLEVFPARTRFAPRDTAKLENPNLSNLN-IEALPRENALS 290
            P+    EV++A+ K+L NELGLEV     R+       LE P  S  N  ++  REN   
Sbjct: 695  PATQKAEVKDAIFKLLHNELGLEVLIVVPRYTADLETDLEIPLNSYQNWSKSSGRENIRV 754

Query: 289  TTMEFQTRRPAVLQRLKVTKKSLYRWLQRK 200
            ++     RRP VLQRLKVT+ SL+ WLQRK
Sbjct: 755  SS----ARRPLVLQRLKVTRNSLHSWLQRK 780


>dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]
          Length = 852

 Score =  127 bits (320), Expect = 1e-27
 Identities = 73/148 (49%), Positives = 98/148 (66%)
 Frame = -3

Query: 643  HLLKRVADILAIDVQGLTKVEARLVILAVLRMIKENYAFGHSVNDDLLIIIGATKADENP 464
            H+ +R A  LAID+QGLTK+EARLV+LAVLRMIKE+Y  G  V DD+LIIIG  +A+   
Sbjct: 714  HMQERTAGNLAIDLQGLTKIEARLVVLAVLRMIKEDYMRGDVVIDDVLIIIGTDEANTVS 773

Query: 463  SKDILEVQEAMIKILKNELGLEVFPARTRFAPRDTAKLENPNLSNLNIEALPRENALSTT 284
             K  + VQEA++K+L++EL L V PA  R   +D   +++ +          +EN  S  
Sbjct: 774  GKQEITVQEALVKLLRDELSLVVLPAGQRNIIQDAHCVDDAD----------QENTKSFV 823

Query: 283  MEFQTRRPAVLQRLKVTKKSLYRWLQRK 200
                TRRPA+L+RL VTK SLY+WLQR+
Sbjct: 824  SISSTRRPAILERLMVTKASLYQWLQRR 851