BLASTX nr result

ID: Glycyrrhiza24_contig00017177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017177
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]     221   4e-56
ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...   187   8e-46
emb|CBI29966.3| unnamed protein product [Vitis vinifera]              187   8e-46
ref|XP_002531584.1| programmed cell death protein, putative [Ric...   184   5e-45
ref|XP_004166831.1| PREDICTED: protein RRP5 homolog, partial [Cu...   177   1e-42

>ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 1885

 Score =  221 bits (564), Expect = 4e-56
 Identities = 110/137 (80%), Positives = 119/137 (86%)
 Frame = +3

Query: 3    DILGGRISKILPRVGGLLVQIGPHTYGKVHFTELTDAWVPDPLSGYHEGQFVKCVVLEVS 182
            DILGGR+SKILP VGGLLVQ+GP TYGKVHFTEL D WVPDPLSGYHE QFVKC+VLEVS
Sbjct: 1230 DILGGRVSKILPGVGGLLVQVGPRTYGKVHFTELADTWVPDPLSGYHEEQFVKCIVLEVS 1289

Query: 183  HTVQGTVHVDLSFRSSNVMRSQDSADVHSNVHANDKRVEKIEDLRPDMVVKGYVKNVTPK 362
            HTV+GT+HVDLS  SSNV  SQDSA     V+AN K VEKIEDL PDM+VKGY+KNVT K
Sbjct: 1290 HTVKGTIHVDLSLGSSNVKLSQDSA-----VNANSKCVEKIEDLHPDMIVKGYIKNVTSK 1344

Query: 363  GCFILLSRKIDAKILLS 413
            GCFI+LSRKIDAKILLS
Sbjct: 1345 GCFIMLSRKIDAKILLS 1361


>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score =  187 bits (475), Expect = 8e-46
 Identities = 94/137 (68%), Positives = 109/137 (79%)
 Frame = +3

Query: 3    DILGGRISKILPRVGGLLVQIGPHTYGKVHFTELTDAWVPDPLSGYHEGQFVKCVVLEVS 182
            D LGGRISKILP VGGLLVQIGPH YGKVHFTEL D+WV DPLSGYHEGQFVKC VLE+ 
Sbjct: 1239 DTLGGRISKILPGVGGLLVQIGPHLYGKVHFTELKDSWVSDPLSGYHEGQFVKCKVLEIG 1298

Query: 183  HTVQGTVHVDLSFRSSNVMRSQDSADVHSNVHANDKRVEKIEDLRPDMVVKGYVKNVTPK 362
            H+ +GTVHVDLS  SS            + +H+ + RVEKI++L  DM+V+GYVKNVT K
Sbjct: 1299 HSEKGTVHVDLSLWSS-----------LNGMHSPNSRVEKIDNLHSDMLVQGYVKNVTSK 1347

Query: 363  GCFILLSRKIDAKILLS 413
            GCFILLSRK+DA+ILL+
Sbjct: 1348 GCFILLSRKLDARILLA 1364


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score =  187 bits (475), Expect = 8e-46
 Identities = 94/137 (68%), Positives = 109/137 (79%)
 Frame = +3

Query: 3    DILGGRISKILPRVGGLLVQIGPHTYGKVHFTELTDAWVPDPLSGYHEGQFVKCVVLEVS 182
            D LGGRISKILP VGGLLVQIGPH YGKVHFTEL D+WV DPLSGYHEGQFVKC VLE+ 
Sbjct: 1222 DTLGGRISKILPGVGGLLVQIGPHLYGKVHFTELKDSWVSDPLSGYHEGQFVKCKVLEIG 1281

Query: 183  HTVQGTVHVDLSFRSSNVMRSQDSADVHSNVHANDKRVEKIEDLRPDMVVKGYVKNVTPK 362
            H+ +GTVHVDLS  SS            + +H+ + RVEKI++L  DM+V+GYVKNVT K
Sbjct: 1282 HSEKGTVHVDLSLWSS-----------LNGMHSPNSRVEKIDNLHSDMLVQGYVKNVTSK 1330

Query: 363  GCFILLSRKIDAKILLS 413
            GCFILLSRK+DA+ILL+
Sbjct: 1331 GCFILLSRKLDARILLA 1347


>ref|XP_002531584.1| programmed cell death protein, putative [Ricinus communis]
            gi|223528780|gb|EEF30787.1| programmed cell death
            protein, putative [Ricinus communis]
          Length = 1330

 Score =  184 bits (468), Expect = 5e-45
 Identities = 92/138 (66%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3    DILGGRISKILPRVGGLLVQIGPHTYGKVHFTELTDAWVPDPLSGYHEGQFVKCVVLEVS 182
            DI+GG+ISKIL  VGG+LVQIGPH +GKVH+TEL ++WVP+PL GY EGQFVKC VLE+S
Sbjct: 670  DIVGGKISKILSGVGGVLVQIGPHVHGKVHYTELQESWVPNPLDGYREGQFVKCKVLEIS 729

Query: 183  HTVQGTVHVDLSFR-SSNVMRSQDSADVHSNVHANDKRVEKIEDLRPDMVVKGYVKNVTP 359
             + +GT H+DLS R S + M SQ+S+++  N    D+RVEKI+DL+P+ VV+GYVKNV P
Sbjct: 730  RSDKGTTHIDLSLRFSLDGMLSQNSSELSKNA---DQRVEKIDDLQPNTVVQGYVKNVAP 786

Query: 360  KGCFILLSRKIDAKILLS 413
            KGCFI LSRKIDAKILLS
Sbjct: 787  KGCFIFLSRKIDAKILLS 804


>ref|XP_004166831.1| PREDICTED: protein RRP5 homolog, partial [Cucumis sativus]
          Length = 1323

 Score =  177 bits (448), Expect = 1e-42
 Identities = 87/137 (63%), Positives = 109/137 (79%)
 Frame = +3

Query: 3    DILGGRISKILPRVGGLLVQIGPHTYGKVHFTELTDAWVPDPLSGYHEGQFVKCVVLEVS 182
            DI+GGRISKILP VGGLLVQIGPH +G+VH+TELTD  VPDPLSGY EGQFVKC V+E++
Sbjct: 661  DIVGGRISKILPGVGGLLVQIGPHLFGRVHYTELTDCLVPDPLSGYKEGQFVKCKVIEIT 720

Query: 183  HTVQGTVHVDLSFRSSNVMRSQDSADVHSNVHANDKRVEKIEDLRPDMVVKGYVKNVTPK 362
            H V+GT H+DLS RSS  +  Q + +  ++ +    RV KIED+   M V+GYVKN++PK
Sbjct: 721  HAVKGTTHIDLSLRSSAGILCQKNIECSNHENIASGRV-KIEDIHAHMEVQGYVKNISPK 779

Query: 363  GCFILLSRKIDAKILLS 413
            GCFI+LSR ++AKILLS
Sbjct: 780  GCFIMLSRGLEAKILLS 796


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