BLASTX nr result

ID: Glycyrrhiza24_contig00017169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017169
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding pro...   224   6e-57
ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding pro...   222   2e-56
ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   218   4e-55
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              218   4e-55
ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|2...   212   2e-53

>ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 575

 Score =  224 bits (571), Expect = 6e-57
 Identities = 112/128 (87%), Positives = 119/128 (92%)
 Frame = +3

Query: 3   TIEKGKCTENSLEIVEGMQFDRGYLSPYFVTDRRKMTVELHNCKLLLVDKKITNAKELLN 182
           TIE G+ TENSLEIVEGMQFDRGYLSPYFV +RRKMTVELHNCKLLLVDKKIT  KEL+N
Sbjct: 176 TIETGRSTENSLEIVEGMQFDRGYLSPYFVNNRRKMTVELHNCKLLLVDKKITKTKELIN 235

Query: 183 MLKTAVKEKYPIVIVAEGIEQEALAPVIKNKLRGMLKVAAIKAPAFGERKTHYLEDIAIL 362
           +L  + KEKYP++IVAEGIEQEALAPVIKNKLRG LKVAAIKAPAFGERKTHYLEDIAIL
Sbjct: 236 ILNNSAKEKYPVLIVAEGIEQEALAPVIKNKLRGALKVAAIKAPAFGERKTHYLEDIAIL 295

Query: 363 TGGTVIRE 386
           TGGTVIRE
Sbjct: 296 TGGTVIRE 303


>ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 646

 Score =  222 bits (566), Expect = 2e-56
 Identities = 111/128 (86%), Positives = 118/128 (92%)
 Frame = +3

Query: 3   TIEKGKCTENSLEIVEGMQFDRGYLSPYFVTDRRKMTVELHNCKLLLVDKKITNAKELLN 182
           TIE G+ TEN LEIVEGMQFDRGYLSPYFV +RRKMTVELHNCKLLLVDKKIT  KEL+N
Sbjct: 206 TIETGRSTENCLEIVEGMQFDRGYLSPYFVNNRRKMTVELHNCKLLLVDKKITKTKELIN 265

Query: 183 MLKTAVKEKYPIVIVAEGIEQEALAPVIKNKLRGMLKVAAIKAPAFGERKTHYLEDIAIL 362
           +L  + KEKYP++IVAEGIEQEALAPVIKNKLRG LKVAAIKAPAFGERKTHYLEDIAIL
Sbjct: 266 ILNNSAKEKYPVLIVAEGIEQEALAPVIKNKLRGALKVAAIKAPAFGERKTHYLEDIAIL 325

Query: 363 TGGTVIRE 386
           TGGTVIRE
Sbjct: 326 TGGTVIRE 333


>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score =  218 bits (555), Expect = 4e-55
 Identities = 107/128 (83%), Positives = 118/128 (92%)
 Frame = +3

Query: 3   TIEKGKCTENSLEIVEGMQFDRGYLSPYFVTDRRKMTVELHNCKLLLVDKKITNAKELLN 182
           TIEKGKC ENSL+IVEGMQFDRGYLSPYFVTDR+KM VE H+CKLLLVDKKITN KE+  
Sbjct: 202 TIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLLLVDKKITNPKEMFK 261

Query: 183 MLKTAVKEKYPIVIVAEGIEQEALAPVIKNKLRGMLKVAAIKAPAFGERKTHYLEDIAIL 362
           +L  AVKEKYPIVIVAEGIEQEALAPVI+NKLRG+LK AAIKAPAFGERK+HYL+D+AIL
Sbjct: 262 ILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDLAIL 321

Query: 363 TGGTVIRE 386
           TGGTVI +
Sbjct: 322 TGGTVISD 329


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  218 bits (555), Expect = 4e-55
 Identities = 107/128 (83%), Positives = 118/128 (92%)
 Frame = +3

Query: 3   TIEKGKCTENSLEIVEGMQFDRGYLSPYFVTDRRKMTVELHNCKLLLVDKKITNAKELLN 182
           TIEKGKC ENSL+IVEGMQFDRGYLSPYFVTDR+KM VE H+CKLLLVDKKITN KE+  
Sbjct: 176 TIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLLLVDKKITNPKEMFK 235

Query: 183 MLKTAVKEKYPIVIVAEGIEQEALAPVIKNKLRGMLKVAAIKAPAFGERKTHYLEDIAIL 362
           +L  AVKEKYPIVIVAEGIEQEALAPVI+NKLRG+LK AAIKAPAFGERK+HYL+D+AIL
Sbjct: 236 ILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDLAIL 295

Query: 363 TGGTVIRE 386
           TGGTVI +
Sbjct: 296 TGGTVISD 303


>ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|222865027|gb|EEF02158.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score =  212 bits (540), Expect = 2e-53
 Identities = 103/128 (80%), Positives = 117/128 (91%)
 Frame = +3

Query: 3   TIEKGKCTENSLEIVEGMQFDRGYLSPYFVTDRRKMTVELHNCKLLLVDKKITNAKELLN 182
           TIEKG+CTEN LEIVEGMQFDRGYLSPYFVTDR++M VE HNCKLLLVDKKI NAKE+  
Sbjct: 154 TIEKGRCTENILEIVEGMQFDRGYLSPYFVTDRQRMVVEFHNCKLLLVDKKIQNAKEVFK 213

Query: 183 MLKTAVKEKYPIVIVAEGIEQEALAPVIKNKLRGMLKVAAIKAPAFGERKTHYLEDIAIL 362
           +L  AVKE YPIVIVAE ++QEALAP+I+NKL+G+LK AAIKAPAFGERK+HYL+DIAIL
Sbjct: 214 ILDNAVKEMYPIVIVAEDVDQEALAPIIRNKLKGLLKGAAIKAPAFGERKSHYLDDIAIL 273

Query: 363 TGGTVIRE 386
           TGGTVIR+
Sbjct: 274 TGGTVIRD 281