BLASTX nr result

ID: Glycyrrhiza24_contig00017168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017168
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519974.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   154   7e-36
ref|XP_003637193.1| ATP-dependent RNA helicase [Medicago truncat...   121   7e-26
ref|XP_002527091.1| dead box ATP-dependent RNA helicase, putativ...    90   2e-16
ref|XP_004159473.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    79   5e-13
ref|XP_004141005.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    76   3e-12

>ref|XP_003519974.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Glycine
           max]
          Length = 373

 Score =  154 bits (389), Expect = 7e-36
 Identities = 80/97 (82%), Positives = 87/97 (89%)
 Frame = -2

Query: 406 DEVDFMLGSGLGPEIHKIITPLQHHESKSTVKRLQTILAISTIAEVLGEESPLVKSLEQD 227
           DE D MLGSGLGPEIHKI+ PLQ  ESKS VKRLQTILAISTIAEVLGE+S +VK LE D
Sbjct: 272 DEADCMLGSGLGPEIHKILRPLQDQESKSCVKRLQTILAISTIAEVLGEQSSVVKHLECD 331

Query: 226 HAGNISAMSLEIEQAEVFHFTESLDALKKKLAEAMNS 116
           HAGNISAMSLE+EQ EVFHFTESLDAL+KK+AEAM+S
Sbjct: 332 HAGNISAMSLEMEQTEVFHFTESLDALRKKVAEAMDS 368


>ref|XP_003637193.1| ATP-dependent RNA helicase [Medicago truncatula]
           gi|355503128|gb|AES84331.1| ATP-dependent RNA helicase
           [Medicago truncatula]
          Length = 410

 Score =  121 bits (303), Expect = 7e-26
 Identities = 67/98 (68%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
 Frame = -2

Query: 406 DEVDFMLGSG-LGPEIHKIITPLQHHESKSTVKRLQTILAISTIAEVLGEESPLVKSLEQ 230
           DE D MLGS  +GPEI+KII PLQH+ESKS+VKRLQTI+AISTIAE             +
Sbjct: 325 DEADSMLGSSNIGPEINKIIRPLQHNESKSSVKRLQTIMAISTIAE-------------R 371

Query: 229 DHAGNISAMSLEIEQAEVFHFTESLDALKKKLAEAMNS 116
           DHAGNISA+S+E+E+ EVFH TESLDALKKKL EAMNS
Sbjct: 372 DHAGNISALSVEMEETEVFHLTESLDALKKKLEEAMNS 409


>ref|XP_002527091.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533514|gb|EEF35254.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 357

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/97 (47%), Positives = 70/97 (72%)
 Frame = -2

Query: 406 DEVDFMLGSGLGPEIHKIITPLQHHESKSTVKRLQTILAISTIAEVLGEESPLVKSLEQD 227
           D  D M  +G GPEI +II+ L++ +S+S  +RLQT+L   T+ EVLG +S +++ LE D
Sbjct: 257 DNADAMFDNGFGPEISRIISSLKNRKSQSNDQRLQTVLVTDTMTEVLG-KSGILERLEHD 315

Query: 226 HAGNISAMSLEIEQAEVFHFTESLDALKKKLAEAMNS 116
           +AG ++A+ L+I+Q E F   +S DALKKK+AEA++S
Sbjct: 316 NAGKVTAIVLKIDQMEAFEIIKSSDALKKKMAEAIDS 352


>ref|XP_004159473.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
           sativus]
          Length = 357

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
 Frame = -2

Query: 406 DEVDFMLGSGLGPEIHKIITPLQHHESKSTVKRLQTILAISTIAEVLGEE-SPLVKSLEQ 230
           DE+D M G G GP I KI+T +++       K+ Q+I+  ST+ +++ E+ S LVKSL  
Sbjct: 257 DELDSMFGLGFGPNIKKILTSVRNCN-----KKCQSIVVTSTLIKMMHEQRSSLVKSLRC 311

Query: 229 DHAGNISAMSLEIEQAEVFHFTESLDALKKKLAEAMNS 116
             AG I+AM LEIE+ E FH  ES DALK KLA+ + S
Sbjct: 312 GDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVES 349


>ref|XP_004141005.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
           sativus]
          Length = 357

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
 Frame = -2

Query: 406 DEVDFMLGSGLGPEIHKIITPLQHHESKSTVKRLQTILAISTIAEVLGEE-SPLVKSLEQ 230
           DE+D M   G GP I KI+T +++       K+ Q+I+  ST+ +++ E+ S LVKSL  
Sbjct: 257 DELDSMFDLGFGPNIKKILTSVRNCN-----KKCQSIVVTSTLIKMMHEQRSSLVKSLRC 311

Query: 229 DHAGNISAMSLEIEQAEVFHFTESLDALKKKLAEAMNS 116
             AG I+AM LEIE+ E FH  ES DALK KLA+ + S
Sbjct: 312 GDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVES 349


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