BLASTX nr result

ID: Glycyrrhiza24_contig00017167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017167
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519974.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   199   2e-49
ref|XP_003637193.1| ATP-dependent RNA helicase [Medicago truncat...   186   1e-45
ref|XP_004159473.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   117   1e-24
ref|XP_004141005.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   117   1e-24
ref|XP_002527091.1| dead box ATP-dependent RNA helicase, putativ...   113   2e-23

>ref|XP_003519974.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Glycine
           max]
          Length = 373

 Score =  199 bits (506), Expect = 2e-49
 Identities = 100/128 (78%), Positives = 113/128 (88%)
 Frame = +2

Query: 5   IPAILEGKSLLFSSPPQPDRTLAYLLPLIQLLRRDGELLGSNSKHPRAVVLCASEEKAAQ 184
           IPA+LEGKS+L SSP +PDRTLA+LLPLIQLLRRDG LLGSNSK+P+A+VLCA+EEK+ Q
Sbjct: 151 IPAVLEGKSVLLSSPSEPDRTLAFLLPLIQLLRRDGGLLGSNSKYPQAIVLCATEEKSEQ 210

Query: 185 CFNAAGYITHNAELKSANKCASSDNEKSNASIGLMIGTPSEILQYIEEGIVVPAELKYLV 364
           CFNAA YI HNAELKSA   AS DN +S ASIGLMIGTPSEIL+YIEEG VVPAE++YLV
Sbjct: 211 CFNAAKYIIHNAELKSAKDSASPDNGQSKASIGLMIGTPSEILEYIEEGSVVPAEIRYLV 270

Query: 365 LDEVDFML 388
           LDE D ML
Sbjct: 271 LDEADCML 278


>ref|XP_003637193.1| ATP-dependent RNA helicase [Medicago truncatula]
           gi|355503128|gb|AES84331.1| ATP-dependent RNA helicase
           [Medicago truncatula]
          Length = 410

 Score =  186 bits (473), Expect = 1e-45
 Identities = 99/124 (79%), Positives = 105/124 (84%), Gaps = 4/124 (3%)
 Frame = +2

Query: 2   VIPAILEGKSLLFSSPPQPDRTLAYLLPLIQ----LLRRDGELLGSNSKHPRAVVLCASE 169
           VIP IL+GKSLL SSP Q DRTLAYLLPLIQ    +LRRD ELLGSNSK+PRAVVLCASE
Sbjct: 121 VIPTILDGKSLLLSSPSQHDRTLAYLLPLIQVDVKMLRRDRELLGSNSKYPRAVVLCASE 180

Query: 170 EKAAQCFNAAGYITHNAELKSANKCASSDNEKSNASIGLMIGTPSEILQYIEEGIVVPAE 349
           EK  QCFNAA YI HNAE+KSA   ASSD EKSN+SIGLMIGTP EILQYIEEG +VPAE
Sbjct: 181 EKVEQCFNAARYIIHNAEVKSAKNRASSDTEKSNSSIGLMIGTPYEILQYIEEGTIVPAE 240

Query: 350 LKYL 361
           LKYL
Sbjct: 241 LKYL 244


>ref|XP_004159473.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
           sativus]
          Length = 357

 Score =  117 bits (292), Expect = 1e-24
 Identities = 63/131 (48%), Positives = 89/131 (67%), Gaps = 4/131 (3%)
 Frame = +2

Query: 5   IPAILEGKSLLFSSPPQPDRTLAYLLPLIQLLRRDGELLGSNSKHPRAVVLCASEEKAAQ 184
           IPA+LEGK+++F    +P+R LAYLLPLIQ L+RD +  G+ SKHPRA V+C + + + +
Sbjct: 132 IPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAFVMCPTAQLSEE 191

Query: 185 CFNAAGYITHNAELKSA--NKCASSDNEK--SNASIGLMIGTPSEILQYIEEGIVVPAEL 352
            F  A Y ++  +LK+   N C   + +K  S+ SIGL+IGTP EI + IE+G VV  E+
Sbjct: 192 LFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISELIEDGSVVLDEI 251

Query: 353 KYLVLDEVDFM 385
            YLV DE+D M
Sbjct: 252 NYLVFDELDSM 262


>ref|XP_004141005.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
           sativus]
          Length = 357

 Score =  117 bits (292), Expect = 1e-24
 Identities = 63/131 (48%), Positives = 89/131 (67%), Gaps = 4/131 (3%)
 Frame = +2

Query: 5   IPAILEGKSLLFSSPPQPDRTLAYLLPLIQLLRRDGELLGSNSKHPRAVVLCASEEKAAQ 184
           IPA+LEGK+++F    +P+R LAYLLPLIQ L+RD +  G+ SKHPRA V+C + + + +
Sbjct: 132 IPAVLEGKNVVFGYLDEPERALAYLLPLIQNLKRDEKRYGTRSKHPRAFVMCPTAQLSEE 191

Query: 185 CFNAAGYITHNAELKSA--NKCASSDNEK--SNASIGLMIGTPSEILQYIEEGIVVPAEL 352
            F  A Y ++  +LK+   N C   + +K  S+ SIGL+IGTP EI + IE+G VV  E+
Sbjct: 192 LFCMAKYFSNYRQLKTPRDNGCGELELQKSASDVSIGLLIGTPDEISELIEDGSVVLDEI 251

Query: 353 KYLVLDEVDFM 385
            YLV DE+D M
Sbjct: 252 NYLVFDELDSM 262


>ref|XP_002527091.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533514|gb|EEF35254.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 357

 Score =  113 bits (282), Expect = 2e-23
 Identities = 62/127 (48%), Positives = 79/127 (62%)
 Frame = +2

Query: 5   IPAILEGKSLLFSSPPQPDRTLAYLLPLIQLLRRDGELLGSNSKHPRAVVLCASEEKAAQ 184
           IPAILEGKSL+ SS     RTL+YLLPL+QLLR D  L G   K P+A+VLC +EE + +
Sbjct: 136 IPAILEGKSLVLSSNSGSGRTLSYLLPLVQLLRGDEALSGMKPKQPKAIVLCTTEELSDE 195

Query: 185 CFNAAGYITHNAELKSANKCASSDNEKSNASIGLMIGTPSEILQYIEEGIVVPAELKYLV 364
            F  A  I+  A L  +     S    S   IG++IGTP E++Q IEEG +   ++KYLV
Sbjct: 196 GFRIAKSISDFARLSRSGSDHLSPENMSKPPIGMLIGTPFEVVQQIEEGSIATDDIKYLV 255

Query: 365 LDEVDFM 385
           LD  D M
Sbjct: 256 LDNADAM 262