BLASTX nr result

ID: Glycyrrhiza24_contig00017161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017161
         (2107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   637   e-180
ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containin...   635   e-179
ref|XP_003518958.1| PREDICTED: zinc finger CCCH domain-containin...   622   e-175
ref|XP_003536892.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   581   e-163
ref|XP_002520668.1| nucleic acid binding protein, putative [Rici...   569   e-160

>ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 32-like [Glycine max]
          Length = 494

 Score =  637 bits (1642), Expect = e-180
 Identities = 294/341 (86%), Positives = 308/341 (90%), Gaps = 1/341 (0%)
 Frame = +1

Query: 1060 MELYGRNPARNGSNPGNQPEWRSPAGDTTLEESMWHLTLGSGESYPERPGVPNCVYYMRT 1239
            M+LYGR  ARNGSNP NQPEWRSP  DT LEESMWHLTLG GESYPERPGVPNCVYYMRT
Sbjct: 1    MDLYGRGQARNGSNPVNQPEWRSPGTDTGLEESMWHLTLGGGESYPERPGVPNCVYYMRT 60

Query: 1240 GSCGYGGRCRFNHPRDXXXXXXXXXXTGEYPERVGEPPCQYYLKTGTCKFGASCKFHHPK 1419
            G CGYG RCR+NHPRD          TG+YPERVGEPPCQYYLKTGTCKFGASCKFHHPK
Sbjct: 61   GVCGYGSRCRYNHPRDRAAVAAAVRVTGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPK 120

Query: 1420 HGGGSLSQAPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFY 1599
            +GGG L+QAPLNIYGYPLRPGEKECSYYLKTGQCKFGI+CKFHHPQPAGTSLP SAPQFY
Sbjct: 121  NGGGYLTQAPLNIYGYPLRPGEKECSYYLKTGQCKFGISCKFHHPQPAGTSLPTSAPQFY 180

Query: 1600 QQVQSPTVPLPDQYGGASTSLRVARPPILPGSYVQGAYGPVLLSPGVVPFPGWSPYSAPV 1779
            QQVQSPTVPLP+QYGGASTSLRVARPP+LPGSYVQGAYGPVLLSPGVV FPGWS YSAPV
Sbjct: 181  QQVQSPTVPLPEQYGGASTSLRVARPPVLPGSYVQGAYGPVLLSPGVVQFPGWSHYSAPV 240

Query: 1780 SPVLSPGAQPSVGATSLYGVTQLSSSTSAFARPYTPLPSSTVPLGNNQKEQVFPERPGEP 1959
            SPVLSPGAQP+VGATSLYGVTQLSS TSAFARPYTPL S+T P G+N K+Q FPERPGEP
Sbjct: 241  SPVLSPGAQPTVGATSLYGVTQLSSPTSAFARPYTPLSSTTGPSGSNLKDQFFPERPGEP 300

Query: 1960 ECQYYLRTGDCKFGLTCRYHHPRDR-VTQPLLSPIGLPLRP 2079
            ECQYYLRTGDCKFGL CRYHHPRD  V +PLLSP+GLPLRP
Sbjct: 301  ECQYYLRTGDCKFGLACRYHHPRDHIVARPLLSPVGLPLRP 341



 Score =  103 bits (258), Expect = 1e-19
 Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
 Frame = +1

Query: 1327 YPERVGEPPCQYYLKTGTCKFGASCKFHHPKHGGGSLSQAPLNIYGYPLRPGEKECSYYL 1506
            +PER GEP CQYYL+TG CKFG +C++HHP+     +++  L+  G PLRPG + C++YL
Sbjct: 293  FPERPGEPECQYYLRTGDCKFGLACRYHHPRDH--IVARPLLSPVGLPLRPGVQPCAFYL 350

Query: 1507 KTGQCKFGITCKFHHPQPAGTSLPASAPQFYQQVQSPTVPLP-----DQYGGASTSLRVA 1671
            + G CKFG TCKF HP           P     +  P  P P      Q   ++TS  + 
Sbjct: 351  QNGHCKFGSTCKFDHP----LGSTRYTPWVSSFIDVPVTPYPVGSLLSQLAPSTTSSEL- 405

Query: 1672 RPPILPGS 1695
            RP ++ GS
Sbjct: 406  RPELMSGS 413


>ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
            [Glycine max]
          Length = 471

 Score =  635 bits (1639), Expect = e-179
 Identities = 293/341 (85%), Positives = 309/341 (90%), Gaps = 1/341 (0%)
 Frame = +1

Query: 1060 MELYGRNPARNGSNPGNQPEWRSPAGDTTLEESMWHLTLGSGESYPERPGVPNCVYYMRT 1239
            M+LYGR+PARNG NP NQPEW SP  DT LEESMWHLTLG GESYPER GVPNCVYYMRT
Sbjct: 1    MDLYGRSPARNGPNPVNQPEWSSPGTDTALEESMWHLTLGGGESYPERSGVPNCVYYMRT 60

Query: 1240 GSCGYGGRCRFNHPRDXXXXXXXXXXTGEYPERVGEPPCQYYLKTGTCKFGASCKFHHPK 1419
            G CGYGGRCR+NHPRD          TG+YPERVGEPPCQYYLKTGTCKFGASCKFHHPK
Sbjct: 61   GVCGYGGRCRYNHPRDRAAVAAAVRATGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPK 120

Query: 1420 HGGGSLSQAPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFY 1599
            +GGG LSQAPLN+YGYPLRPGEKECSYYLKTGQCKFGI+CKFHHPQPAGTSLPASAPQFY
Sbjct: 121  NGGGYLSQAPLNVYGYPLRPGEKECSYYLKTGQCKFGISCKFHHPQPAGTSLPASAPQFY 180

Query: 1600 QQVQSPTVPLPDQYGGASTSLRVARPPILPGSYVQGAYGPVLLSPGVVPFPGWSPYSAPV 1779
            QQVQSPTVPLP+QYGGAS+SLRVARPPILPGSYVQGAYGPVLLSPGVV FPGWS YSAPV
Sbjct: 181  QQVQSPTVPLPEQYGGASSSLRVARPPILPGSYVQGAYGPVLLSPGVVQFPGWSHYSAPV 240

Query: 1780 SPVLSPGAQPSVGATSLYGVTQLSSSTSAFARPYTPLPSSTVPLGNNQKEQVFPERPGEP 1959
            SPV SPGAQP+VGATSLYGVTQLSS TSAFARPYTPLPS+T P  +N KEQ++PERPGEP
Sbjct: 241  SPVPSPGAQPAVGATSLYGVTQLSSPTSAFARPYTPLPSTTDPSRSNPKEQLYPERPGEP 300

Query: 1960 ECQYYLRTGDCKFGLTCRYHHPRDR-VTQPLLSPIGLPLRP 2079
            ECQYYLRTGDCKFGL CRYHHPRD  V +PLLSP+GLPLRP
Sbjct: 301  ECQYYLRTGDCKFGLACRYHHPRDHIVARPLLSPVGLPLRP 341



 Score =  106 bits (264), Expect = 3e-20
 Identities = 54/128 (42%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
 Frame = +1

Query: 1327 YPERVGEPPCQYYLKTGTCKFGASCKFHHPKHGGGSLSQAPLNIYGYPLRPGEKECSYYL 1506
            YPER GEP CQYYL+TG CKFG +C++HHP+     +++  L+  G PLRPG + C++YL
Sbjct: 293  YPERPGEPECQYYLRTGDCKFGLACRYHHPRDH--IVARPLLSPVGLPLRPGLQPCAFYL 350

Query: 1507 KTGQCKFGITCKFHHPQPAGTSLPASAPQFYQQVQSPTVPLP-----DQYGGASTSLRVA 1671
            + G CKFG TCKF HP  +    P+++      +  P  P P      Q   ++TS  + 
Sbjct: 351  QNGHCKFGSTCKFDHPLGSMRYSPSAS----SLIDVPVTPYPVGSLLSQLAPSTTSSDL- 405

Query: 1672 RPPILPGS 1695
            RP ++ GS
Sbjct: 406  RPELMSGS 413


>ref|XP_003518958.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
            [Glycine max]
          Length = 339

 Score =  622 bits (1603), Expect = e-175
 Identities = 288/341 (84%), Positives = 304/341 (89%)
 Frame = +1

Query: 1060 MELYGRNPARNGSNPGNQPEWRSPAGDTTLEESMWHLTLGSGESYPERPGVPNCVYYMRT 1239
            M+LYGR PARNGSNP NQPEW +   DT LEESMWHLTLG  ESYPERPGVPNCVYYMRT
Sbjct: 1    MDLYGRAPARNGSNPLNQPEWGT---DTALEESMWHLTLGGVESYPERPGVPNCVYYMRT 57

Query: 1240 GSCGYGGRCRFNHPRDXXXXXXXXXXTGEYPERVGEPPCQYYLKTGTCKFGASCKFHHPK 1419
            G CGYG RCRFNHPRD          TG+YPERVGEPPCQYYLKTGTCKFGASCKFHHPK
Sbjct: 58   GVCGYGDRCRFNHPRDRAAVAAAVRATGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPK 117

Query: 1420 HGGGSLSQAPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFY 1599
            +GGG LSQAPLNIYGYPLR GEKECSYYLKTGQCKFGI+CKFHHPQPAGTSLP SAPQFY
Sbjct: 118  NGGGYLSQAPLNIYGYPLRLGEKECSYYLKTGQCKFGISCKFHHPQPAGTSLPTSAPQFY 177

Query: 1600 QQVQSPTVPLPDQYGGASTSLRVARPPILPGSYVQGAYGPVLLSPGVVPFPGWSPYSAPV 1779
            QQVQSPTVPLP+QYGGASTSLRVARPP+LPGSYVQGAYGPVLLSPGVV FPGWS YSAPV
Sbjct: 178  QQVQSPTVPLPEQYGGASTSLRVARPPVLPGSYVQGAYGPVLLSPGVVQFPGWSHYSAPV 237

Query: 1780 SPVLSPGAQPSVGATSLYGVTQLSSSTSAFARPYTPLPSSTVPLGNNQKEQVFPERPGEP 1959
            SPVLSPG QP+VGATSLYGVTQLSS TSAFARPYTPL S+T P G++ K++ FPERPGEP
Sbjct: 238  SPVLSPGTQPAVGATSLYGVTQLSSPTSAFARPYTPLSSTTGPSGSSLKDRFFPERPGEP 297

Query: 1960 ECQYYLRTGDCKFGLTCRYHHPRDRVTQPLLSPIGLPLRPL 2082
            ECQYYLRTGDCKFGL CRYHHPRD +  PLLSP+GLPLRP+
Sbjct: 298  ECQYYLRTGDCKFGLACRYHHPRDHIVAPLLSPVGLPLRPV 338


>ref|XP_003536892.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 32-like [Glycine max]
          Length = 473

 Score =  581 bits (1497), Expect = e-163
 Identities = 274/342 (80%), Positives = 293/342 (85%), Gaps = 2/342 (0%)
 Frame = +1

Query: 1060 MELYGRNPARNGSNPGNQPEWRSPAGDTTLEESMWHLTLGSG-ESYPERPGVPNCVYYMR 1236
            M+LYGR PARN  NP NQPEWRSP  DT LEESMWHLTLG G ESYPERPGVPNCVYYMR
Sbjct: 1    MDLYGRGPARNVHNPVNQPEWRSPGTDTGLEESMWHLTLGGGGESYPERPGVPNCVYYMR 60

Query: 1237 TGSCGYGGRCRFNHPRDXXXXXXXXXXTGEYPERVGEPPCQYYLKTGTCKFGASCKFHHP 1416
            TG CGYGGRCR+NHP D          TG+YPER+GEPPCQYYLKTGTCKFGASCKFHHP
Sbjct: 61   TGVCGYGGRCRYNHPHDRAAVVAAVRVTGDYPERLGEPPCQYYLKTGTCKFGASCKFHHP 120

Query: 1417 KHGGGSLSQAPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQF 1596
            K+GG  LSQAPLN+YGYPLR  EKECSYYLKTGQCK+GI+CKFHHPQPAGTSLPASA QF
Sbjct: 121  KNGGEYLSQAPLNVYGYPLRSDEKECSYYLKTGQCKYGISCKFHHPQPAGTSLPASAAQF 180

Query: 1597 YQQVQSPTVPLPDQYGGASTSLRVARPPILPGSYVQGAYGPVLLSPGVVPFPGWSPYSAP 1776
            YQQVQSPTVPLP+QY GAS+SLRVARPPILPGSYVQGAYGPV LSPGVV FPGW+ YS  
Sbjct: 181  YQQVQSPTVPLPEQYVGASSSLRVARPPILPGSYVQGAYGPVFLSPGVVQFPGWNHYSVR 240

Query: 1777 VSPVLSPGAQPSVGATSLYGVTQLSSSTSAFARPYTPLPSSTVPLGNNQKEQVFPERPGE 1956
                L PG QP VGATSLYGVTQLSS TSAFARPYT LPSST   G+N KEQ++P+RPGE
Sbjct: 241  GMCAL-PGTQPGVGATSLYGVTQLSSPTSAFARPYTLLPSSTGLSGSNLKEQLYPKRPGE 299

Query: 1957 PECQYYLRTGDCKFGLTCRYHHPRDR-VTQPLLSPIGLPLRP 2079
            P+CQYYLRTGDCKFGL C+YHHP+D  V QPLLSP+GLPLRP
Sbjct: 300  PDCQYYLRTGDCKFGLACQYHHPQDHVVAQPLLSPVGLPLRP 341



 Score = 99.4 bits (246), Expect = 3e-18
 Identities = 42/75 (56%), Positives = 55/75 (73%)
 Frame = +1

Query: 1327 YPERVGEPPCQYYLKTGTCKFGASCKFHHPKHGGGSLSQAPLNIYGYPLRPGEKECSYYL 1506
            YP+R GEP CQYYL+TG CKFG +C++HHP+     ++Q  L+  G PLRPG + C++YL
Sbjct: 293  YPKRPGEPDCQYYLRTGDCKFGLACQYHHPQDH--VVAQPLLSPVGLPLRPGLQPCAFYL 350

Query: 1507 KTGQCKFGITCKFHH 1551
            + G CKFG TCKF H
Sbjct: 351  QNGHCKFGSTCKFDH 365


>ref|XP_002520668.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223540053|gb|EEF41630.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 478

 Score =  569 bits (1467), Expect = e-160
 Identities = 270/351 (76%), Positives = 289/351 (82%), Gaps = 11/351 (3%)
 Frame = +1

Query: 1060 MELYGRNPARNGSNPGNQPEWRSPAGDTTLEESMWHLTL---GSGESYPERPGVPNCVYY 1230
            M+LYGR+ ARNG   G QPEW S   +T LEESMW L L   G GESYPERPGVP+CVYY
Sbjct: 1    MDLYGRSQARNGLQSGQQPEWSSGGAETGLEESMWRLGLNNSGGGESYPERPGVPDCVYY 60

Query: 1231 MRTGSCGYGGRCRFNHPRDXXXXXXXXXXTGEYPERVGEPPCQYYLKTGTCKFGASCKFH 1410
            MRTG CGYG RCR+NHPR+          TGEYPER+GEP C++YLKTGTCKFGASCKFH
Sbjct: 61   MRTGFCGYGNRCRYNHPRNRAAVEAAVRATGEYPERIGEPSCEFYLKTGTCKFGASCKFH 120

Query: 1411 HPKHGGGSLSQAPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAP 1590
            HPKHGGGSLS  PLN +GYPLRPGE ECSYYLKTGQCKFGITCKFHHPQPAG+SLP SAP
Sbjct: 121  HPKHGGGSLSHVPLNTHGYPLRPGENECSYYLKTGQCKFGITCKFHHPQPAGSSLPESAP 180

Query: 1591 QFYQQVQSPTVPLPDQYGGASTSLRVARPPILPGSYVQGAYGPVLLSPGVVPFPGWSPYS 1770
            QFYQ VQSP++P+PDQYGGAS SLRV RPP+LPGSYVQGAYGPVL SPGVVP PGWSPYS
Sbjct: 181  QFYQPVQSPSIPIPDQYGGASASLRV-RPPLLPGSYVQGAYGPVLFSPGVVPIPGWSPYS 239

Query: 1771 APVSPVLSPGAQPSVGATSLYGVTQLSSSTSAFARPYTPLPSS-----TVPLGNNQKEQV 1935
            APVSPVLSP AQP+VGATSLYGVTQLSSST A A PY P PSS       PL   QKEQ 
Sbjct: 240  APVSPVLSPSAQPAVGATSLYGVTQLSSSTPALAGPY-PSPSSAAAAAAAPLSGTQKEQT 298

Query: 1936 FPERPGEPECQYYLRTGDCKFGLTCRYHHPRDRV---TQPLLSPIGLPLRP 2079
            FPERPGEPECQYYLRTGDCKFG +CRYHHPRDRV   T  +LSP+GLPLRP
Sbjct: 299  FPERPGEPECQYYLRTGDCKFGSSCRYHHPRDRVVPRTNCVLSPLGLPLRP 349



 Score =  110 bits (274), Expect = 2e-21
 Identities = 70/200 (35%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
 Frame = +1

Query: 1327 YPERVGEPPCQYYLKTGTCKFGASCKFHHPKHGGGSLSQAPLNIYGYPLRPGEKECSYYL 1506
            +PER GEP CQYYL+TG CKFG+SC++HHP+      +   L+  G PLRPG + C++YL
Sbjct: 299  FPERPGEPECQYYLRTGDCKFGSSCRYHHPRDRVVPRTNCVLSPLGLPLRPGAQHCTFYL 358

Query: 1507 KTGQCKFGITCKFHHPQPAGTSLPASAPQFYQQVQSPTVPLPDQYGGASTSLRVARPPIL 1686
            + G CKFG TCKF HP       P+++      +  P  P P        SL     P  
Sbjct: 359  RNGHCKFGSTCKFDHPMETMRYSPSAS----SLIDMPVAPYP------VGSLLATLAPSS 408

Query: 1687 PGSYVQGAYGPVLLSPGVVPFPGWSPYSAPVSPVLSPGAQPSVGATSLYGVTQLSSSTSA 1866
              S + G                       + P LS    PS G TS  GV  + S T +
Sbjct: 409  SSSELIG--------------------GTKIDPYLS--RIPSSGNTSSSGVGLMFSQTGS 446

Query: 1867 FARPYTPLPS-STVPLGNNQ 1923
                   LPS + VPL +++
Sbjct: 447  VPLSELQLPSQNPVPLTSSR 466


Top