BLASTX nr result

ID: Glycyrrhiza24_contig00017115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017115
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40774.1| unknown [Lotus japonicus]                              184   2e-44
ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing fac...   181   2e-43
ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|2...   179   1e-42
ref|XP_002534324.1| arginine/serine-rich splicing factor, putati...   177   3e-42
ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing fac...   175   1e-41

>gb|AFK40774.1| unknown [Lotus japonicus]
          Length = 181

 Score =  184 bits (468), Expect = 2e-44
 Identities = 88/105 (83%), Positives = 91/105 (86%), Gaps = 2/105 (1%)
 Frame = +1

Query: 115 MSRVYIGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFIEFDDRRDALDAIHALDG 294
           MSRVY+GNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAF+EFDD+RDALDAIHALDG
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDG 60

Query: 295 KNGWRVELSHNSK--XXXXXXXXXXXXEDLKCYECGEPGHFAREC 423
           KNGWRVELSHNSK              EDLKCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGGRGGGRGRGGEDLKCYECGEPGHFAREC 105


>ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
           max]
          Length = 176

 Score =  181 bits (460), Expect = 2e-43
 Identities = 87/103 (84%), Positives = 89/103 (86%)
 Frame = +1

Query: 115 MSRVYIGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFIEFDDRRDALDAIHALDG 294
           MSRVY+GNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAFIEFDDRRDALDAI ALDG
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 295 KNGWRVELSHNSKXXXXXXXXXXXXEDLKCYECGEPGHFAREC 423
           KNGWRVELSHNSK            ED KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSK-GGGRGGRGRGGEDTKCYECGEPGHFAREC 102


>ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|222862262|gb|EEE99768.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  179 bits (453), Expect = 1e-42
 Identities = 85/106 (80%), Positives = 89/106 (83%), Gaps = 3/106 (2%)
 Frame = +1

Query: 115 MSRVYIGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFIEFDDRRDALDAIHALDG 294
           MSRVY+GNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAF+EFDDRRDA+DAI ALDG
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDG 60

Query: 295 KNGWRVELSHNSK---XXXXXXXXXXXXEDLKCYECGEPGHFAREC 423
           KNGWRVELSHNSK               ED KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGRSGDGHGRGGGEDSKCYECGEPGHFAREC 106


>ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223525498|gb|EEF28060.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 184

 Score =  177 bits (450), Expect = 3e-42
 Identities = 84/109 (77%), Positives = 90/109 (82%), Gaps = 6/109 (5%)
 Frame = +1

Query: 115 MSRVYIGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFIEFDDRRDALDAIHALDG 294
           M+RVY+GNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAF+EFDDRRDA+DAI ALDG
Sbjct: 1   MARVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60

Query: 295 KNGWRVELSHNSK------XXXXXXXXXXXXEDLKCYECGEPGHFAREC 423
           KNGWRVELSHNSK                  ED+KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGRGGGSGGGGRGRGGEDMKCYECGEPGHFAREC 109


>ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
           sativus]
          Length = 188

 Score =  175 bits (444), Expect = 1e-41
 Identities = 85/112 (75%), Positives = 90/112 (80%), Gaps = 9/112 (8%)
 Frame = +1

Query: 115 MSRVYIGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFIEFDDRRDALDAIHALDG 294
           M+RVYIGNLDPRV+ERDLEDEFR++GVLRSVWVARRPPGYAFIEFDDRRDALDAI ALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 295 KNGWRVELSHNSK---------XXXXXXXXXXXXEDLKCYECGEPGHFAREC 423
           KNGWRVELSHNSK                     +DLKCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGDDLKCYECGEPGHFAREC 112


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