BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017113
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35
emb|CBI25753.3| unnamed protein product [Vitis vinifera]              144   6e-33
ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32

>ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 705

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/118 (69%), Positives = 94/118 (79%)
 Frame = +2

Query: 2   TQWSLHLKKLSVGAAMIALHVWINDLSKTXXXXXXXXXXXXINTGRGKHKHSSKGLASVF 181
           TQWSLHLKKLSVGAA+ ALHVWINDLSK             +NTG+GKHK+S KGLASVF
Sbjct: 587 TQWSLHLKKLSVGAAITALHVWINDLSKALESWEDLPPLLGVNTGQGKHKYSDKGLASVF 646

Query: 182 ESHLKELNAPFREAPDKAGWFLVKKEAAKTWLQSRGSTETVAALDSPVLGAPTMALHF 355
           ESHL+ELNAPF +APDKAGWFLV KEAAK+WL+SRGS ET+  L+S V GA T+AL +
Sbjct: 647 ESHLRELNAPFHQAPDKAGWFLVTKEAAKSWLESRGSAETIDDLNSQVSGASTVALQY 704


>ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 693

 Score =  159 bits (402), Expect = 2e-37
 Identities = 81/116 (69%), Positives = 91/116 (78%)
 Frame = +2

Query: 2   TQWSLHLKKLSVGAAMIALHVWINDLSKTXXXXXXXXXXXXINTGRGKHKHSSKGLASVF 181
           TQWSLHLK+LSVGAAM ALHVWIN+LSK             INTG+GKHK+S KGLASVF
Sbjct: 580 TQWSLHLKELSVGAAMTALHVWINELSKALESGEDLPPLLGINTGQGKHKYSDKGLASVF 639

Query: 182 ESHLKELNAPFREAPDKAGWFLVKKEAAKTWLQSRGSTETVAALDSPVLGAPTMAL 349
           ESHLKELNAPF E+  KAGWFLV K AAK+WL+SR STE++A L+S VLG PTM L
Sbjct: 640 ESHLKELNAPFHES--KAGWFLVTKAAAKSWLESRDSTESIAGLNSLVLGVPTMVL 693


>ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 692

 Score =  153 bits (386), Expect = 2e-35
 Identities = 80/116 (68%), Positives = 88/116 (75%)
 Frame = +2

Query: 2   TQWSLHLKKLSVGAAMIALHVWINDLSKTXXXXXXXXXXXXINTGRGKHKHSSKGLASVF 181
           TQWSLHLK+LSVGAAM ALHVWINDLS+             INTG+GKHK+S KGLASVF
Sbjct: 579 TQWSLHLKELSVGAAMTALHVWINDLSEALESGEDLPPLLGINTGQGKHKYSDKGLASVF 638

Query: 182 ESHLKELNAPFREAPDKAGWFLVKKEAAKTWLQSRGSTETVAALDSPVLGAPTMAL 349
           ES LKELNAPF EA  KAGWFLV K AAK WL+SR STE++A L+  VL  PTMAL
Sbjct: 639 ESRLKELNAPFHEA--KAGWFLVTKAAAKLWLESRDSTESIAGLNFLVLDVPTMAL 692


>emb|CBI25753.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  144 bits (364), Expect = 6e-33
 Identities = 78/141 (55%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
 Frame = +2

Query: 2   TQWSLHLKKLSVGAAMIALHVWINDLSKTXXXXXXXXXXXXINTGRGKHKHSSKGLASVF 181
           TQWSLHLK LS+GAA+ ALH+W+NDLSK             INTG GKHK+S KGLASVF
Sbjct: 566 TQWSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHKYSDKGLASVF 625

Query: 182 ESHLKELNAPFREAPDKAGWFLVKKEAAKTWLQSRGSTETVAALDSPVLGAPTMALHF*Q 361
           ESHLKELNAPF EAPDK GWFL  K AA +WL+SR + E VA L+   LG      H   
Sbjct: 626 ESHLKELNAPFHEAPDKVGWFLTTKVAATSWLESRSAPELVALLN---LG------HVFH 676

Query: 362 CFREPCAML--FLCIFLFFFY 418
              +  A+   FL ++LF F+
Sbjct: 677 FLLQVVAIFLGFLMLYLFIFF 697


>ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Vitis vinifera]
          Length = 701

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/102 (66%), Positives = 76/102 (74%)
 Frame = +2

Query: 2   TQWSLHLKKLSVGAAMIALHVWINDLSKTXXXXXXXXXXXXINTGRGKHKHSSKGLASVF 181
           TQWSLHLK LS+GAA+ ALH+W+NDLSK             INTG GKHK+S KGLASVF
Sbjct: 599 TQWSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHKYSDKGLASVF 658

Query: 182 ESHLKELNAPFREAPDKAGWFLVKKEAAKTWLQSRGSTETVA 307
           ESHLKELNAPF EAPDK GWFL  K AA +WL+SR + E VA
Sbjct: 659 ESHLKELNAPFHEAPDKVGWFLTTKVAATSWLESRSAPELVA 700