BLASTX nr result

ID: Glycyrrhiza24_contig00017107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017107
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated...   145   4e-33
ref|XP_003545735.1| PREDICTED: U3 small nucleolar RNA-associated...   144   6e-33
emb|CBI17936.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated...   139   2e-31
ref|XP_002520985.1| nucleotide binding protein, putative [Ricinu...   137   7e-31

>ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
           [Glycine max]
          Length = 551

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   QILAICSGMKKSSLKLIHIPSYTVFSNWPPPNTSLHYPRCIDFSPGGGFMAVGSASGKVL 182
           QILAICSGMKKSSLKLIHIPSY+VFSNWPP NT+LHYPRCIDFSPGGGFMAVG+ASGKVL
Sbjct: 482 QILAICSGMKKSSLKLIHIPSYSVFSNWPPSNTNLHYPRCIDFSPGGGFMAVGNASGKVL 541

Query: 183 LYKLHHYQHA 212
           LYKLHHYQHA
Sbjct: 542 LYKLHHYQHA 551


>ref|XP_003545735.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
           [Glycine max]
          Length = 553

 Score =  144 bits (364), Expect = 6e-33
 Identities = 66/70 (94%), Positives = 68/70 (97%)
 Frame = +3

Query: 3   QILAICSGMKKSSLKLIHIPSYTVFSNWPPPNTSLHYPRCIDFSPGGGFMAVGSASGKVL 182
           QILAICSGMKKSSLKLIHIPSY+VFSNWPP NTSLHYPRCIDFSPGGGFM VG+ASGKVL
Sbjct: 484 QILAICSGMKKSSLKLIHIPSYSVFSNWPPSNTSLHYPRCIDFSPGGGFMVVGNASGKVL 543

Query: 183 LYKLHHYQHA 212
           LYKLHHYQHA
Sbjct: 544 LYKLHHYQHA 553


>emb|CBI17936.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/70 (90%), Positives = 67/70 (95%)
 Frame = +3

Query: 3   QILAICSGMKKSSLKLIHIPSYTVFSNWPPPNTSLHYPRCIDFSPGGGFMAVGSASGKVL 182
           QILAI S MKK+SLKLIHIPSYTVFSNWPPPN +LHYPRC+DFSPGGGFMAVGSA+GKVL
Sbjct: 522 QILAISSSMKKNSLKLIHIPSYTVFSNWPPPNRTLHYPRCLDFSPGGGFMAVGSAAGKVL 581

Query: 183 LYKLHHYQHA 212
           LYKLHHYQHA
Sbjct: 582 LYKLHHYQHA 591


>ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
           [Vitis vinifera]
          Length = 568

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/70 (90%), Positives = 67/70 (95%)
 Frame = +3

Query: 3   QILAICSGMKKSSLKLIHIPSYTVFSNWPPPNTSLHYPRCIDFSPGGGFMAVGSASGKVL 182
           QILAI S MKK+SLKLIHIPSYTVFSNWPPPN +LHYPRC+DFSPGGGFMAVGSA+GKVL
Sbjct: 499 QILAISSSMKKNSLKLIHIPSYTVFSNWPPPNRTLHYPRCLDFSPGGGFMAVGSAAGKVL 558

Query: 183 LYKLHHYQHA 212
           LYKLHHYQHA
Sbjct: 559 LYKLHHYQHA 568


>ref|XP_002520985.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223539822|gb|EEF41402.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 566

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/70 (87%), Positives = 68/70 (97%)
 Frame = +3

Query: 3   QILAICSGMKKSSLKLIHIPSYTVFSNWPPPNTSLHYPRCIDFSPGGGFMAVGSASGKVL 182
           QILAICS MKK+SLKLIH+PSYTVFSNWPP NT+LH+PRC+DFSPGGGFMAVG+A+GKVL
Sbjct: 497 QILAICSHMKKNSLKLIHLPSYTVFSNWPPGNTTLHFPRCLDFSPGGGFMAVGNAAGKVL 556

Query: 183 LYKLHHYQHA 212
           LYKLHHYQHA
Sbjct: 557 LYKLHHYQHA 566


Top