BLASTX nr result

ID: Glycyrrhiza24_contig00017106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017106
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated...   155   3e-36
ref|XP_003545735.1| PREDICTED: U3 small nucleolar RNA-associated...   155   4e-36
ref|XP_003597727.1| U3 small nucleolar RNA-associated protein-li...   149   2e-34
ref|XP_003593289.1| U3 small nucleolar RNA-associated protein-li...   149   3e-34
gb|AFK45442.1| unknown [Medicago truncatula]                          147   1e-33

>ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
           [Glycine max]
          Length = 551

 Score =  155 bits (392), Expect = 3e-36
 Identities = 71/75 (94%), Positives = 73/75 (97%)
 Frame = -2

Query: 357 FNHDSQILAICSRMKKSSLKLIHIPSYTVFSNWPPPNTSLHYPRCIDFSPGGGFMAVGNA 178
           FNHDSQILAICS MKKSSLKLIHIPSY+VFSNWPP NT+LHYPRCIDFSPGGGFMAVGNA
Sbjct: 477 FNHDSQILAICSGMKKSSLKLIHIPSYSVFSNWPPSNTNLHYPRCIDFSPGGGFMAVGNA 536

Query: 177 SGKVLLYKLHHYQHA 133
           SGKVLLYKLHHYQHA
Sbjct: 537 SGKVLLYKLHHYQHA 551


>ref|XP_003545735.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
           [Glycine max]
          Length = 553

 Score =  155 bits (391), Expect = 4e-36
 Identities = 71/75 (94%), Positives = 72/75 (96%)
 Frame = -2

Query: 357 FNHDSQILAICSRMKKSSLKLIHIPSYTVFSNWPPPNTSLHYPRCIDFSPGGGFMAVGNA 178
           FNHDSQILAICS MKKSSLKLIHIPSY+VFSNWPP NTSLHYPRCIDFSPGGGFM VGNA
Sbjct: 479 FNHDSQILAICSGMKKSSLKLIHIPSYSVFSNWPPSNTSLHYPRCIDFSPGGGFMVVGNA 538

Query: 177 SGKVLLYKLHHYQHA 133
           SGKVLLYKLHHYQHA
Sbjct: 539 SGKVLLYKLHHYQHA 553


>ref|XP_003597727.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|87240437|gb|ABD32295.1| WD40-like
           [Medicago truncatula] gi|217074444|gb|ACJ85582.1|
           unknown [Medicago truncatula]
           gi|355486775|gb|AES67978.1| U3 small nucleolar
           RNA-associated protein-like protein [Medicago
           truncatula] gi|388499470|gb|AFK37801.1| unknown
           [Medicago truncatula]
          Length = 555

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/75 (92%), Positives = 69/75 (92%)
 Frame = -2

Query: 357 FNHDSQILAICSRMKKSSLKLIHIPSYTVFSNWPPPNTSLHYPRCIDFSPGGGFMAVGNA 178
           FNHDSQILAICSR K SSLKLIHIPSYTVFSNWP  N SLHYPRCIDFSPGGGFMAVGNA
Sbjct: 481 FNHDSQILAICSRAKNSSLKLIHIPSYTVFSNWPRSNASLHYPRCIDFSPGGGFMAVGNA 540

Query: 177 SGKVLLYKLHHYQHA 133
           SGKVLLYKLHHY HA
Sbjct: 541 SGKVLLYKLHHYHHA 555


>ref|XP_003593289.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|355482337|gb|AES63540.1| U3 small
           nucleolar RNA-associated protein-like protein [Medicago
           truncatula]
          Length = 555

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/75 (90%), Positives = 69/75 (92%)
 Frame = -2

Query: 357 FNHDSQILAICSRMKKSSLKLIHIPSYTVFSNWPPPNTSLHYPRCIDFSPGGGFMAVGNA 178
           FNHDSQILAICSR K SSLKL+HIPSYTVFSNWP  N SLHYPRCIDFSPGGGFMAVGNA
Sbjct: 481 FNHDSQILAICSRAKNSSLKLVHIPSYTVFSNWPRSNASLHYPRCIDFSPGGGFMAVGNA 540

Query: 177 SGKVLLYKLHHYQHA 133
           SGKVLLYKLHHY HA
Sbjct: 541 SGKVLLYKLHHYHHA 555


>gb|AFK45442.1| unknown [Medicago truncatula]
          Length = 555

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/75 (89%), Positives = 68/75 (90%)
 Frame = -2

Query: 357 FNHDSQILAICSRMKKSSLKLIHIPSYTVFSNWPPPNTSLHYPRCIDFSPGGGFMAVGNA 178
           FNHD QILAICSR K SSLKL+HIPSYTVFSNWP  N SLHYPRCIDFSPGGGFMAVGNA
Sbjct: 481 FNHDPQILAICSRAKNSSLKLVHIPSYTVFSNWPRSNASLHYPRCIDFSPGGGFMAVGNA 540

Query: 177 SGKVLLYKLHHYQHA 133
           SGKVLLYKLHHY HA
Sbjct: 541 SGKVLLYKLHHYHHA 555


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