BLASTX nr result
ID: Glycyrrhiza24_contig00017095
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00017095 (473 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PAR... 237 6e-61 ref|XP_003622727.1| Poly(A)-specific ribonuclease PARN-like prot... 217 7e-55 ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi... 184 8e-45 ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2... 182 2e-44 gb|ABK95700.1| unknown [Populus trichocarpa] 182 2e-44 >ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max] Length = 619 Score = 237 bits (605), Expect = 6e-61 Identities = 116/157 (73%), Positives = 132/157 (84%) Frame = +3 Query: 3 RSRIKHWRKRSNNSGTNTSKDEELINSLRSIVLGREQFRSRPCLTIDVCSERQVQLILEM 182 RS++K+WR+ +S TN S+DEEL+NSLR+IVLG EQFRSRPC+T+DVCSERQVQLILEM Sbjct: 195 RSKVKYWRESCKSSDTNKSRDEELVNSLRNIVLGNEQFRSRPCMTVDVCSERQVQLILEM 254 Query: 183 LVDSSDDFLPLLVPSKSGTTQAVRIVLANSKEDKDXXXXXXXXXXXXXXKKIRGFREVID 362 ++D SDD LPL +P+KSGT AVRIVLANSKEDKD KKIRGFREVID Sbjct: 255 VLDYSDDLLPLPIPTKSGTIHAVRIVLANSKEDKDLLERELRNLEEEESKKIRGFREVID 314 Query: 363 LISASQRPVISHNCLNDCTLIHSKFIAPLPPEVDEFV 473 LISASQ+PVISHNCLNDCTLIHSKFIAPLPPE+DEFV Sbjct: 315 LISASQKPVISHNCLNDCTLIHSKFIAPLPPEIDEFV 351 >ref|XP_003622727.1| Poly(A)-specific ribonuclease PARN-like protein [Medicago truncatula] gi|355497742|gb|AES78945.1| Poly(A)-specific ribonuclease PARN-like protein [Medicago truncatula] Length = 513 Score = 217 bits (553), Expect = 7e-55 Identities = 113/184 (61%), Positives = 128/184 (69%), Gaps = 27/184 (14%) Frame = +3 Query: 3 RSRIKHWRKRSNNSGTNTSKD---------------------------EELINSLRSIVL 101 RSRIKHWR NSGT TSKD +ELINS+R+I+ Sbjct: 63 RSRIKHWRNTCKNSGTKTSKDGKKIFSKFCTMRFFLGSPFILYHSFCADELINSIRNIIS 122 Query: 102 GREQFRSRPCLTIDVCSERQVQLILEMLVDSSDDFLPLLVPSKSGTTQAVRIVLANSKED 281 G EQF+ RPCL +DVCS+RQVQLIL+M+VD SDD LPL++PSK GTTQAVR+VL S+ED Sbjct: 123 GSEQFKLRPCLNVDVCSDRQVQLILQMVVDFSDDLLPLVIPSKGGTTQAVRVVLTKSRED 182 Query: 282 KDXXXXXXXXXXXXXXKKIRGFREVIDLISASQRPVISHNCLNDCTLIHSKFIAPLPPEV 461 K+ KKIRGFREVIDLISASQ+PVISHNCLNDCTLIHSKFIAPLP EV Sbjct: 183 KEVLERELRSLEEEESKKIRGFREVIDLISASQKPVISHNCLNDCTLIHSKFIAPLPSEV 242 Query: 462 DEFV 473 DEFV Sbjct: 243 DEFV 246 >ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi|223533357|gb|EEF35108.1| ribonuclease, putative [Ricinus communis] Length = 624 Score = 184 bits (466), Expect = 8e-45 Identities = 91/157 (57%), Positives = 117/157 (74%), Gaps = 1/157 (0%) Frame = +3 Query: 3 RSRIKHWRKRSNNSGTNTSK-DEELINSLRSIVLGREQFRSRPCLTIDVCSERQVQLILE 179 RSR+K+W+ N+ T+TS DE L+ SLR +VLG E++ SRPC+ IDVCSERQV L++E Sbjct: 203 RSRVKNWK----NACTDTSSTDEALVKSLRKLVLGLEEYNSRPCINIDVCSERQVHLVIE 258 Query: 180 MLVDSSDDFLPLLVPSKSGTTQAVRIVLANSKEDKDXXXXXXXXXXXXXXKKIRGFREVI 359 ML + +DD +PL+VP+K G TQAVR+VL +SKED+D KKIRGFREVI Sbjct: 259 MLQEFADDLVPLIVPAKGGGTQAVRVVLTSSKEDRDLLQMELQNLEDEQNKKIRGFREVI 318 Query: 360 DLISASQRPVISHNCLNDCTLIHSKFIAPLPPEVDEF 470 DLIS S++PV+SHN LND IHSKF+APLPP ++EF Sbjct: 319 DLISGSEKPVVSHNSLNDLAFIHSKFLAPLPPSMEEF 355 >ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1| predicted protein [Populus trichocarpa] Length = 626 Score = 182 bits (463), Expect = 2e-44 Identities = 89/160 (55%), Positives = 115/160 (71%), Gaps = 3/160 (1%) Frame = +3 Query: 3 RSRIKHWRKRSNNSGTNTSKDE---ELINSLRSIVLGREQFRSRPCLTIDVCSERQVQLI 173 +S IK+W+K + T ++ L+ SLR +VLG E++ SRPC+ IDVCSERQ QL+ Sbjct: 201 KSHIKNWKKACKETSTRKEGNQIQDALVRSLRKLVLGNEEYDSRPCMNIDVCSERQAQLV 260 Query: 174 LEMLVDSSDDFLPLLVPSKSGTTQAVRIVLANSKEDKDXXXXXXXXXXXXXXKKIRGFRE 353 +EML + +DD +PL++P+K G QAVR+VL +SKEDKD KK+RGFRE Sbjct: 261 VEMLQEFADDVVPLIIPAKGGAMQAVRVVLTSSKEDKDLLQGKLQNDEQELKKKVRGFRE 320 Query: 354 VIDLISASQRPVISHNCLNDCTLIHSKFIAPLPPEVDEFV 473 VIDLISASQ+PV+SH LND T+IHSKFIAPLPP VDEF+ Sbjct: 321 VIDLISASQKPVVSHGSLNDLTVIHSKFIAPLPPTVDEFM 360 >gb|ABK95700.1| unknown [Populus trichocarpa] Length = 454 Score = 182 bits (463), Expect = 2e-44 Identities = 89/160 (55%), Positives = 115/160 (71%), Gaps = 3/160 (1%) Frame = +3 Query: 3 RSRIKHWRKRSNNSGTNTSKDE---ELINSLRSIVLGREQFRSRPCLTIDVCSERQVQLI 173 +S IK+W+K + T ++ L+ SLR +VLG E++ SRPC+ IDVCSERQ QL+ Sbjct: 51 KSHIKNWKKACKETSTRKEGNQIQDALVRSLRKLVLGNEEYDSRPCMNIDVCSERQAQLV 110 Query: 174 LEMLVDSSDDFLPLLVPSKSGTTQAVRIVLANSKEDKDXXXXXXXXXXXXXXKKIRGFRE 353 +EML + +DD +PL++P+K G QAVR+VL +SKEDKD KK+RGFRE Sbjct: 111 VEMLQEFADDVVPLIIPAKGGAMQAVRVVLTSSKEDKDLLQGKLQNDEQELKKKVRGFRE 170 Query: 354 VIDLISASQRPVISHNCLNDCTLIHSKFIAPLPPEVDEFV 473 VIDLISASQ+PV+SH LND T+IHSKFIAPLPP VDEF+ Sbjct: 171 VIDLISASQKPVVSHGSLNDLTVIHSKFIAPLPPTVDEFM 210