BLASTX nr result

ID: Glycyrrhiza24_contig00017095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017095
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PAR...   237   6e-61
ref|XP_003622727.1| Poly(A)-specific ribonuclease PARN-like prot...   217   7e-55
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   184   8e-45
ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
gb|ABK95700.1| unknown [Populus trichocarpa]                          182   2e-44

>ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 619

 Score =  237 bits (605), Expect = 6e-61
 Identities = 116/157 (73%), Positives = 132/157 (84%)
 Frame = +3

Query: 3   RSRIKHWRKRSNNSGTNTSKDEELINSLRSIVLGREQFRSRPCLTIDVCSERQVQLILEM 182
           RS++K+WR+   +S TN S+DEEL+NSLR+IVLG EQFRSRPC+T+DVCSERQVQLILEM
Sbjct: 195 RSKVKYWRESCKSSDTNKSRDEELVNSLRNIVLGNEQFRSRPCMTVDVCSERQVQLILEM 254

Query: 183 LVDSSDDFLPLLVPSKSGTTQAVRIVLANSKEDKDXXXXXXXXXXXXXXKKIRGFREVID 362
           ++D SDD LPL +P+KSGT  AVRIVLANSKEDKD              KKIRGFREVID
Sbjct: 255 VLDYSDDLLPLPIPTKSGTIHAVRIVLANSKEDKDLLERELRNLEEEESKKIRGFREVID 314

Query: 363 LISASQRPVISHNCLNDCTLIHSKFIAPLPPEVDEFV 473
           LISASQ+PVISHNCLNDCTLIHSKFIAPLPPE+DEFV
Sbjct: 315 LISASQKPVISHNCLNDCTLIHSKFIAPLPPEIDEFV 351


>ref|XP_003622727.1| Poly(A)-specific ribonuclease PARN-like protein [Medicago
           truncatula] gi|355497742|gb|AES78945.1| Poly(A)-specific
           ribonuclease PARN-like protein [Medicago truncatula]
          Length = 513

 Score =  217 bits (553), Expect = 7e-55
 Identities = 113/184 (61%), Positives = 128/184 (69%), Gaps = 27/184 (14%)
 Frame = +3

Query: 3   RSRIKHWRKRSNNSGTNTSKD---------------------------EELINSLRSIVL 101
           RSRIKHWR    NSGT TSKD                           +ELINS+R+I+ 
Sbjct: 63  RSRIKHWRNTCKNSGTKTSKDGKKIFSKFCTMRFFLGSPFILYHSFCADELINSIRNIIS 122

Query: 102 GREQFRSRPCLTIDVCSERQVQLILEMLVDSSDDFLPLLVPSKSGTTQAVRIVLANSKED 281
           G EQF+ RPCL +DVCS+RQVQLIL+M+VD SDD LPL++PSK GTTQAVR+VL  S+ED
Sbjct: 123 GSEQFKLRPCLNVDVCSDRQVQLILQMVVDFSDDLLPLVIPSKGGTTQAVRVVLTKSRED 182

Query: 282 KDXXXXXXXXXXXXXXKKIRGFREVIDLISASQRPVISHNCLNDCTLIHSKFIAPLPPEV 461
           K+              KKIRGFREVIDLISASQ+PVISHNCLNDCTLIHSKFIAPLP EV
Sbjct: 183 KEVLERELRSLEEEESKKIRGFREVIDLISASQKPVISHNCLNDCTLIHSKFIAPLPSEV 242

Query: 462 DEFV 473
           DEFV
Sbjct: 243 DEFV 246


>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis]
           gi|223533357|gb|EEF35108.1| ribonuclease, putative
           [Ricinus communis]
          Length = 624

 Score =  184 bits (466), Expect = 8e-45
 Identities = 91/157 (57%), Positives = 117/157 (74%), Gaps = 1/157 (0%)
 Frame = +3

Query: 3   RSRIKHWRKRSNNSGTNTSK-DEELINSLRSIVLGREQFRSRPCLTIDVCSERQVQLILE 179
           RSR+K+W+    N+ T+TS  DE L+ SLR +VLG E++ SRPC+ IDVCSERQV L++E
Sbjct: 203 RSRVKNWK----NACTDTSSTDEALVKSLRKLVLGLEEYNSRPCINIDVCSERQVHLVIE 258

Query: 180 MLVDSSDDFLPLLVPSKSGTTQAVRIVLANSKEDKDXXXXXXXXXXXXXXKKIRGFREVI 359
           ML + +DD +PL+VP+K G TQAVR+VL +SKED+D              KKIRGFREVI
Sbjct: 259 MLQEFADDLVPLIVPAKGGGTQAVRVVLTSSKEDRDLLQMELQNLEDEQNKKIRGFREVI 318

Query: 360 DLISASQRPVISHNCLNDCTLIHSKFIAPLPPEVDEF 470
           DLIS S++PV+SHN LND   IHSKF+APLPP ++EF
Sbjct: 319 DLISGSEKPVVSHNSLNDLAFIHSKFLAPLPPSMEEF 355


>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/160 (55%), Positives = 115/160 (71%), Gaps = 3/160 (1%)
 Frame = +3

Query: 3   RSRIKHWRKRSNNSGTNTSKDE---ELINSLRSIVLGREQFRSRPCLTIDVCSERQVQLI 173
           +S IK+W+K    + T    ++    L+ SLR +VLG E++ SRPC+ IDVCSERQ QL+
Sbjct: 201 KSHIKNWKKACKETSTRKEGNQIQDALVRSLRKLVLGNEEYDSRPCMNIDVCSERQAQLV 260

Query: 174 LEMLVDSSDDFLPLLVPSKSGTTQAVRIVLANSKEDKDXXXXXXXXXXXXXXKKIRGFRE 353
           +EML + +DD +PL++P+K G  QAVR+VL +SKEDKD              KK+RGFRE
Sbjct: 261 VEMLQEFADDVVPLIIPAKGGAMQAVRVVLTSSKEDKDLLQGKLQNDEQELKKKVRGFRE 320

Query: 354 VIDLISASQRPVISHNCLNDCTLIHSKFIAPLPPEVDEFV 473
           VIDLISASQ+PV+SH  LND T+IHSKFIAPLPP VDEF+
Sbjct: 321 VIDLISASQKPVVSHGSLNDLTVIHSKFIAPLPPTVDEFM 360


>gb|ABK95700.1| unknown [Populus trichocarpa]
          Length = 454

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/160 (55%), Positives = 115/160 (71%), Gaps = 3/160 (1%)
 Frame = +3

Query: 3   RSRIKHWRKRSNNSGTNTSKDE---ELINSLRSIVLGREQFRSRPCLTIDVCSERQVQLI 173
           +S IK+W+K    + T    ++    L+ SLR +VLG E++ SRPC+ IDVCSERQ QL+
Sbjct: 51  KSHIKNWKKACKETSTRKEGNQIQDALVRSLRKLVLGNEEYDSRPCMNIDVCSERQAQLV 110

Query: 174 LEMLVDSSDDFLPLLVPSKSGTTQAVRIVLANSKEDKDXXXXXXXXXXXXXXKKIRGFRE 353
           +EML + +DD +PL++P+K G  QAVR+VL +SKEDKD              KK+RGFRE
Sbjct: 111 VEMLQEFADDVVPLIIPAKGGAMQAVRVVLTSSKEDKDLLQGKLQNDEQELKKKVRGFRE 170

Query: 354 VIDLISASQRPVISHNCLNDCTLIHSKFIAPLPPEVDEFV 473
           VIDLISASQ+PV+SH  LND T+IHSKFIAPLPP VDEF+
Sbjct: 171 VIDLISASQKPVVSHGSLNDLTVIHSKFIAPLPPTVDEFM 210


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