BLASTX nr result

ID: Glycyrrhiza24_contig00017094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017094
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239616.1| uncharacterized protein LOC100804096 [Glycin...   170   1e-40
ref|XP_003542633.1| PREDICTED: auxin-responsive protein IAA12-li...   168   4e-40
ref|XP_003609384.1| Auxin-responsive protein IAA20 [Medicago tru...   152   4e-35
ref|XP_002308067.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
emb|CBI28230.3| unnamed protein product [Vitis vinifera]              134   6e-30

>ref|NP_001239616.1| uncharacterized protein LOC100804096 [Glycine max]
           gi|255640789|gb|ACU20678.1| unknown [Glycine max]
          Length = 199

 Score =  170 bits (430), Expect = 1e-40
 Identities = 89/141 (63%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
 Frame = -2

Query: 417 ITKSDEEEDGEALAGWPPVNY-WRKKLRSSGGGNYGDDEVEVAGNYDHHRHGCGGVTRSK 241
           ITK DEEE  E++ GWPPVNY WRKKLR            EV GN +++ H         
Sbjct: 68  ITKDDEEE--ESVVGWPPVNYHWRKKLRVD----------EVVGNNNNNNHMVSVADHRH 115

Query: 240 KSMYVKVKMEGVGIARKVDLTVHRSFHTLKETLMHMFGKCH-QQFNGYELAYQDKEGDWL 64
            S+YVKVKMEGVGIARKVDL++H+SFHTLK+TLM MFGKC+ QQ N YELAY DKEGDWL
Sbjct: 116 HSVYVKVKMEGVGIARKVDLSMHQSFHTLKQTLMDMFGKCNIQQSNNYELAYLDKEGDWL 175

Query: 63  LAEDVPWRSFIQCALRLKLLK 1
           LA+D+PWRSF+ CA RLKL+K
Sbjct: 176 LAQDLPWRSFVGCARRLKLVK 196


>ref|XP_003542633.1| PREDICTED: auxin-responsive protein IAA12-like [Glycine max]
          Length = 206

 Score =  168 bits (426), Expect = 4e-40
 Identities = 92/143 (64%), Positives = 103/143 (72%), Gaps = 4/143 (2%)
 Frame = -2

Query: 417 ITKSDEEEDGEALAGWPPVNYWRKKLRSS---GGGNYGDDEVEVAGNYDHHRHGCGGVTR 247
           ITK DEEE+G  + GWPPVN+WRKKL      G  N  D  V V     H   G      
Sbjct: 69  ITK-DEEEEG--VVGWPPVNHWRKKLHVEEVVGNNNNIDHMVWVDHRQTHSLQGY----- 120

Query: 246 SKKSMYVKVKMEGVGIARKVDLTVHRSFHTLKETLMHMFGKC-HQQFNGYELAYQDKEGD 70
           S  ++YVKVKMEGVGIARKVDL++H+SFHTLKETLM MFGKC HQQ N YELAY DKEGD
Sbjct: 121 SSNTLYVKVKMEGVGIARKVDLSMHQSFHTLKETLMDMFGKCHHQQSNNYELAYLDKEGD 180

Query: 69  WLLAEDVPWRSFIQCALRLKLLK 1
           WLLA+DVPWRSF+ CA RLKL+K
Sbjct: 181 WLLAQDVPWRSFVGCARRLKLVK 203


>ref|XP_003609384.1| Auxin-responsive protein IAA20 [Medicago truncatula]
           gi|355510439|gb|AES91581.1| Auxin-responsive protein
           IAA20 [Medicago truncatula]
          Length = 537

 Score =  152 bits (383), Expect = 4e-35
 Identities = 81/141 (57%), Positives = 97/141 (68%)
 Frame = -2

Query: 423 TIITKSDEEEDGEALAGWPPVNYWRKKLRSSGGGNYGDDEVEVAGNYDHHRHGCGGVTRS 244
           T ITKS+E+++ EAL GWPPVN  RKKLR +   +  D  V + G+++H           
Sbjct: 80  TTITKSNEDDE-EALVGWPPVNCRRKKLRCNEN-DVEDHVVPIDGSHNHRN--------- 128

Query: 243 KKSMYVKVKMEGVGIARKVDLTVHRSFHTLKETLMHMFGKCHQQFNGYELAYQDKEGDWL 64
               YVKVKMEGVGIARKV+L +H SFHTL +TLM MF KC      YEL YQDKEGDWL
Sbjct: 129 ----YVKVKMEGVGIARKVNLGMHHSFHTLNQTLMDMFEKCDHDQQQYELVYQDKEGDWL 184

Query: 63  LAEDVPWRSFIQCALRLKLLK 1
           LA+D+ WRSFI+CA RLKLLK
Sbjct: 185 LAQDISWRSFIECAQRLKLLK 205


>ref|XP_002308067.1| predicted protein [Populus trichocarpa] gi|222854043|gb|EEE91590.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/137 (51%), Positives = 89/137 (64%)
 Frame = -2

Query: 411 KSDEEEDGEALAGWPPVNYWRKKLRSSGGGNYGDDEVEVAGNYDHHRHGCGGVTRSKKSM 232
           KSD E DG  + GWPP+ + RKKL            +EV    D+    C    RS  SM
Sbjct: 103 KSDGESDG--IVGWPPIKFKRKKL-----SRQNSRVLEVNRAVDNGCEDCQA--RSSNSM 153

Query: 231 YVKVKMEGVGIARKVDLTVHRSFHTLKETLMHMFGKCHQQFNGYELAYQDKEGDWLLAED 52
           Y+KVKMEGVGIARK+D++V+R F TLK TL+ MFG C +  + Y L YQD+EGDWLLAED
Sbjct: 154 YIKVKMEGVGIARKIDVSVYRCFPTLKHTLLDMFGICQENSSNYRLTYQDREGDWLLAED 213

Query: 51  VPWRSFIQCALRLKLLK 1
           VPWR+F+    RLKL++
Sbjct: 214 VPWRNFLGSVQRLKLMR 230


>emb|CBI28230.3| unnamed protein product [Vitis vinifera]
          Length = 184

 Score =  134 bits (338), Expect = 6e-30
 Identities = 69/134 (51%), Positives = 89/134 (66%)
 Frame = -2

Query: 402 EEEDGEALAGWPPVNYWRKKLRSSGGGNYGDDEVEVAGNYDHHRHGCGGVTRSKKSMYVK 223
           + +DG  + GWPP+ + RKK+ S    N  D++  V  N        GGV  + K  YVK
Sbjct: 53  KNDDGYCIVGWPPIKFRRKKICSH---NRDDNDRTVLHNGSARAGVGGGVNPNSK--YVK 107

Query: 222 VKMEGVGIARKVDLTVHRSFHTLKETLMHMFGKCHQQFNGYELAYQDKEGDWLLAEDVPW 43
           VKM GVGIARK+DL+ H S+ TL  TL++MFGKC Q    ++LAYQD+EGDWLLA DVPW
Sbjct: 108 VKMVGVGIARKIDLSRHHSYQTLTNTLINMFGKCQQDAQSFKLAYQDREGDWLLAGDVPW 167

Query: 42  RSFIQCALRLKLLK 1
           R+FIQ   RLK+L+
Sbjct: 168 RTFIQSVERLKILR 181


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